RNA–Protein interactions for RNA: ENST00000617791.1

MALAT1-211, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 5 BASIC

Gene MALAT1, Length 394 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-211ENST00000617791 TMEM94Q12767 1356 aa23.61■■□□□ 1.37
MALAT1-211ENST00000617791 UNC13BO14795 1591 aa23.61■■□□□ 1.37
MALAT1-211ENST00000617791 CHGAP10645 457 aaKnown RBP23.6■■□□□ 1.37
MALAT1-211ENST00000617791 PROSER2Q86WR7 435 aaPredicted RBP23.59■■□□□ 1.37
MALAT1-211ENST00000617791 RBM33Q96EV2 1170 aaKnown RBP23.58■■□□□ 1.37
MALAT1-211ENST00000617791 XIRP1Q702N8 1843 aaKnown RBP23.58■■□□□ 1.37
MALAT1-211ENST00000617791 GCC2Q8IWJ2 1684 aa23.57■■□□□ 1.36
MALAT1-211ENST00000617791 HDGFP51858 240 aaKnown RBP23.57■■□□□ 1.36
MALAT1-211ENST00000617791 RIMS2Q9UQ26 1411 aa23.57■■□□□ 1.36
MALAT1-211ENST00000617791 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
MALAT1-211ENST00000617791 NUP155O75694 1391 aa23.54■■□□□ 1.36
MALAT1-211ENST00000617791 PLEKHG1Q9ULL1 1385 aa23.54■■□□□ 1.36
MALAT1-211ENST00000617791 TMEM131LA2VDJ0 1609 aa23.52■■□□□ 1.36
MALAT1-211ENST00000617791 E9PCH4 1651 aa23.52■■□□□ 1.36
MALAT1-211ENST00000617791 NKTRP30414 1462 aaKnown RBP23.52■■□□□ 1.36
MALAT1-211ENST00000617791 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
MALAT1-211ENST00000617791 IQGAP3Q86VI3 1631 aa23.51■■□□□ 1.35
MALAT1-211ENST00000617791 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.51■■□□□ 1.35
MALAT1-211ENST00000617791 NWD1Q149M9 1564 aa23.5■■□□□ 1.35
MALAT1-211ENST00000617791 NUTM2DQ5VT03 806 aaPredicted RBP23.5■■□□□ 1.35
MALAT1-211ENST00000617791 FAM135BQ49AJ0 1406 aa23.5■■□□□ 1.35
MALAT1-211ENST00000617791 MSH6P52701 1360 aa23.48■■□□□ 1.35
MALAT1-211ENST00000617791 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
MALAT1-211ENST00000617791 ROBO1Q9Y6N7 1651 aa23.42■■□□□ 1.34
MALAT1-211ENST00000617791 C14orf37Q86TY3 774 aa23.42■■□□□ 1.34
MALAT1-211ENST00000617791 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
MALAT1-211ENST00000617791 ADAMTS13Q76LX8 1427 aa23.4■■□□□ 1.34
MALAT1-211ENST00000617791 CHD2O14647 1828 aaKnown RBP23.4■■□□□ 1.34
MALAT1-211ENST00000617791 ZNF326Q5BKZ1 582 aaKnown RBP23.37■■□□□ 1.33
MALAT1-211ENST00000617791 DIP2AQ14689 1571 aa23.36■■□□□ 1.33
MALAT1-211ENST00000617791 PIK3R4Q99570 1358 aa23.35■■□□□ 1.33
MALAT1-211ENST00000617791 RRBP1Q9P2E9 1410 aaKnown RBP23.34■■□□□ 1.33
MALAT1-211ENST00000617791 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.32
MALAT1-211ENST00000617791 TRPM2O94759 1503 aa23.33■■□□□ 1.32
MALAT1-211ENST00000617791 NCOA3Q9Y6Q9 1424 aa23.33■■□□□ 1.32
MALAT1-211ENST00000617791 RGS17Q9UGC6 210 aaPredicted RBP23.32■■□□□ 1.32
MALAT1-211ENST00000617791 AMOTL2Q9Y2J4 779 aa23.32■■□□□ 1.32
MALAT1-211ENST00000617791 ATF3P18847 181 aa23.3■■□□□ 1.32
MALAT1-211ENST00000617791 C19orf44Q9H6X5 657 aa23.3■■□□□ 1.32
MALAT1-211ENST00000617791 NAIPQ13075 1403 aa23.3■■□□□ 1.32
MALAT1-211ENST00000617791 CADPS2Q86UW7 1296 aa23.29■■□□□ 1.32
MALAT1-211ENST00000617791 PHLPP1O60346 1717 aa23.28■■□□□ 1.32
MALAT1-211ENST00000617791 PTPRUQ92729 1446 aa23.28■■□□□ 1.32
MALAT1-211ENST00000617791 TRIM52Q96A61 297 aa23.27■■□□□ 1.32
MALAT1-211ENST00000617791 JCADQ9P266 1359 aa23.26■■□□□ 1.31
MALAT1-211ENST00000617791 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.25■■□□□ 1.31
MALAT1-211ENST00000617791 SETBP1Q9Y6X0 1596 aa23.24■■□□□ 1.31
MALAT1-211ENST00000617791 CLTCL1P53675 1640 aa23.24■■□□□ 1.31
MALAT1-211ENST00000617791 NRXN3Q9Y4C0 1643 aa23.22■■□□□ 1.31
MALAT1-211ENST00000617791 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
MALAT1-211ENST00000617791 METP08581 1390 aa23.21■■□□□ 1.31
MALAT1-211ENST00000617791 HFM1A2PYH4 1435 aa23.2■■□□□ 1.3
MALAT1-211ENST00000617791 COL16A1Q07092 1604 aaPredicted RBP23.19■■□□□ 1.3
MALAT1-211ENST00000617791 SLC4A1APQ9BWU0 796 aaKnown RBP23.19■■□□□ 1.3
MALAT1-211ENST00000617791 XRN1Q8IZH2 1706 aaKnown RBP23.19■■□□□ 1.3
MALAT1-211ENST00000617791 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
MALAT1-211ENST00000617791 BRINP3Q76B58 766 aa23.17■■□□□ 1.3
MALAT1-211ENST00000617791 DCCP43146 1447 aa23.16■■□□□ 1.3
MALAT1-211ENST00000617791 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
MALAT1-211ENST00000617791 KIF1BO60333 1816 aa23.15■■□□□ 1.3
MALAT1-211ENST00000617791 MEX3CQ5U5Q3 659 aaKnown RBP23.14■■□□□ 1.29
MALAT1-211ENST00000617791 SPATA31A6Q5VVP1 1343 aa23.13■■□□□ 1.29
MALAT1-211ENST00000617791 VGFO15240 615 aaPredicted RBP23.13■■□□□ 1.29
MALAT1-211ENST00000617791 MST1RQ04912 1400 aa23.1■■□□□ 1.29
MALAT1-211ENST00000617791 ADGRL3Q9HAR2 1447 aa23.1■■□□□ 1.29
MALAT1-211ENST00000617791 ASXL1Q8IXJ9 1541 aa23.1■■□□□ 1.29
MALAT1-211ENST00000617791 LRP6O75581 1613 aa23.1■■□□□ 1.29
MALAT1-211ENST00000617791 RPGRIP1LQ68CZ1 1315 aa23.08■■□□□ 1.28
MALAT1-211ENST00000617791 NUTM2BA6NNL0 878 aaPredicted RBP23.07■■□□□ 1.28
MALAT1-211ENST00000617791 NUTM2EB1AL46 878 aaPredicted RBP23.07■■□□□ 1.28
MALAT1-211ENST00000617791 NUTM2AQ8IVF1 878 aaPredicted RBP23.07■■□□□ 1.28
MALAT1-211ENST00000617791 SHPRHQ149N8 1683 aa23.06■■□□□ 1.28
MALAT1-211ENST00000617791 NALCNQ8IZF0 1738 aa23.03■■□□□ 1.28
MALAT1-211ENST00000617791 ZNF772Q68DY9 489 aaPredicted RBP23.03■■□□□ 1.28
MALAT1-211ENST00000617791 DDX17Q92841 729 aaKnown RBP23.03■■□□□ 1.28
MALAT1-211ENST00000617791 ROBO2Q9HCK4 1378 aa23.02■■□□□ 1.28
MALAT1-211ENST00000617791 PTCH1Q13635 1447 aa23.02■■□□□ 1.28
MALAT1-211ENST00000617791 LRRC59Q96AG4 307 aaKnown RBP23.01■■□□□ 1.27
MALAT1-211ENST00000617791 SETD5Q9C0A6 1442 aa23■■□□□ 1.27
MALAT1-211ENST00000617791 CCDC144AA2RUR9 1427 aa22.99■■□□□ 1.27
MALAT1-211ENST00000617791 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
MALAT1-211ENST00000617791 NHSL1Q5SYE7 1610 aa22.99■■□□□ 1.27
MALAT1-211ENST00000617791 SETD1AO15047 1707 aaKnown RBP22.99■■□□□ 1.27
MALAT1-211ENST00000617791 MPHOSPH9Q99550 1183 aa22.98■■□□□ 1.27
MALAT1-211ENST00000617791 PPLO60437 1756 aa22.98■■□□□ 1.27
MALAT1-211ENST00000617791 C1orf167Q5SNV9 1468 aa22.98■■□□□ 1.27
MALAT1-211ENST00000617791 ADGRF5Q8IZF2 1346 aa22.94■■□□□ 1.26
MALAT1-211ENST00000617791 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
MALAT1-211ENST00000617791 PRAG1Q86YV5 1406 aa22.93■■□□□ 1.26
MALAT1-211ENST00000617791 PNPLA6Q8IY17 1366 aa22.93■■□□□ 1.26
MALAT1-211ENST00000617791 AFF2P51816 1311 aa22.93■■□□□ 1.26
MALAT1-211ENST00000617791 RXRBP28702 533 aa22.91■■□□□ 1.26
MALAT1-211ENST00000617791 C8orf37Q96NL8 207 aa22.91■■□□□ 1.26
MALAT1-211ENST00000617791 STK26Q9P289 416 aa22.91■■□□□ 1.26
MALAT1-211ENST00000617791 SPATA31E1Q6ZUB1 1445 aa22.91■■□□□ 1.26
MALAT1-211ENST00000617791 ANKRD30BQ9BXX2 1392 aa22.9■■□□□ 1.26
MALAT1-211ENST00000617791 ADAMTS2O95450 1211 aa22.88■■□□□ 1.25
MALAT1-211ENST00000617791 SOS2Q07890 1332 aaPredicted RBP22.86■■□□□ 1.25
MALAT1-211ENST00000617791 ESCO1Q5FWF5 840 aa22.85■■□□□ 1.25
MALAT1-211ENST00000617791 TMEM132EQ6IEE7 984 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms