RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
HMGB1P50-201ENST00000605814 EYA1Q99502 592 aa6.91□□□□□ -1.3
HMGB1P50-201ENST00000605814 TMUB1Q9BVT8 246 aa6.91□□□□□ -1.3
HMGB1P50-201ENST00000605814 TSHZ2Q9NRE2 1034 aa6.91□□□□□ -1.3
HMGB1P50-201ENST00000605814 PTGDRQ13258 359 aa6.9□□□□□ -1.3
HMGB1P50-201ENST00000605814 BLOC1S3Q6QNY0 202 aa6.89□□□□□ -1.31
HMGB1P50-201ENST00000605814 FCHSD2O94868 740 aa6.88□□□□□ -1.31
HMGB1P50-201ENST00000605814 CFHP08603 1231 aa6.88□□□□□ -1.31
HMGB1P50-201ENST00000605814 MYT1Q01538 1121 aa6.88□□□□□ -1.31
HMGB1P50-201ENST00000605814 RSPH4AQ5TD94 716 aa6.88□□□□□ -1.31
HMGB1P50-201ENST00000605814 RCCD1A6NED2 376 aa6.87□□□□□ -1.31
HMGB1P50-201ENST00000605814 TMEM134Q9H6X4 195 aa6.87□□□□□ -1.31
HMGB1P50-201ENST00000605814 ADGRG1Q9Y653 693 aa6.87□□□□□ -1.31
HMGB1P50-201ENST00000605814 TLL1O43897 1013 aa6.86□□□□□ -1.31
HMGB1P50-201ENST00000605814 SLC19A1P41440 591 aa6.86□□□□□ -1.31
HMGB1P50-201ENST00000605814 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.85□□□□□ -1.31
HMGB1P50-201ENST00000605814 RNF223E7ERA6 249 aa6.85□□□□□ -1.31
HMGB1P50-201ENST00000605814 NR1I2O75469 434 aa6.85□□□□□ -1.31
HMGB1P50-201ENST00000605814 FAM161AQ3B820 660 aa6.85□□□□□ -1.31
HMGB1P50-201ENST00000605814 PKDCCQ504Y2 493 aa6.85□□□□□ -1.31
HMGB1P50-201ENST00000605814 ACTN4O43707 911 aaKnown RBP6.84□□□□□ -1.31
HMGB1P50-201ENST00000605814 OATP04181 439 aa6.84□□□□□ -1.31
HMGB1P50-201ENST00000605814 ZNF787Q6DD87 383 aa6.84□□□□□ -1.31
HMGB1P50-201ENST00000605814 S1PR4O95977 384 aa6.83□□□□□ -1.32
HMGB1P50-201ENST00000605814 SMYD5Q6GMV2 418 aa6.83□□□□□ -1.32
HMGB1P50-201ENST00000605814 SEMA3EO15041 775 aa6.82□□□□□ -1.32
HMGB1P50-201ENST00000605814 ADH1BP00325 375 aa6.82□□□□□ -1.32
HMGB1P50-201ENST00000605814 HRCP23327 699 aa6.82□□□□□ -1.32
HMGB1P50-201ENST00000605814 ANKLE1Q8NAG6 615 aa6.82□□□□□ -1.32
HMGB1P50-201ENST00000605814 RDH13Q8NBN7 331 aa6.81□□□□□ -1.32
HMGB1P50-201ENST00000605814 SLC6A16Q9GZN6 736 aa6.81□□□□□ -1.32
HMGB1P50-201ENST00000605814 LCE2BO14633 110 aa6.8□□□□□ -1.32
HMGB1P50-201ENST00000605814 PPEF1O14829 653 aaPredicted RBP6.8□□□□□ -1.32
HMGB1P50-201ENST00000605814 HIC1Q14526 733 aa6.8□□□□□ -1.32
HMGB1P50-201ENST00000605814 ZNF697Q5TEC3 545 aa6.8□□□□□ -1.32
HMGB1P50-201ENST00000605814 FAM187AA6NFU0 413 aa6.79□□□□□ -1.32
HMGB1P50-201ENST00000605814 SPRYD7Q5W111 196 aa6.79□□□□□ -1.32
HMGB1P50-201ENST00000605814 ZNF598Q86UK7 904 aaKnown RBP6.79□□□□□ -1.32
HMGB1P50-201ENST00000605814 PXYLP1Q8TE99 480 aa6.78□□□□□ -1.32
HMGB1P50-201ENST00000605814 TNFRSF10AO00220 468 aa6.77□□□□□ -1.33
HMGB1P50-201ENST00000605814 SLC10A3P09131 477 aa6.77□□□□□ -1.33
HMGB1P50-201ENST00000605814 PUS10Q3MIT2 529 aaKnown RBP6.77□□□□□ -1.33
HMGB1P50-201ENST00000605814 SPSB2Q99619 263 aa6.77□□□□□ -1.33
HMGB1P50-201ENST00000605814 DDX11L8A8MPP1 907 aa6.76□□□□□ -1.33
HMGB1P50-201ENST00000605814 DGAT1O75907 488 aa6.76□□□□□ -1.33
HMGB1P50-201ENST00000605814 METTL3Q86U44 580 aaKnown RBP6.76□□□□□ -1.33
HMGB1P50-201ENST00000605814 SCUBE3Q8IX30 993 aa6.76□□□□□ -1.33
HMGB1P50-201ENST00000605814 GNPATO15228 680 aa6.75□□□□□ -1.33
HMGB1P50-201ENST00000605814 FOXC1Q12948 553 aa6.75□□□□□ -1.33
HMGB1P50-201ENST00000605814 RBM26Q5T8P6 1007 aaKnown RBP6.75□□□□□ -1.33
HMGB1P50-201ENST00000605814 SULF1Q8IWU6 871 aa6.75□□□□□ -1.33
HMGB1P50-201ENST00000605814 PRR20EP86478 221 aa6.74□□□□□ -1.33
HMGB1P50-201ENST00000605814 PRR20CP86479 221 aa6.74□□□□□ -1.33
HMGB1P50-201ENST00000605814 PRR20DP86480 221 aa6.74□□□□□ -1.33
HMGB1P50-201ENST00000605814 PRR20BP86481 221 aa6.74□□□□□ -1.33
HMGB1P50-201ENST00000605814 PRR20AP86496 221 aa6.74□□□□□ -1.33
HMGB1P50-201ENST00000605814 LIAT1Q6ZQX7 453 aa6.74□□□□□ -1.33
HMGB1P50-201ENST00000605814 TRIM67Q6ZTA4 783 aa6.73□□□□□ -1.33
HMGB1P50-201ENST00000605814 DAXXQ9UER7 740 aaPredicted RBP6.73□□□□□ -1.33
HMGB1P50-201ENST00000605814 ZBTB24O43167 697 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P50-201ENST00000605814 FMNL1O95466 1100 aaPredicted RBP6.72□□□□□ -1.33
HMGB1P50-201ENST00000605814 GRIPAP1Q4V328 841 aa6.72□□□□□ -1.33
HMGB1P50-201ENST00000605814 TESPA1A2RU30 521 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 TULP1O00294 542 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 ATP6V1AP38606 617 aa6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 FUT2Q10981 343 aa6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 GPIHBP1Q8IV16 184 aa6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 FCF1Q9Y324 198 aaKnown RBP6.71□□□□□ -1.34
HMGB1P50-201ENST00000605814 CD2BP2O95400 341 aaKnown RBP6.7□□□□□ -1.34
HMGB1P50-201ENST00000605814 ZNF775Q96BV0 537 aaPredicted RBP6.7□□□□□ -1.34
HMGB1P50-201ENST00000605814 GDF9O60383 454 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 PLCB2Q00722 1185 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 PLA2G2CQ5R387 149 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 MORN1Q5T089 497 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 LMOD2Q6P5Q4 547 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 CYP4X1Q8N118 509 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 NLRP7Q8WX94 980 aa6.69□□□□□ -1.34
HMGB1P50-201ENST00000605814 FECHP22830 423 aa6.68□□□□□ -1.34
HMGB1P50-201ENST00000605814 RPIAP49247 311 aa6.68□□□□□ -1.34
HMGB1P50-201ENST00000605814 HAP1P54257 671 aaPredicted RBP6.68□□□□□ -1.34
HMGB1P50-201ENST00000605814 SLC27A5Q9Y2P5 690 aa6.67□□□□□ -1.34
HMGB1P50-201ENST00000605814 TTC24A2A3L6 582 aaPredicted RBP6.66□□□□□ -1.34
HMGB1P50-201ENST00000605814 ST8SIA5O15466 376 aa6.66□□□□□ -1.34
HMGB1P50-201ENST00000605814 GCGRP47871 477 aa6.66□□□□□ -1.34
HMGB1P50-201ENST00000605814 Q3C1V9 767 aa6.65□□□□□ -1.34
HMGB1P50-201ENST00000605814 PRDM9Q9NQV7 894 aa6.64□□□□□ -1.35
HMGB1P50-201ENST00000605814 AAASQ9NRG9 546 aa6.64□□□□□ -1.35
HMGB1P50-201ENST00000605814 AXIN1O15169 862 aa6.63□□□□□ -1.35
HMGB1P50-201ENST00000605814 PKD2L1Q9P0L9 805 aa6.63□□□□□ -1.35
HMGB1P50-201ENST00000605814 POTECB2RU33 542 aa6.62□□□□□ -1.35
HMGB1P50-201ENST00000605814 GPR37O15354 613 aa6.62□□□□□ -1.35
HMGB1P50-201ENST00000605814 MSS51Q4VC12 460 aa6.62□□□□□ -1.35
HMGB1P50-201ENST00000605814 FAM160A2Q8N612 972 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P50-201ENST00000605814 THAP11Q96EK4 314 aa6.62□□□□□ -1.35
HMGB1P50-201ENST00000605814 SALL2Q9Y467 1007 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P50-201ENST00000605814 CTC1Q2NKJ3 1217 aa6.61□□□□□ -1.35
HMGB1P50-201ENST00000605814 RNF19BQ6ZMZ0 732 aa6.61□□□□□ -1.35
HMGB1P50-201ENST00000605814 CCDC24Q8N4L8 307 aa6.61□□□□□ -1.35
HMGB1P50-201ENST00000605814 C11orf95C9JLR9 678 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms