RNA–Protein interactions for RNA: ENST00000606102.1

HMGN2P28-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 28, humanhuman

BASIC

Gene HMGN2P28, Length 262 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P28-201ENST00000606102 TJAP1Q5JTD0 557 aa6.89□□□□□ -1.31
HMGN2P28-201ENST00000606102 KCNC4Q03721 635 aa6.88□□□□□ -1.31
HMGN2P28-201ENST00000606102 TMEM134Q9H6X4 195 aa6.88□□□□□ -1.31
HMGN2P28-201ENST00000606102 DNAJB2P25686 324 aa6.87□□□□□ -1.31
HMGN2P28-201ENST00000606102 HIC1Q14526 733 aa6.87□□□□□ -1.31
HMGN2P28-201ENST00000606102 RBM46Q8TBY0 533 aaKnown RBP6.87□□□□□ -1.31
HMGN2P28-201ENST00000606102 PXYLP1Q8TE99 480 aa6.87□□□□□ -1.31
HMGN2P28-201ENST00000606102 ZNF516Q92618 1163 aa6.87□□□□□ -1.31
HMGN2P28-201ENST00000606102 MTRQ99707 1265 aa6.87□□□□□ -1.31
HMGN2P28-201ENST00000606102 GNPATO15228 680 aa6.86□□□□□ -1.31
HMGN2P28-201ENST00000606102 SMYD5Q6GMV2 418 aa6.86□□□□□ -1.31
HMGN2P28-201ENST00000606102 SLF2Q8IX21 1173 aa6.86□□□□□ -1.31
HMGN2P28-201ENST00000606102 HDGFP51858 240 aaKnown RBP6.85□□□□□ -1.31
HMGN2P28-201ENST00000606102 SLC10A3P09131 477 aa6.84□□□□□ -1.31
HMGN2P28-201ENST00000606102 METTL3Q86U44 580 aaKnown RBP6.84□□□□□ -1.31
HMGN2P28-201ENST00000606102 NLRP7Q8WX94 980 aa6.84□□□□□ -1.31
HMGN2P28-201ENST00000606102 PHOX2BQ99453 314 aa6.84□□□□□ -1.31
HMGN2P28-201ENST00000606102 GPIHBP1Q8IV16 184 aa6.83□□□□□ -1.32
HMGN2P28-201ENST00000606102 IL21Q9HBE4 155 aa6.83□□□□□ -1.32
HMGN2P28-201ENST00000606102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.82□□□□□ -1.32
HMGN2P28-201ENST00000606102 COPS2P61201 443 aa6.82□□□□□ -1.32
HMGN2P28-201ENST00000606102 NKX2-3Q8TAU0 364 aa6.82□□□□□ -1.32
HMGN2P28-201ENST00000606102 PODXL2Q9NZ53 605 aa6.82□□□□□ -1.32
HMGN2P28-201ENST00000606102 RGS20O76081 388 aa6.81□□□□□ -1.32
HMGN2P28-201ENST00000606102 OATP04181 439 aa6.81□□□□□ -1.32
HMGN2P28-201ENST00000606102 CFHP08603 1231 aa6.8□□□□□ -1.32
HMGN2P28-201ENST00000606102 BLOC1S3Q6QNY0 202 aa6.8□□□□□ -1.32
HMGN2P28-201ENST00000606102 TLL1O43897 1013 aa6.78□□□□□ -1.32
HMGN2P28-201ENST00000606102 PPP1R18Q6NYC8 613 aa6.78□□□□□ -1.32
HMGN2P28-201ENST00000606102 NECTIN2Q92692 538 aa6.78□□□□□ -1.32
HMGN2P28-201ENST00000606102 PCDHB3Q9Y5E6 796 aa6.78□□□□□ -1.32
HMGN2P28-201ENST00000606102 ACTN4O43707 911 aaKnown RBP6.77□□□□□ -1.33
HMGN2P28-201ENST00000606102 ZPR1O75312 459 aa6.76□□□□□ -1.33
HMGN2P28-201ENST00000606102 SLC4A3P48751 1232 aa6.76□□□□□ -1.33
HMGN2P28-201ENST00000606102 KMT5BQ4FZB7 885 aa6.75□□□□□ -1.33
HMGN2P28-201ENST00000606102 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.75□□□□□ -1.33
HMGN2P28-201ENST00000606102 MAP2K5Q13163 448 aa6.74□□□□□ -1.33
HMGN2P28-201ENST00000606102 PRR14Q9BWN1 585 aa6.74□□□□□ -1.33
HMGN2P28-201ENST00000606102 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.74□□□□□ -1.33
HMGN2P28-201ENST00000606102 DDX11L8A8MPP1 907 aa6.73□□□□□ -1.33
HMGN2P28-201ENST00000606102 PUS10Q3MIT2 529 aaKnown RBP6.73□□□□□ -1.33
HMGN2P28-201ENST00000606102 IRF6O14896 467 aa6.72□□□□□ -1.33
HMGN2P28-201ENST00000606102 CCDC102AQ96A19 550 aa6.72□□□□□ -1.33
HMGN2P28-201ENST00000606102 EMID1Q96A84 441 aaPredicted RBP6.72□□□□□ -1.33
HMGN2P28-201ENST00000606102 IRX2Q9BZI1 471 aaPredicted RBP6.72□□□□□ -1.33
HMGN2P28-201ENST00000606102 LMOD2Q6P5Q4 547 aa6.71□□□□□ -1.34
HMGN2P28-201ENST00000606102 RDH13Q8NBN7 331 aa6.71□□□□□ -1.34
HMGN2P28-201ENST00000606102 PRKD2Q9BZL6 878 aa6.71□□□□□ -1.34
HMGN2P28-201ENST00000606102 PPEF1O14829 653 aaPredicted RBP6.7□□□□□ -1.34
HMGN2P28-201ENST00000606102 GCGRP47871 477 aa6.7□□□□□ -1.34
HMGN2P28-201ENST00000606102 RNF223E7ERA6 249 aa6.69□□□□□ -1.34
HMGN2P28-201ENST00000606102 MDM2Q00987 491 aaPredicted RBP6.69□□□□□ -1.34
HMGN2P28-201ENST00000606102 FUT2Q10981 343 aa6.69□□□□□ -1.34
HMGN2P28-201ENST00000606102 SCUBE3Q8IX30 993 aa6.69□□□□□ -1.34
HMGN2P28-201ENST00000606102 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
HMGN2P28-201ENST00000606102 S1PR4O95977 384 aa6.68□□□□□ -1.34
HMGN2P28-201ENST00000606102 ADH1BP00325 375 aa6.68□□□□□ -1.34
HMGN2P28-201ENST00000606102 CD46P15529 392 aa6.68□□□□□ -1.34
HMGN2P28-201ENST00000606102 MORN1Q5T089 497 aa6.68□□□□□ -1.34
HMGN2P28-201ENST00000606102 NR1I2O75469 434 aa6.67□□□□□ -1.34
HMGN2P28-201ENST00000606102 THAP11Q96EK4 314 aa6.67□□□□□ -1.34
HMGN2P28-201ENST00000606102 SUPT5HO00267 1087 aaKnown RBP6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 LCE2BO14633 110 aa6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 PLA2G2CQ5R387 149 aa6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 RSPH4AQ5TD94 716 aa6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 SULF1Q8IWU6 871 aa6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 ZC3H15Q8WU90 426 aaKnown RBP6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 TMUB1Q9BVT8 246 aa6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 REPIN1Q9BWE0 567 aaKnown RBP6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 SLC27A5Q9Y2P5 690 aa6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 V9GY48 417 aaPredicted RBP6.66□□□□□ -1.34
HMGN2P28-201ENST00000606102 ZMYND10O75800 440 aa6.65□□□□□ -1.34
HMGN2P28-201ENST00000606102 NPM2Q86SE8 214 aaKnown RBP6.65□□□□□ -1.34
HMGN2P28-201ENST00000606102 HLA-CQ95604 372 aa6.65□□□□□ -1.34
HMGN2P28-201ENST00000606102 GGCXP38435 758 aa6.64□□□□□ -1.35
HMGN2P28-201ENST00000606102 ATP6V1AP38606 617 aa6.64□□□□□ -1.35
HMGN2P28-201ENST00000606102 BARGINQ6ZT62 677 aa6.64□□□□□ -1.35
HMGN2P28-201ENST00000606102 SPSB2Q99619 263 aa6.64□□□□□ -1.35
HMGN2P28-201ENST00000606102 SLC6A16Q9GZN6 736 aa6.64□□□□□ -1.35
HMGN2P28-201ENST00000606102 RNF19BQ6ZMZ0 732 aa6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 LIAT1Q6ZQX7 453 aa6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 TRIM67Q6ZTA4 783 aa6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 FAM160A2Q8N612 972 aaPredicted RBP6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 ANKLE1Q8NAG6 615 aa6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 PRDM9Q9NQV7 894 aa6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 FAM217BQ9NTX9 383 aaPredicted RBP6.63□□□□□ -1.35
HMGN2P28-201ENST00000606102 GFRA3O60609 400 aa6.62□□□□□ -1.35
HMGN2P28-201ENST00000606102 GPCPD1Q9NPB8 672 aa6.62□□□□□ -1.35
HMGN2P28-201ENST00000606102 SLC19A1P41440 591 aa6.61□□□□□ -1.35
HMGN2P28-201ENST00000606102 BRPF1P55201 1214 aaPredicted RBP6.61□□□□□ -1.35
HMGN2P28-201ENST00000606102 BRICD5Q6PL45 260 aa6.61□□□□□ -1.35
HMGN2P28-201ENST00000606102 KDM4AO75164 1064 aa6.6□□□□□ -1.35
HMGN2P28-201ENST00000606102 GUCA2AQ02747 115 aa6.6□□□□□ -1.35
HMGN2P28-201ENST00000606102 NEUROD2Q15784 382 aa6.6□□□□□ -1.35
HMGN2P28-201ENST00000606102 Q6ZNB5 142 aa6.6□□□□□ -1.35
HMGN2P28-201ENST00000606102 FMNL1O95466 1100 aaPredicted RBP6.59□□□□□ -1.35
HMGN2P28-201ENST00000606102 CLCN1P35523 988 aa6.59□□□□□ -1.35
HMGN2P28-201ENST00000606102 SPRYD7Q5W111 196 aa6.59□□□□□ -1.35
HMGN2P28-201ENST00000606102 HOXA2O43364 376 aa6.58□□□□□ -1.36
HMGN2P28-201ENST00000606102 KRI1Q8N9T8 703 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms