RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 SLC4A3P48751 1232 aa13.5□□□□□ -0.25
LINC00458-206ENST00000607494 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
LINC00458-206ENST00000607494 HIC1Q14526 733 aa13.49□□□□□ -0.25
LINC00458-206ENST00000607494 BLOC1S3Q6QNY0 202 aa13.49□□□□□ -0.25
LINC00458-206ENST00000607494 PXYLP1Q8TE99 480 aa13.49□□□□□ -0.25
LINC00458-206ENST00000607494 PCDHB3Q9Y5E6 796 aa13.48□□□□□ -0.25
LINC00458-206ENST00000607494 CFHP08603 1231 aa13.47□□□□□ -0.25
LINC00458-206ENST00000607494 SLC10A3P09131 477 aa13.47□□□□□ -0.25
LINC00458-206ENST00000607494 TLL1O43897 1013 aa13.46□□□□□ -0.25
LINC00458-206ENST00000607494 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
LINC00458-206ENST00000607494 METTL3Q86U44 580 aaKnown RBP13.46□□□□□ -0.25
LINC00458-206ENST00000607494 NLRP7Q8WX94 980 aa13.46□□□□□ -0.25
LINC00458-206ENST00000607494 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.45□□□□□ -0.26
LINC00458-206ENST00000607494 GNPATO15228 680 aa13.45□□□□□ -0.26
LINC00458-206ENST00000607494 ZPR1O75312 459 aa13.45□□□□□ -0.26
LINC00458-206ENST00000607494 PRKD2Q9BZL6 878 aa13.44□□□□□ -0.26
LINC00458-206ENST00000607494 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.44□□□□□ -0.26
LINC00458-206ENST00000607494 OATP04181 439 aa13.42□□□□□ -0.26
LINC00458-206ENST00000607494 PRR14Q9BWN1 585 aa13.42□□□□□ -0.26
LINC00458-206ENST00000607494 ACTN4O43707 911 aaKnown RBP13.39□□□□□ -0.27
LINC00458-206ENST00000607494 KMT5BQ4FZB7 885 aa13.39□□□□□ -0.27
LINC00458-206ENST00000607494 GPIHBP1Q8IV16 184 aa13.39□□□□□ -0.27
LINC00458-206ENST00000607494 PHOX2BQ99453 314 aa13.38□□□□□ -0.27
LINC00458-206ENST00000607494 Q6ZNB5 142 aa13.35□□□□□ -0.27
LINC00458-206ENST00000607494 SLC24A1O60721 1099 aa13.34□□□□□ -0.27
LINC00458-206ENST00000607494 PUS10Q3MIT2 529 aaKnown RBP13.34□□□□□ -0.27
LINC00458-206ENST00000607494 VSIG10Q8N0Z9 540 aa13.32□□□□□ -0.28
LINC00458-206ENST00000607494 RNF223E7ERA6 249 aa13.31□□□□□ -0.28
LINC00458-206ENST00000607494 PPEF1O14829 653 aaPredicted RBP13.31□□□□□ -0.28
LINC00458-206ENST00000607494 S1PR4O95977 384 aa13.31□□□□□ -0.28
LINC00458-206ENST00000607494 GGCXP38435 758 aa13.31□□□□□ -0.28
LINC00458-206ENST00000607494 V9GY48 417 aaPredicted RBP13.31□□□□□ -0.28
LINC00458-206ENST00000607494 DDX11L8A8MPP1 907 aa13.3□□□□□ -0.28
LINC00458-206ENST00000607494 GFRA3O60609 400 aa13.3□□□□□ -0.28
LINC00458-206ENST00000607494 RDH13Q8NBN7 331 aa13.3□□□□□ -0.28
LINC00458-206ENST00000607494 LCE2BO14633 110 aa13.29□□□□□ -0.28
LINC00458-206ENST00000607494 EMID1Q96A84 441 aaPredicted RBP13.29□□□□□ -0.28
LINC00458-206ENST00000607494 DAXXQ9UER7 740 aaPredicted RBP13.29□□□□□ -0.28
LINC00458-206ENST00000607494 TMUB1Q9BVT8 246 aa13.26□□□□□ -0.29
LINC00458-206ENST00000607494 NR1I2O75469 434 aa13.25□□□□□ -0.29
LINC00458-206ENST00000607494 SCUBE3Q8IX30 993 aa13.25□□□□□ -0.29
LINC00458-206ENST00000607494 ADH1BP00325 375 aa13.24□□□□□ -0.29
LINC00458-206ENST00000607494 FUT2Q10981 343 aa13.23□□□□□ -0.29
LINC00458-206ENST00000607494 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
LINC00458-206ENST00000607494 LAPTM4AQ15012 233 aa13.2□□□□□ -0.3
LINC00458-206ENST00000607494 NRG2O14511 850 aaPredicted RBP13.19□□□□□ -0.3
LINC00458-206ENST00000607494 SLC19A1P41440 591 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 MAP2K5Q13163 448 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 MORN1Q5T089 497 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 ANKLE1Q8NAG6 615 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 SLC6A16Q9GZN6 736 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
LINC00458-206ENST00000607494 GCGRP47871 477 aa13.17□□□□□ -0.3
LINC00458-206ENST00000607494 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
LINC00458-206ENST00000607494 TRIM67Q6ZTA4 783 aa13.17□□□□□ -0.3
LINC00458-206ENST00000607494 SPSB2Q99619 263 aa13.17□□□□□ -0.3
LINC00458-206ENST00000607494 TULP1O00294 542 aaPredicted RBP13.15□□□□□ -0.3
LINC00458-206ENST00000607494 SULF1Q8IWU6 871 aa13.15□□□□□ -0.3
LINC00458-206ENST00000607494 SLC27A5Q9Y2P5 690 aa13.15□□□□□ -0.3
LINC00458-206ENST00000607494 SPRYD7Q5W111 196 aa13.14□□□□□ -0.31
LINC00458-206ENST00000607494 IRF6O14896 467 aa13.13□□□□□ -0.31
LINC00458-206ENST00000607494 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
LINC00458-206ENST00000607494 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
LINC00458-206ENST00000607494 TRAF7Q6Q0C0 670 aa13.13□□□□□ -0.31
LINC00458-206ENST00000607494 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
LINC00458-206ENST00000607494 THAP11Q96EK4 314 aa13.13□□□□□ -0.31
LINC00458-206ENST00000607494 PRDM9Q9NQV7 894 aa13.13□□□□□ -0.31
LINC00458-206ENST00000607494 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
LINC00458-206ENST00000607494 CD46P15529 392 aa13.09□□□□□ -0.31
LINC00458-206ENST00000607494 ZNF697Q5TEC3 545 aa13.09□□□□□ -0.31
LINC00458-206ENST00000607494 FAM160A2Q8N612 972 aaPredicted RBP13.09□□□□□ -0.31
LINC00458-206ENST00000607494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.08□□□□□ -0.32
LINC00458-206ENST00000607494 ZNF598Q86UK7 904 aaKnown RBP13.08□□□□□ -0.32
LINC00458-206ENST00000607494 HLA-CQ95604 372 aa13.07□□□□□ -0.32
LINC00458-206ENST00000607494 FCF1Q9Y324 198 aaKnown RBP13.07□□□□□ -0.32
LINC00458-206ENST00000607494 MINK1Q8N4C8 1332 aaPredicted RBP13.07□□□□□ -0.32
LINC00458-206ENST00000607494 TNFRSF10AO00220 468 aa13.06□□□□□ -0.32
LINC00458-206ENST00000607494 FMNL1O95466 1100 aaPredicted RBP13.06□□□□□ -0.32
LINC00458-206ENST00000607494 BRICD5Q6PL45 260 aa13.04□□□□□ -0.32
LINC00458-206ENST00000607494 LMOD2Q6P5Q4 547 aa13.03□□□□□ -0.32
LINC00458-206ENST00000607494 GDF9O60383 454 aa13.01□□□□□ -0.33
LINC00458-206ENST00000607494 KDM4AO75164 1064 aa13□□□□□ -0.33
LINC00458-206ENST00000607494 GUCA2AQ02747 115 aa12.99□□□□□ -0.33
LINC00458-206ENST00000607494 REPIN1Q9BWE0 567 aaKnown RBP12.99□□□□□ -0.33
LINC00458-206ENST00000607494 PRR20EP86478 221 aa12.98□□□□□ -0.33
LINC00458-206ENST00000607494 PRR20CP86479 221 aa12.98□□□□□ -0.33
LINC00458-206ENST00000607494 PRR20DP86480 221 aa12.98□□□□□ -0.33
LINC00458-206ENST00000607494 PRR20BP86481 221 aa12.98□□□□□ -0.33
LINC00458-206ENST00000607494 PRR20AP86496 221 aa12.98□□□□□ -0.33
LINC00458-206ENST00000607494 GPCPD1Q9NPB8 672 aa12.98□□□□□ -0.33
LINC00458-206ENST00000607494 SALL2Q9Y467 1007 aaPredicted RBP12.98□□□□□ -0.33
LINC00458-206ENST00000607494 FOXC1Q12948 553 aa12.97□□□□□ -0.33
LINC00458-206ENST00000607494 GRIPAP1Q4V328 841 aa12.97□□□□□ -0.33
LINC00458-206ENST00000607494 FAM217BQ9NTX9 383 aaPredicted RBP12.97□□□□□ -0.33
LINC00458-206ENST00000607494 PKD2L1Q9P0L9 805 aa12.97□□□□□ -0.33
LINC00458-206ENST00000607494 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
LINC00458-206ENST00000607494 FAM187AA6NFU0 413 aa12.95□□□□□ -0.34
LINC00458-206ENST00000607494 HOXA2O43364 376 aa12.95□□□□□ -0.34
LINC00458-206ENST00000607494 PKDCCQ504Y2 493 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms