RNA–Protein interactions for RNA: ENST00000617219.1

CFHR3-206, Transcript of complement factor H related 3, humanhuman

TSL 5 BASIC

Gene CFHR3, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-206ENST00000617219 MINK1Q8N4C8 1332 aaPredicted RBP8.73□□□□□ -1.01
CFHR3-206ENST00000617219 MYO15BQ96JP2 1530 aa8.72□□□□□ -1.01
CFHR3-206ENST00000617219 PADI6Q6TGC4 694 aa8.72□□□□□ -1.01
CFHR3-206ENST00000617219 ONECUT3O60422 494 aaPredicted RBP8.71□□□□□ -1.01
CFHR3-206ENST00000617219 NYAP1Q6ZVC0 841 aa8.71□□□□□ -1.01
CFHR3-206ENST00000617219 PACS2Q86VP3 889 aa8.71□□□□□ -1.01
CFHR3-206ENST00000617219 MRPL50Q8N5N7 158 aaKnown RBP8.71□□□□□ -1.01
CFHR3-206ENST00000617219 TRIM6-TRIM34B2RNG4 842 aa8.7□□□□□ -1.02
CFHR3-206ENST00000617219 PKDCCQ504Y2 493 aa8.7□□□□□ -1.02
CFHR3-206ENST00000617219 LCE3BQ5TA77 95 aa8.7□□□□□ -1.02
CFHR3-206ENST00000617219 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
CFHR3-206ENST00000617219 DGAT1O75907 488 aa8.7□□□□□ -1.02
CFHR3-206ENST00000617219 SLC24A3Q9HC58 644 aa8.7□□□□□ -1.02
CFHR3-206ENST00000617219 NBPF26B4DH59 902 aa8.69□□□□□ -1.02
CFHR3-206ENST00000617219 FECHP22830 423 aa8.69□□□□□ -1.02
CFHR3-206ENST00000617219 AK7Q96M32 723 aa8.69□□□□□ -1.02
CFHR3-206ENST00000617219 IRF6O14896 467 aa8.68□□□□□ -1.02
CFHR3-206ENST00000617219 OATP04181 439 aa8.68□□□□□ -1.02
CFHR3-206ENST00000617219 PROX2Q3B8N5 592 aa8.68□□□□□ -1.02
CFHR3-206ENST00000617219 TTC13Q8NBP0 860 aa8.68□□□□□ -1.02
CFHR3-206ENST00000617219 UNC13AQ9UPW8 1703 aa8.68□□□□□ -1.02
CFHR3-206ENST00000617219 RABGEF1Q9UJ41 708 aa8.67□□□□□ -1.02
CFHR3-206ENST00000617219 TSKSQ9UJT2 592 aa8.67□□□□□ -1.02
CFHR3-206ENST00000617219 DCAF1Q9Y4B6 1507 aa8.67□□□□□ -1.02
CFHR3-206ENST00000617219 KRTAP4-8A0A0G2JLE6 195 aa8.66□□□□□ -1.02
CFHR3-206ENST00000617219 RBM46Q8TBY0 533 aaKnown RBP8.66□□□□□ -1.02
CFHR3-206ENST00000617219 CCDC102AQ96A19 550 aa8.66□□□□□ -1.02
CFHR3-206ENST00000617219 NBPF3Q9H094 633 aa8.65□□□□□ -1.02
CFHR3-206ENST00000617219 KIAA1468Q9P260 1216 aa8.65□□□□□ -1.02
CFHR3-206ENST00000617219 PNMA3Q9UL41 463 aa8.65□□□□□ -1.02
CFHR3-206ENST00000617219 BICRAQ9NZM4 1560 aa8.65□□□□□ -1.02
CFHR3-206ENST00000617219 KCTD17Q8N5Z5 321 aa8.64□□□□□ -1.03
CFHR3-206ENST00000617219 ADGRG1Q9Y653 693 aa8.64□□□□□ -1.03
CFHR3-206ENST00000617219 TATDN2Q93075 761 aa8.64□□□□□ -1.03
CFHR3-206ENST00000617219 FAM198AQ9UFP1 575 aa8.64□□□□□ -1.03
CFHR3-206ENST00000617219 NUDT18Q6ZVK8 323 aa8.63□□□□□ -1.03
CFHR3-206ENST00000617219 SCRIBQ14160 1630 aa8.62□□□□□ -1.03
CFHR3-206ENST00000617219 FAM161AQ3B820 660 aa8.61□□□□□ -1.03
CFHR3-206ENST00000617219 LCE2CQ5TA81 110 aa8.61□□□□□ -1.03
CFHR3-206ENST00000617219 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
CFHR3-206ENST00000617219 PXYLP1Q8TE99 480 aa8.61□□□□□ -1.03
CFHR3-206ENST00000617219 KRTAP9-9Q9BYP9 154 aa8.61□□□□□ -1.03
CFHR3-206ENST00000617219 KRTAP9-4Q9BYQ2 154 aa8.61□□□□□ -1.03
CFHR3-206ENST00000617219 TRIM66O15016 1216 aa8.6□□□□□ -1.03
CFHR3-206ENST00000617219 LAPTM4BQ86VI4 370 aa8.6□□□□□ -1.03
CFHR3-206ENST00000617219 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.59□□□□□ -1.03
CFHR3-206ENST00000617219 BTBD11A6QL63 1104 aa8.59□□□□□ -1.03
CFHR3-206ENST00000617219 HDGFP51858 240 aaKnown RBP8.59□□□□□ -1.03
CFHR3-206ENST00000617219 EYA1Q99502 592 aa8.59□□□□□ -1.03
CFHR3-206ENST00000617219 SMAPO00193 183 aa8.58□□□□□ -1.04
CFHR3-206ENST00000617219 DNAJB2P25686 324 aa8.58□□□□□ -1.04
CFHR3-206ENST00000617219 FAM98CQ17RN3 349 aaKnown RBP8.58□□□□□ -1.04
CFHR3-206ENST00000617219 SEPT9Q9UHD8 586 aaPredicted RBP8.58□□□□□ -1.04
CFHR3-206ENST00000617219 AMHR2Q16671 573 aa8.57□□□□□ -1.04
CFHR3-206ENST00000617219 RCCD1A6NED2 376 aa8.57□□□□□ -1.04
CFHR3-206ENST00000617219 CLCN1P35523 988 aa8.57□□□□□ -1.04
CFHR3-206ENST00000617219 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
CFHR3-206ENST00000617219 PDE4DQ08499 809 aa8.57□□□□□ -1.04
CFHR3-206ENST00000617219 TTLL12Q14166 644 aaPredicted RBP8.57□□□□□ -1.04
CFHR3-206ENST00000617219 C3orf80F5H4A9 247 aa8.55□□□□□ -1.04
CFHR3-206ENST00000617219 NEUROD2Q15784 382 aa8.55□□□□□ -1.04
CFHR3-206ENST00000617219 ZSCAN1Q8NBB4 408 aa8.55□□□□□ -1.04
CFHR3-206ENST00000617219 ANKK1Q8NFD2 765 aa8.55□□□□□ -1.04
CFHR3-206ENST00000617219 MDM2Q00987 491 aaPredicted RBP8.54□□□□□ -1.04
CFHR3-206ENST00000617219 GPCPD1Q9NPB8 672 aa8.54□□□□□ -1.04
CFHR3-206ENST00000617219 LORP23490 312 aaPredicted RBP8.53□□□□□ -1.04
CFHR3-206ENST00000617219 ZFRQ96KR1 1074 aaKnown RBP8.53□□□□□ -1.04
CFHR3-206ENST00000617219 PHOX2BQ99453 314 aa8.53□□□□□ -1.04
CFHR3-206ENST00000617219 TMEM134Q9H6X4 195 aa8.52□□□□□ -1.05
CFHR3-206ENST00000617219 DAXXQ9UER7 740 aaPredicted RBP8.52□□□□□ -1.05
CFHR3-206ENST00000617219 RSPH4AQ5TD94 716 aa8.51□□□□□ -1.05
CFHR3-206ENST00000617219 TRIM67Q6ZTA4 783 aa8.51□□□□□ -1.05
CFHR3-206ENST00000617219 SULF1Q8IWU6 871 aa8.51□□□□□ -1.05
CFHR3-206ENST00000617219 PARP9Q8IXQ6 854 aa8.51□□□□□ -1.05
CFHR3-206ENST00000617219 NLRP7Q8WX94 980 aa8.51□□□□□ -1.05
CFHR3-206ENST00000617219 LRCH3Q96II8 777 aa8.51□□□□□ -1.05
CFHR3-206ENST00000617219 SWT1Q5T5J6 900 aaKnown RBP8.5□□□□□ -1.05
CFHR3-206ENST00000617219 PPP1R18Q6NYC8 613 aa8.5□□□□□ -1.05
CFHR3-206ENST00000617219 SLF2Q8IX21 1173 aa8.5□□□□□ -1.05
CFHR3-206ENST00000617219 NECTIN2Q92692 538 aa8.5□□□□□ -1.05
CFHR3-206ENST00000617219 AAASQ9NRG9 546 aa8.5□□□□□ -1.05
CFHR3-206ENST00000617219 BRPF1P55201 1214 aaPredicted RBP8.49□□□□□ -1.05
CFHR3-206ENST00000617219 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
CFHR3-206ENST00000617219 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
CFHR3-206ENST00000617219 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.49□□□□□ -1.05
CFHR3-206ENST00000617219 SHROOM4Q9ULL8 1493 aa8.49□□□□□ -1.05
CFHR3-206ENST00000617219 RNF40O75150 1001 aa8.48□□□□□ -1.05
CFHR3-206ENST00000617219 BCAMP50895 628 aa8.48□□□□□ -1.05
CFHR3-206ENST00000617219 KDM4CQ9H3R0 1056 aa8.48□□□□□ -1.05
CFHR3-206ENST00000617219 TMUB1Q9BVT8 246 aa8.47□□□□□ -1.05
CFHR3-206ENST00000617219 GPBP1L1Q9HC44 474 aaPredicted RBP8.47□□□□□ -1.05
CFHR3-206ENST00000617219 SOWAHBA6NEL2 793 aa8.46□□□□□ -1.05
CFHR3-206ENST00000617219 DDX11L8A8MPP1 907 aa8.46□□□□□ -1.05
CFHR3-206ENST00000617219 SSTR3P32745 418 aaPredicted RBP8.46□□□□□ -1.05
CFHR3-206ENST00000617219 KCNMA1Q12791 1236 aa8.46□□□□□ -1.05
CFHR3-206ENST00000617219 FAM217BQ9NTX9 383 aaPredicted RBP8.46□□□□□ -1.05
CFHR3-206ENST00000617219 WBP1LQ9NX94 342 aa8.46□□□□□ -1.05
CFHR3-206ENST00000617219 ST8SIA5O15466 376 aa8.45□□□□□ -1.06
CFHR3-206ENST00000617219 RDH13Q8NBN7 331 aa8.45□□□□□ -1.06
CFHR3-206ENST00000617219 KRTAP4-12Q9BQ66 201 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms