RNA–Protein interactions for RNA: ENST00000618048.2

KCNMA1-224, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

TSL 1 (best) BASIC

Gene KCNMA1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-224	ENST00000618048	NKTR	P30414	1462 aa	Known RBP	32.96	■■■□□ 2.87
KCNMA1-224	ENST00000618048	ZFYVE9	O95405	1425 aa		32.95	■■■□□ 2.87
KCNMA1-224	ENST00000618048	MYO5B	Q9ULV0	1848 aa		32.94	■■■□□ 2.86
KCNMA1-224	ENST00000618048	BCAN	Q96GW7	911 aa		32.94	■■■□□ 2.86
KCNMA1-224	ENST00000618048	TMEM131L	A2VDJ0	1609 aa		32.93	■■■□□ 2.86
KCNMA1-224	ENST00000618048	PROSER2	Q86WR7	435 aa	Predicted RBP	32.93	■■■□□ 2.86
KCNMA1-224	ENST00000618048	FAM135B	Q49AJ0	1406 aa		32.92	■■■□□ 2.86
KCNMA1-224	ENST00000618048	PLEKHG1	Q9ULL1	1385 aa		32.91	■■■□□ 2.86
KCNMA1-224	ENST00000618048	RIMS2	Q9UQ26	1411 aa		32.91	■■■□□ 2.86
KCNMA1-224	ENST00000618048		E9PCH4	1651 aa		32.9	■■■□□ 2.86
KCNMA1-224	ENST00000618048	IQGAP3	Q86VI3	1631 aa		32.89	■■■□□ 2.86
KCNMA1-224	ENST00000618048	PPP1R15A	O75807	674 aa	Predicted RBP	32.89	■■■□□ 2.86
KCNMA1-224	ENST00000618048	HDGF	P51858	240 aa	Known RBP	32.87	■■■□□ 2.85
KCNMA1-224	ENST00000618048	RBM33	Q96EV2	1170 aa	Known RBP	32.86	■■■□□ 2.85
KCNMA1-224	ENST00000618048	ROBO1	Q9Y6N7	1651 aa		32.84	■■■□□ 2.85
KCNMA1-224	ENST00000618048	CHGA	P10645	457 aa	Known RBP	32.83	■■■□□ 2.85
KCNMA1-224	ENST00000618048	MSH6	P52701	1360 aa		32.82	■■■□□ 2.84
KCNMA1-224	ENST00000618048	CHD2	O14647	1828 aa	Known RBP	32.81	■■■□□ 2.84
KCNMA1-224	ENST00000618048	ITGAE	P38570	1179 aa		32.8	■■■□□ 2.84
KCNMA1-224	ENST00000618048	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.8	■■■□□ 2.84
KCNMA1-224	ENST00000618048	NUP155	O75694	1391 aa		32.8	■■■□□ 2.84
KCNMA1-224	ENST00000618048	TBX22	Q9Y458	520 aa		32.76	■■■□□ 2.83
KCNMA1-224	ENST00000618048	DIP2A	Q14689	1571 aa		32.75	■■■□□ 2.83
KCNMA1-224	ENST00000618048	ADAMTS13	Q76LX8	1427 aa		32.72	■■■□□ 2.83
KCNMA1-224	ENST00000618048	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.72	■■■□□ 2.83
KCNMA1-224	ENST00000618048	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.71	■■■□□ 2.83
KCNMA1-224	ENST00000618048	SLAIN2	Q9P270	581 aa		32.69	■■■□□ 2.82
KCNMA1-224	ENST00000618048	NCOA3	Q9Y6Q9	1424 aa		32.68	■■■□□ 2.82
KCNMA1-224	ENST00000618048	PIK3R4	Q99570	1358 aa		32.67	■■■□□ 2.82
KCNMA1-224	ENST00000618048	RGS17	Q9UGC6	210 aa	Predicted RBP	32.66	■■■□□ 2.82
KCNMA1-224	ENST00000618048	PHLPP1	O60346	1717 aa		32.64	■■■□□ 2.82
KCNMA1-224	ENST00000618048	TRPM2	O94759	1503 aa		32.64	■■■□□ 2.82
KCNMA1-224	ENST00000618048	SPHKAP	Q2M3C7	1700 aa		32.64	■■■□□ 2.82
KCNMA1-224	ENST00000618048	C14orf37	Q86TY3	774 aa		32.63	■■■□□ 2.81
KCNMA1-224	ENST00000618048	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	32.56	■■■□□ 2.8
KCNMA1-224	ENST00000618048	JCAD	Q9P266	1359 aa		32.56	■■■□□ 2.8
KCNMA1-224	ENST00000618048	SETBP1	Q9Y6X0	1596 aa		32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	PTPRU	Q92729	1446 aa		32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	RRBP1	Q9P2E9	1410 aa	Known RBP	32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	CADPS2	Q86UW7	1296 aa		32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	C19orf44	Q9H6X5	657 aa		32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	COL16A1	Q07092	1604 aa	Predicted RBP	32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	NRXN3	Q9Y4C0	1643 aa		32.54	■■■□□ 2.8
KCNMA1-224	ENST00000618048	AMOTL2	Q9Y2J4	779 aa		32.53	■■■□□ 2.8
KCNMA1-224	ENST00000618048	ATF3	P18847	181 aa		32.51	■■■□□ 2.79
KCNMA1-224	ENST00000618048	ZNF326	Q5BKZ1	582 aa	Known RBP	32.5	■■■□□ 2.79
KCNMA1-224	ENST00000618048	XRN1	Q8IZH2	1706 aa	Known RBP	32.49	■■■□□ 2.79
KCNMA1-224	ENST00000618048	CLTCL1	P53675	1640 aa		32.48	■■■□□ 2.79
KCNMA1-224	ENST00000618048	POTEA	Q6S8J7	498 aa		32.48	■■■□□ 2.79
KCNMA1-224	ENST00000618048	NAIP	Q13075	1403 aa		32.48	■■■□□ 2.79
KCNMA1-224	ENST00000618048	AHDC1	Q5TGY3	1603 aa	Predicted RBP	32.47	■■■□□ 2.79
KCNMA1-224	ENST00000618048	DCC	P43146	1447 aa		32.44	■■■□□ 2.78
KCNMA1-224	ENST00000618048	NEXMIF	Q5QGS0	1516 aa		32.43	■■■□□ 2.78
KCNMA1-224	ENST00000618048	MET	P08581	1390 aa		32.4	■■■□□ 2.78
KCNMA1-224	ENST00000618048	SPATA31A6	Q5VVP1	1343 aa		32.39	■■■□□ 2.78
KCNMA1-224	ENST00000618048	KIF1B	O60333	1816 aa		32.38	■■■□□ 2.77
KCNMA1-224	ENST00000618048	SHPRH	Q149N8	1683 aa		32.37	■■■□□ 2.77
KCNMA1-224	ENST00000618048	LRP6	O75581	1613 aa		32.37	■■■□□ 2.77
KCNMA1-224	ENST00000618048	BRINP3	Q76B58	766 aa		32.37	■■■□□ 2.77
KCNMA1-224	ENST00000618048	HFM1	A2PYH4	1435 aa		32.35	■■■□□ 2.77
KCNMA1-224	ENST00000618048	ASXL1	Q8IXJ9	1541 aa		32.34	■■■□□ 2.77
KCNMA1-224	ENST00000618048	MST1R	Q04912	1400 aa		32.33	■■■□□ 2.77
KCNMA1-224	ENST00000618048	MEX3C	Q5U5Q3	659 aa	Known RBP	32.31	■■■□□ 2.76
KCNMA1-224	ENST00000618048	TRIM52	Q96A61	297 aa		32.31	■■■□□ 2.76
KCNMA1-224	ENST00000618048	ADGRL3	Q9HAR2	1447 aa		32.31	■■■□□ 2.76
KCNMA1-224	ENST00000618048	NALCN	Q8IZF0	1738 aa		32.27	■■■□□ 2.76
KCNMA1-224	ENST00000618048	NHSL1	Q5SYE7	1610 aa		32.26	■■■□□ 2.75
KCNMA1-224	ENST00000618048	SETD1A	O15047	1707 aa	Known RBP	32.25	■■■□□ 2.75
KCNMA1-224	ENST00000618048	VGF	O15240	615 aa	Predicted RBP	32.24	■■■□□ 2.75
KCNMA1-224	ENST00000618048	SLC4A1AP	Q9BWU0	796 aa	Known RBP	32.24	■■■□□ 2.75
KCNMA1-224	ENST00000618048	SETD5	Q9C0A6	1442 aa		32.23	■■■□□ 2.75
KCNMA1-224	ENST00000618048	ZNF772	Q68DY9	489 aa	Predicted RBP	32.22	■■■□□ 2.75
KCNMA1-224	ENST00000618048	PTCH1	Q13635	1447 aa		32.22	■■■□□ 2.75
KCNMA1-224	ENST00000618048	RPGRIP1L	Q68CZ1	1315 aa		32.19	■■■□□ 2.74
KCNMA1-224	ENST00000618048	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.17	■■■□□ 2.74
KCNMA1-224	ENST00000618048	NUTM2E	B1AL46	878 aa	Predicted RBP	32.17	■■■□□ 2.74
KCNMA1-224	ENST00000618048	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.17	■■■□□ 2.74
KCNMA1-224	ENST00000618048	PPL	O60437	1756 aa		32.16	■■■□□ 2.74
KCNMA1-224	ENST00000618048	PRAG1	Q86YV5	1406 aa		32.16	■■■□□ 2.74
KCNMA1-224	ENST00000618048	ROBO2	Q9HCK4	1378 aa		32.15	■■■□□ 2.74
KCNMA1-224	ENST00000618048	LRRC59	Q96AG4	307 aa	Known RBP	32.14	■■■□□ 2.74
KCNMA1-224	ENST00000618048	C1orf167	Q5SNV9	1468 aa		32.13	■■■□□ 2.73
KCNMA1-224	ENST00000618048	DDX17	Q92841	729 aa	Known RBP	32.11	■■■□□ 2.73
KCNMA1-224	ENST00000618048	PNPLA6	Q8IY17	1366 aa		32.08	■■■□□ 2.73
KCNMA1-224	ENST00000618048	FOXD1	Q16676	465 aa		32.07	■■■□□ 2.72
KCNMA1-224	ENST00000618048	LAMC1	P11047	1609 aa		32.06	■■■□□ 2.72
KCNMA1-224	ENST00000618048	CCDC144A	A2RUR9	1427 aa		32.06	■■■□□ 2.72
KCNMA1-224	ENST00000618048	AFF2	P51816	1311 aa		32.05	■■■□□ 2.72
KCNMA1-224	ENST00000618048	RXRB	P28702	533 aa		32.03	■■■□□ 2.72
KCNMA1-224	ENST00000618048	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.01	■■■□□ 2.71
KCNMA1-224	ENST00000618048	ORAI2	Q96SN7	254 aa		32	■■■□□ 2.71
KCNMA1-224	ENST00000618048	C8orf37	Q96NL8	207 aa		31.98	■■■□□ 2.71
KCNMA1-224	ENST00000618048	SPATA31E1	Q6ZUB1	1445 aa		31.98	■■■□□ 2.71
KCNMA1-224	ENST00000618048	CDC42BPG	Q6DT37	1551 aa		31.98	■■■□□ 2.71
KCNMA1-224	ENST00000618048	ADGRF5	Q8IZF2	1346 aa		31.98	■■■□□ 2.71
KCNMA1-224	ENST00000618048	SOS2	Q07890	1332 aa	Predicted RBP	31.97	■■■□□ 2.71
KCNMA1-224	ENST00000618048	MPHOSPH9	Q99550	1183 aa		31.96	■■■□□ 2.71
KCNMA1-224	ENST00000618048	IFT172	Q9UG01	1749 aa		31.96	■■■□□ 2.71
KCNMA1-224	ENST00000618048	ANKRD30B	Q9BXX2	1392 aa		31.95	■■■□□ 2.71
KCNMA1-224	ENST00000618048	RGL3	Q3MIN7	710 aa		31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms