RNA–Protein interactions for RNA: ENST00000603546.1

GNAS-256, Transcript of GNAS complex locus, human

TSL 5

Gene GNAS, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GNAS-256	ENST00000603546	ZFYVE9	O95405	1425 aa		41.49	■■■■■ 4.23
GNAS-256	ENST00000603546	TMEM131L	A2VDJ0	1609 aa		41.48	■■■■■ 4.23
GNAS-256	ENST00000603546	XIRP1	Q702N8	1843 aa	Known RBP	41.46	■■■■■ 4.23
GNAS-256	ENST00000603546	RIMS2	Q9UQ26	1411 aa		41.46	■■■■■ 4.23
GNAS-256	ENST00000603546	MYO5B	Q9ULV0	1848 aa		41.46	■■■■■ 4.23
GNAS-256	ENST00000603546	CHGA	P10645	457 aa	Known RBP	41.45	■■■■■ 4.23
GNAS-256	ENST00000603546	PLEKHG1	Q9ULL1	1385 aa		41.44	■■■■■ 4.22
GNAS-256	ENST00000603546	PPP1R15A	O75807	674 aa	Predicted RBP	41.43	■■■■■ 4.22
GNAS-256	ENST00000603546	TMEM94	Q12767	1356 aa		41.42	■■■■■ 4.22
GNAS-256	ENST00000603546	PROSER2	Q86WR7	435 aa	Predicted RBP	41.42	■■■■■ 4.22
GNAS-256	ENST00000603546	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	41.42	■■■■■ 4.22
GNAS-256	ENST00000603546	RRBP1	Q9P2E9	1410 aa	Known RBP	41.41	■■■■■ 4.22
GNAS-256	ENST00000603546	SOCS7	O14512	581 aa		41.39	■■■■■ 4.22
GNAS-256	ENST00000603546	SENP3	Q9H4L4	574 aa	Predicted RBP	41.36	■■■■■ 4.21
GNAS-256	ENST00000603546	TBX22	Q9Y458	520 aa		41.34	■■■■■ 4.21
GNAS-256	ENST00000603546	NKTR	P30414	1462 aa	Known RBP	41.33	■■■■■ 4.21
GNAS-256	ENST00000603546	NWD1	Q149M9	1564 aa		41.33	■■■■■ 4.21
GNAS-256	ENST00000603546	MED1	Q15648	1581 aa	Predicted RBP	41.3	■■■■■ 4.2
GNAS-256	ENST00000603546	RBM33	Q96EV2	1170 aa	Known RBP	41.3	■■■■■ 4.2
GNAS-256	ENST00000603546	NUTM2D	Q5VT03	806 aa	Predicted RBP	41.28	■■■■■ 4.2
GNAS-256	ENST00000603546	FAM135B	Q49AJ0	1406 aa		41.27	■■■■■ 4.2
GNAS-256	ENST00000603546	CHD2	O14647	1828 aa	Known RBP	41.25	■■■■■ 4.19
GNAS-256	ENST00000603546	NAIP	Q13075	1403 aa		41.22	■■■■■ 4.19
GNAS-256	ENST00000603546	ADAMTS13	Q76LX8	1427 aa		41.21	■■■■■ 4.19
GNAS-256	ENST00000603546	MSH6	P52701	1360 aa		41.19	■■■■■ 4.18
GNAS-256	ENST00000603546	SPHKAP	Q2M3C7	1700 aa		41.17	■■■■■ 4.18
GNAS-256	ENST00000603546	PIK3R4	Q99570	1358 aa		41.16	■■■■■ 4.18
GNAS-256	ENST00000603546	DIP2A	Q14689	1571 aa		41.14	■■■■■ 4.18
GNAS-256	ENST00000603546	NCOA3	Q9Y6Q9	1424 aa		41.12	■■■■■ 4.17
GNAS-256	ENST00000603546	PHF23	Q9BUL5	403 aa	Predicted RBP	41.1	■■■■■ 4.17
GNAS-256	ENST00000603546	SLAIN2	Q9P270	581 aa		41.1	■■■■■ 4.17
GNAS-256	ENST00000603546	ZNF326	Q5BKZ1	582 aa	Known RBP	41.09	■■■■■ 4.17
GNAS-256	ENST00000603546	HFM1	A2PYH4	1435 aa		41.08	■■■■■ 4.17
GNAS-256	ENST00000603546	ROBO1	Q9Y6N7	1651 aa		41.06	■■■■■ 4.16
GNAS-256	ENST00000603546	TRIM52	Q96A61	297 aa		41.05	■■■■■ 4.16
GNAS-256	ENST00000603546	AMOTL2	Q9Y2J4	779 aa		41.03	■■■■■ 4.16
GNAS-256	ENST00000603546	TRPM2	O94759	1503 aa		41.03	■■■■■ 4.16
GNAS-256	ENST00000603546	C14orf37	Q86TY3	774 aa		41.01	■■■■■ 4.16
GNAS-256	ENST00000603546	CLTCL1	P53675	1640 aa		40.98	■■■■■ 4.15
GNAS-256	ENST00000603546	C19orf44	Q9H6X5	657 aa		40.98	■■■■■ 4.15
GNAS-256	ENST00000603546	PTPRU	Q92729	1446 aa		40.97	■■■■■ 4.15
GNAS-256	ENST00000603546	SETBP1	Q9Y6X0	1596 aa		40.95	■■■■■ 4.15
GNAS-256	ENST00000603546	CADPS2	Q86UW7	1296 aa		40.94	■■■■■ 4.14
GNAS-256	ENST00000603546	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40.94	■■■■■ 4.14
GNAS-256	ENST00000603546	NRXN3	Q9Y4C0	1643 aa		40.93	■■■■■ 4.14
GNAS-256	ENST00000603546	ATF3	P18847	181 aa		40.9	■■■■■ 4.14
GNAS-256	ENST00000603546	KIF1B	O60333	1816 aa		40.9	■■■■■ 4.14
GNAS-256	ENST00000603546	NEXMIF	Q5QGS0	1516 aa		40.88	■■■■■ 4.14
GNAS-256	ENST00000603546	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	40.87	■■■■■ 4.13
GNAS-256	ENST00000603546	MET	P08581	1390 aa		40.86	■■■■■ 4.13
GNAS-256	ENST00000603546	RGS17	Q9UGC6	210 aa	Predicted RBP	40.83	■■■■■ 4.13
GNAS-256	ENST00000603546	PHLPP1	O60346	1717 aa		40.81	■■■■■ 4.12
GNAS-256	ENST00000603546	VGF	O15240	615 aa	Predicted RBP	40.81	■■■■■ 4.12
GNAS-256	ENST00000603546	XRN1	Q8IZH2	1706 aa	Known RBP	40.81	■■■■■ 4.12
GNAS-256	ENST00000603546	RPGRIP1L	Q68CZ1	1315 aa		40.79	■■■■■ 4.12
GNAS-256	ENST00000603546	JCAD	Q9P266	1359 aa		40.77	■■■■■ 4.12
GNAS-256	ENST00000603546	DCC	P43146	1447 aa		40.75	■■■■■ 4.11
GNAS-256	ENST00000603546	FOXD1	Q16676	465 aa		40.7	■■■■■ 4.11
GNAS-256	ENST00000603546	COL16A1	Q07092	1604 aa	Predicted RBP	40.69	■■■■■ 4.1
GNAS-256	ENST00000603546	BRINP3	Q76B58	766 aa		40.68	■■■■■ 4.1
GNAS-256	ENST00000603546	MPHOSPH9	Q99550	1183 aa		40.67	■■■■■ 4.1
GNAS-256	ENST00000603546	AHDC1	Q5TGY3	1603 aa	Predicted RBP	40.66	■■■■■ 4.1
GNAS-256	ENST00000603546	ADGRL3	Q9HAR2	1447 aa		40.61	■■■■■ 4.09
GNAS-256	ENST00000603546	MST1R	Q04912	1400 aa		40.6	■■■■■ 4.09
GNAS-256	ENST00000603546	SPATA31A6	Q5VVP1	1343 aa		40.6	■■■■■ 4.09
GNAS-256	ENST00000603546	ACIN1	Q9UKV3	1341 aa	Known RBP	40.6	■■■■■ 4.09
GNAS-256	ENST00000603546	POTEA	Q6S8J7	498 aa		40.59	■■■■■ 4.09
GNAS-256	ENST00000603546	CCDC144A	A2RUR9	1427 aa		40.59	■■■■■ 4.09
GNAS-256	ENST00000603546	PPL	O60437	1756 aa		40.58	■■■■■ 4.09
GNAS-256	ENST00000603546	SETD1A	O15047	1707 aa	Known RBP	40.56	■■■■■ 4.08
GNAS-256	ENST00000603546	PTCH1	Q13635	1447 aa		40.55	■■■■■ 4.08
GNAS-256	ENST00000603546	ASXL1	Q8IXJ9	1541 aa		40.52	■■■■■ 4.08
GNAS-256	ENST00000603546	ROBO2	Q9HCK4	1378 aa		40.51	■■■■■ 4.08
GNAS-256	ENST00000603546	RGL3	Q3MIN7	710 aa		40.51	■■■■■ 4.08
GNAS-256	ENST00000603546	PRAG1	Q86YV5	1406 aa		40.5	■■■■■ 4.07
GNAS-256	ENST00000603546	NALCN	Q8IZF0	1738 aa		40.49	■■■■■ 4.07
GNAS-256	ENST00000603546	SPATA31E1	Q6ZUB1	1445 aa		40.49	■■■■■ 4.07
GNAS-256	ENST00000603546	SETD5	Q9C0A6	1442 aa		40.48	■■■■■ 4.07
GNAS-256	ENST00000603546	ADGRF5	Q8IZF2	1346 aa		40.47	■■■■■ 4.07
GNAS-256	ENST00000603546	SHPRH	Q149N8	1683 aa		40.47	■■■■■ 4.07
GNAS-256	ENST00000603546	ANKRD30B	Q9BXX2	1392 aa		40.45	■■■■■ 4.07
GNAS-256	ENST00000603546	LRP6	O75581	1613 aa		40.45	■■■■■ 4.07
GNAS-256	ENST00000603546	MEX3C	Q5U5Q3	659 aa	Known RBP	40.43	■■■■■ 4.06
GNAS-256	ENST00000603546	LRRC59	Q96AG4	307 aa	Known RBP	40.43	■■■■■ 4.06
GNAS-256	ENST00000603546	NHSL1	Q5SYE7	1610 aa		40.41	■■■■■ 4.06
GNAS-256	ENST00000603546	C1orf167	Q5SNV9	1468 aa		40.4	■■■■■ 4.06
GNAS-256	ENST00000603546	DDX17	Q92841	729 aa	Known RBP	40.37	■■■■■ 4.05
GNAS-256	ENST00000603546	NUTM2B	A6NNL0	878 aa	Predicted RBP	40.34	■■■■■ 4.05
GNAS-256	ENST00000603546	NUTM2E	B1AL46	878 aa	Predicted RBP	40.34	■■■■■ 4.05
GNAS-256	ENST00000603546	ZNF772	Q68DY9	489 aa	Predicted RBP	40.34	■■■■■ 4.05
GNAS-256	ENST00000603546	NUTM2A	Q8IVF1	878 aa	Predicted RBP	40.34	■■■■■ 4.05
GNAS-256	ENST00000603546	IFT172	Q9UG01	1749 aa		40.33	■■■■■ 4.05
GNAS-256	ENST00000603546	ORAI2	Q96SN7	254 aa		40.31	■■■■■ 4.04
GNAS-256	ENST00000603546	RAB3GAP2	Q9H2M9	1393 aa		40.3	■■■■■ 4.04
GNAS-256	ENST00000603546	STK26	Q9P289	416 aa		40.29	■■■■■ 4.04
GNAS-256	ENST00000603546	LRPPRC	P42704	1394 aa	Known RBP	40.28	■■■■■ 4.04
GNAS-256	ENST00000603546	PIK3C2G	O75747	1445 aa		40.26	■■■■■ 4.04
GNAS-256	ENST00000603546	ABCC11	Q96J66	1382 aa		40.26	■■■■■ 4.04
GNAS-256	ENST00000603546	TMEM132E	Q6IEE7	984 aa		40.26	■■■■■ 4.04
GNAS-256	ENST00000603546	TECPR2	O15040	1411 aa		40.25	■■■■■ 4.03

Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms