RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 CD46P15529 392 aa3.67□□□□□ -1.82
SNORA28-201ENST00000606769 DNAJB2P25686 324 aa3.67□□□□□ -1.82
SNORA28-201ENST00000606769 CLCN1P35523 988 aa3.67□□□□□ -1.82
SNORA28-201ENST00000606769 TTLL12Q14166 644 aaPredicted RBP3.67□□□□□ -1.82
SNORA28-201ENST00000606769 SWT1Q5T5J6 900 aaKnown RBP3.67□□□□□ -1.82
SNORA28-201ENST00000606769 FAM98CQ17RN3 349 aaKnown RBP3.66□□□□□ -1.82
SNORA28-201ENST00000606769 BEGAINQ9BUH8 593 aa3.66□□□□□ -1.82
SNORA28-201ENST00000606769 ANKRD13DQ6ZTN6 518 aa3.65□□□□□ -1.83
SNORA28-201ENST00000606769 SAMD7Q7Z3H4 446 aa3.65□□□□□ -1.83
SNORA28-201ENST00000606769 LAPTM4BQ86VI4 370 aa3.65□□□□□ -1.83
SNORA28-201ENST00000606769 CDAN1Q8IWY9 1227 aa3.65□□□□□ -1.83
SNORA28-201ENST00000606769 ZFRQ96KR1 1074 aaKnown RBP3.65□□□□□ -1.83
SNORA28-201ENST00000606769 DDX11L8A8MPP1 907 aa3.64□□□□□ -1.83
SNORA28-201ENST00000606769 MYSM1Q5VVJ2 828 aa3.64□□□□□ -1.83
SNORA28-201ENST00000606769 SPIRE2Q8WWL2 714 aa3.64□□□□□ -1.83
SNORA28-201ENST00000606769 HLA-CQ95604 372 aa3.64□□□□□ -1.83
SNORA28-201ENST00000606769 GCGRP47871 477 aa3.63□□□□□ -1.83
SNORA28-201ENST00000606769 SH3D19Q5HYK7 790 aa3.63□□□□□ -1.83
SNORA28-201ENST00000606769 PROCA1Q8NCQ7 364 aaPredicted RBP3.63□□□□□ -1.83
SNORA28-201ENST00000606769 DDRGK1Q96HY6 314 aa3.63□□□□□ -1.83
SNORA28-201ENST00000606769 KCNH8Q96L42 1107 aa3.63□□□□□ -1.83
SNORA28-201ENST00000606769 TBC1D2Q9BYX2 928 aa3.63□□□□□ -1.83
SNORA28-201ENST00000606769 LIMD1Q9UGP4 676 aa3.63□□□□□ -1.83
SNORA28-201ENST00000606769 SOWAHBA6NEL2 793 aa3.62□□□□□ -1.83
SNORA28-201ENST00000606769 BCAMP50895 628 aa3.62□□□□□ -1.83
SNORA28-201ENST00000606769 MRPL50Q8N5N7 158 aaKnown RBP3.62□□□□□ -1.83
SNORA28-201ENST00000606769 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.62□□□□□ -1.83
SNORA28-201ENST00000606769 NBPF3Q9H094 633 aa3.62□□□□□ -1.83
SNORA28-201ENST00000606769 GOPCQ9HD26 462 aa3.62□□□□□ -1.83
SNORA28-201ENST00000606769 PCDHGC3Q9UN70 934 aa3.62□□□□□ -1.83
SNORA28-201ENST00000606769 MOXD2PA6NHM9 499 aa3.61□□□□□ -1.83
SNORA28-201ENST00000606769 NDUFV2P19404 249 aa3.61□□□□□ -1.83
SNORA28-201ENST00000606769 GUCA2AQ02747 115 aa3.61□□□□□ -1.83
SNORA28-201ENST00000606769 POLR3EQ9NVU0 708 aa3.61□□□□□ -1.83
SNORA28-201ENST00000606769 PCDHB15Q9Y5E8 787 aa3.61□□□□□ -1.83
SNORA28-201ENST00000606769 GTF3C3Q9Y5Q9 886 aa3.61□□□□□ -1.83
SNORA28-201ENST00000606769 SPTLC1O15269 473 aa3.6□□□□□ -1.83
SNORA28-201ENST00000606769 HOXA2O43364 376 aa3.6□□□□□ -1.83
SNORA28-201ENST00000606769 APLP1P51693 650 aa3.6□□□□□ -1.83
SNORA28-201ENST00000606769 FUT2Q10981 343 aa3.6□□□□□ -1.83
SNORA28-201ENST00000606769 SKIV2LQ15477 1246 aaKnown RBP3.6□□□□□ -1.83
SNORA28-201ENST00000606769 RSBN1LQ6PCB5 846 aaPredicted RBP3.6□□□□□ -1.83
SNORA28-201ENST00000606769 THSD4Q6ZMP0 1018 aa3.6□□□□□ -1.83
SNORA28-201ENST00000606769 KDM4AO75164 1064 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 CFHP08603 1231 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 QPCTQ16769 361 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 TUSC1Q2TAM9 212 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 SPNS2Q8IVW8 549 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 SULF1Q8IWU6 871 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 RDH13Q8NBN7 331 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 WNT2BQ93097 391 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 WBP1LQ9NX94 342 aa3.59□□□□□ -1.83
SNORA28-201ENST00000606769 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.59□□□□□ -1.83
SNORA28-201ENST00000606769 ACTN4O43707 911 aaKnown RBP3.58□□□□□ -1.84
SNORA28-201ENST00000606769 LILRB3O75022 631 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 CLK2P49760 499 aaKnown RBP3.58□□□□□ -1.84
SNORA28-201ENST00000606769 RTL5Q5HYW3 569 aaPredicted RBP3.58□□□□□ -1.84
SNORA28-201ENST00000606769 MORN1Q5T089 497 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 PPP2R2DQ66LE6 453 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 RIC3Q7Z5B4 369 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 SLF2Q8IX21 1173 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 ANKK1Q8NFD2 765 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 CABLES1Q8TDN4 633 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 LRCH3Q96II8 777 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 TIMELESSQ9UNS1 1208 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 HPS5Q9UPZ3 1129 aa3.58□□□□□ -1.84
SNORA28-201ENST00000606769 GJA5P36382 358 aa3.57□□□□□ -1.84
SNORA28-201ENST00000606769 PUS10Q3MIT2 529 aaKnown RBP3.57□□□□□ -1.84
SNORA28-201ENST00000606769 SYMPKQ92797 1274 aaKnown RBP3.57□□□□□ -1.84
SNORA28-201ENST00000606769 KCTD12Q96CX2 325 aaKnown RBP3.57□□□□□ -1.84
SNORA28-201ENST00000606769 THAP11Q96EK4 314 aa3.57□□□□□ -1.84
SNORA28-201ENST00000606769 RSPH6AQ9H0K4 717 aa3.57□□□□□ -1.84
SNORA28-201ENST00000606769 TSR3Q9UJK0 312 aaKnown RBP3.57□□□□□ -1.84
SNORA28-201ENST00000606769 SLC27A5Q9Y2P5 690 aa3.57□□□□□ -1.84
SNORA28-201ENST00000606769 RNF40O75150 1001 aa3.56□□□□□ -1.84
SNORA28-201ENST00000606769 FDX1P10109 184 aa3.56□□□□□ -1.84
SNORA28-201ENST00000606769 HRCP23327 699 aa3.56□□□□□ -1.84
SNORA28-201ENST00000606769 ATP6V1AP38606 617 aa3.56□□□□□ -1.84
SNORA28-201ENST00000606769 BLOC1S3Q6QNY0 202 aa3.56□□□□□ -1.84
SNORA28-201ENST00000606769 RNF19BQ6ZMZ0 732 aa3.56□□□□□ -1.84
SNORA28-201ENST00000606769 CFAP99D6REC4 459 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 RFC5P40937 340 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 PPP4CP60510 307 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 USP46P62068 366 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 CSPP1Q1MSJ5 1256 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 NUTM1Q86Y26 1132 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 PCMTD1Q96MG8 357 aaPredicted RBP3.55□□□□□ -1.84
SNORA28-201ENST00000606769 MYT1LQ9UL68 1186 aa3.55□□□□□ -1.84
SNORA28-201ENST00000606769 GOLGA8CPA6NN73 597 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 GPR37L1O60883 481 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 HDGFP51858 240 aaKnown RBP3.54□□□□□ -1.84
SNORA28-201ENST00000606769 DIXDC1Q155Q3 683 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 TJAP1Q5JTD0 557 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 PRPF38BQ5VTL8 546 aaKnown RBP3.54□□□□□ -1.84
SNORA28-201ENST00000606769 BRICD5Q6PL45 260 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 ZNF516Q92618 1163 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 SNRKQ9NRH2 765 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 PCDH10Q9P2E7 1040 aa3.54□□□□□ -1.84
SNORA28-201ENST00000606769 TLL1O43897 1013 aa3.53□□□□□ -1.84
SNORA28-201ENST00000606769 PTPN5P54829 565 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms