RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
MUC1-223ENST00000611571 C1orf115Q9H7X2 142 aa17.25■□□□□ 0.35
MUC1-223ENST00000611571 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
MUC1-223ENST00000611571 ANKRD30BQ9BXX2 1392 aa17.24■□□□□ 0.35
MUC1-223ENST00000611571 PTPRKQ15262 1439 aa17.24■□□□□ 0.35
MUC1-223ENST00000611571 EVC2Q86UK5 1308 aa17.23■□□□□ 0.35
MUC1-223ENST00000611571 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
MUC1-223ENST00000611571 DDX19BQ9UMR2 479 aa17.23■□□□□ 0.35
MUC1-223ENST00000611571 DIAPH1O60610 1272 aaKnown RBP17.22■□□□□ 0.35
MUC1-223ENST00000611571 MAPKBP1O60336 1514 aa17.22■□□□□ 0.35
MUC1-223ENST00000611571 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
MUC1-223ENST00000611571 MIA2Q96PC5 1412 aa17.21■□□□□ 0.35
MUC1-223ENST00000611571 PCF11O94913 1555 aaKnown RBP17.21■□□□□ 0.35
MUC1-223ENST00000611571 ZNF330Q9Y3S2 320 aaPredicted RBP17.21■□□□□ 0.34
MUC1-223ENST00000611571 VGFO15240 615 aaPredicted RBP17.2■□□□□ 0.34
MUC1-223ENST00000611571 AMER1Q5JTC6 1135 aaPredicted RBP17.2■□□□□ 0.34
MUC1-223ENST00000611571 CCDC9Q9Y3X0 531 aaKnown RBP17.2■□□□□ 0.34
MUC1-223ENST00000611571 DAPK1P53355 1430 aa17.19■□□□□ 0.34
MUC1-223ENST00000611571 NGDNQ8NEJ9 315 aaKnown RBP17.19■□□□□ 0.34
MUC1-223ENST00000611571 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
MUC1-223ENST00000611571 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
MUC1-223ENST00000611571 AMPHP49418 695 aa17.18■□□□□ 0.34
MUC1-223ENST00000611571 HSP90AA2PQ14568 343 aaPredicted RBP17.18■□□□□ 0.34
MUC1-223ENST00000611571 ST18O60284 1047 aa17.18■□□□□ 0.34
MUC1-223ENST00000611571 HMMRO75330 724 aa17.18■□□□□ 0.34
MUC1-223ENST00000611571 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
MUC1-223ENST00000611571 CHMP3Q9Y3E7 222 aa17.16■□□□□ 0.34
MUC1-223ENST00000611571 C9orf84Q5VXU9 1444 aa17.16■□□□□ 0.34
MUC1-223ENST00000611571 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
MUC1-223ENST00000611571 TRAK2O60296 914 aa17.14■□□□□ 0.34
MUC1-223ENST00000611571 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.14■□□□□ 0.33
MUC1-223ENST00000611571 NCOA1Q15788 1441 aa17.14■□□□□ 0.33
MUC1-223ENST00000611571 EIF2S2P20042 333 aaKnown RBP17.14■□□□□ 0.33
MUC1-223ENST00000611571 COG3Q96JB2 828 aa17.14■□□□□ 0.33
MUC1-223ENST00000611571 RSPH6AQ9H0K4 717 aa17.14■□□□□ 0.33
MUC1-223ENST00000611571 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.13■□□□□ 0.33
MUC1-223ENST00000611571 ZNF428Q96B54 188 aa17.13■□□□□ 0.33
MUC1-223ENST00000611571 MCTP1Q6DN14 999 aa17.12■□□□□ 0.33
MUC1-223ENST00000611571 CHAF1AQ13111 956 aaPredicted RBP17.12■□□□□ 0.33
MUC1-223ENST00000611571 HDGFP51858 240 aaKnown RBP17.12■□□□□ 0.33
MUC1-223ENST00000611571 NOB1Q9ULX3 412 aaKnown RBP17.12■□□□□ 0.33
MUC1-223ENST00000611571 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
MUC1-223ENST00000611571 SLFN5Q08AF3 891 aa17.11■□□□□ 0.33
MUC1-223ENST00000611571 RNF214Q8ND24 703 aa17.11■□□□□ 0.33
MUC1-223ENST00000611571 PRKAR2BP31323 418 aa17.11■□□□□ 0.33
MUC1-223ENST00000611571 MPNDQ8N594 471 aa17.11■□□□□ 0.33
MUC1-223ENST00000611571 ANO2Q9NQ90 1003 aa17.11■□□□□ 0.33
MUC1-223ENST00000611571 PDE3AQ14432 1141 aa17.11■□□□□ 0.33
MUC1-223ENST00000611571 ABCC5O15440 1437 aa17.1■□□□□ 0.33
MUC1-223ENST00000611571 LMOD3Q0VAK6 560 aa17.1■□□□□ 0.33
MUC1-223ENST00000611571 WWC1Q8IX03 1113 aa17.1■□□□□ 0.33
MUC1-223ENST00000611571 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
MUC1-223ENST00000611571 CFAP44Q96MT7 982 aa17.1■□□□□ 0.33
MUC1-223ENST00000611571 THUMPD2Q9BTF0 503 aaKnown RBP17.09■□□□□ 0.33
MUC1-223ENST00000611571 EFCAB5A4FU69 1503 aa17.09■□□□□ 0.33
MUC1-223ENST00000611571 TROQ12816 1431 aaPredicted RBP17.09■□□□□ 0.33
MUC1-223ENST00000611571 TULP1O00294 542 aaPredicted RBP17.09■□□□□ 0.33
MUC1-223ENST00000611571 NUTM2GQ5VZR2 741 aa17.09■□□□□ 0.33
MUC1-223ENST00000611571 BCL11BQ9C0K0 894 aaPredicted RBP17.08■□□□□ 0.33
MUC1-223ENST00000611571 NGEFQ8N5V2 710 aa17.08■□□□□ 0.32
MUC1-223ENST00000611571 FAM13BQ9NYF5 915 aa17.08■□□□□ 0.32
MUC1-223ENST00000611571 BICRAQ9NZM4 1560 aa17.08■□□□□ 0.32
MUC1-223ENST00000611571 ERBINQ96RT1 1412 aa17.08■□□□□ 0.32
MUC1-223ENST00000611571 FKBP5Q13451 457 aaPredicted RBP17.07■□□□□ 0.32
MUC1-223ENST00000611571 CYB5RLQ6IPT4 315 aa17.07■□□□□ 0.32
MUC1-223ENST00000611571 SYAP1Q96A49 352 aaPredicted RBP17.07■□□□□ 0.32
MUC1-223ENST00000611571 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
MUC1-223ENST00000611571 PTMSP20962 102 aa17.06■□□□□ 0.32
MUC1-223ENST00000611571 DUSP27Q5VZP5 1158 aa17.06■□□□□ 0.32
MUC1-223ENST00000611571 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
MUC1-223ENST00000611571 CSB-PGBD3P0DP91 1061 aa17.04■□□□□ 0.32
MUC1-223ENST00000611571 IGHDP01880 384 aa17.04■□□□□ 0.32
MUC1-223ENST00000611571 PRAM1Q96QH2 718 aa17.04■□□□□ 0.32
MUC1-223ENST00000611571 API5Q9BZZ5 524 aaKnown RBP17.04■□□□□ 0.32
MUC1-223ENST00000611571 CAVIN1Q6NZI2 390 aaKnown RBP17.03■□□□□ 0.32
MUC1-223ENST00000611571 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
MUC1-223ENST00000611571 HSP90B1P14625 803 aaKnown RBP17.03■□□□□ 0.32
MUC1-223ENST00000611571 SKOR2Q2VWA4 1001 aaPredicted RBP17.03■□□□□ 0.32
MUC1-223ENST00000611571 ARHGAP5Q13017 1502 aa17.03■□□□□ 0.32
MUC1-223ENST00000611571 PLB1Q6P1J6 1458 aa17.03■□□□□ 0.32
MUC1-223ENST00000611571 FAM43AQ8N2R8 423 aa17.03■□□□□ 0.32
MUC1-223ENST00000611571 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.03■□□□□ 0.32
MUC1-223ENST00000611571 CABP1Q9NZU7 370 aa17.02■□□□□ 0.32
MUC1-223ENST00000611571 REC8O95072 547 aa17.02■□□□□ 0.31
MUC1-223ENST00000611571 GNAI1P63096 354 aa17.02■□□□□ 0.31
MUC1-223ENST00000611571 ATF7IPQ6VMQ6 1270 aa17.01■□□□□ 0.31
MUC1-223ENST00000611571 RPRD2Q5VT52 1461 aaKnown RBP17.01■□□□□ 0.31
MUC1-223ENST00000611571 SUPT6HQ7KZ85 1726 aaKnown RBP17.01■□□□□ 0.31
MUC1-223ENST00000611571 MVPQ14764 893 aaKnown RBP17.01■□□□□ 0.31
MUC1-223ENST00000611571 ARHGEF11O15085 1522 aa17■□□□□ 0.31
MUC1-223ENST00000611571 PTPN23Q9H3S7 1636 aa17■□□□□ 0.31
MUC1-223ENST00000611571 SCAPERQ9BY12 1400 aa17■□□□□ 0.31
MUC1-223ENST00000611571 MRE11P49959 708 aa16.99■□□□□ 0.31
MUC1-223ENST00000611571 NEK4P51957 841 aa16.99■□□□□ 0.31
MUC1-223ENST00000611571 TMEM57Q8N5G2 664 aa16.99■□□□□ 0.31
MUC1-223ENST00000611571 TSPYL4Q9UJ04 414 aa16.99■□□□□ 0.31
MUC1-223ENST00000611571 PRPF40AO75400 957 aaKnown RBP16.99■□□□□ 0.31
MUC1-223ENST00000611571 NASPP49321 788 aaPredicted RBP16.99■□□□□ 0.31
MUC1-223ENST00000611571 MCM4P33991 863 aa16.99■□□□□ 0.31
MUC1-223ENST00000611571 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms