RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 ROCK1Q13464 1354 aa16.07■□□□□ 0.16
FARP1-240ENST00000602263 NKTRP30414 1462 aaKnown RBP16.07■□□□□ 0.16
FARP1-240ENST00000602263 NWD1Q149M9 1564 aa16.07■□□□□ 0.16
FARP1-240ENST00000602263 TMEM131LA2VDJ0 1609 aa16.07■□□□□ 0.16
FARP1-240ENST00000602263 IQGAP3Q86VI3 1631 aa16.07■□□□□ 0.16
FARP1-240ENST00000602263 E9PCH4 1651 aa16.07■□□□□ 0.16
FARP1-240ENST00000602263 PPP1R15AO75807 674 aaPredicted RBP16.06■□□□□ 0.16
FARP1-240ENST00000602263 HDGFP51858 240 aaKnown RBP16.06■□□□□ 0.16
FARP1-240ENST00000602263 PROSER2Q86WR7 435 aaPredicted RBP16.05■□□□□ 0.16
FARP1-240ENST00000602263 CHD2O14647 1828 aaKnown RBP16.05■□□□□ 0.16
FARP1-240ENST00000602263 ZFYVE9O95405 1425 aa16.04■□□□□ 0.16
FARP1-240ENST00000602263 RIMS2Q9UQ26 1411 aa16.04■□□□□ 0.16
FARP1-240ENST00000602263 PLEKHG1Q9ULL1 1385 aa16.03■□□□□ 0.16
FARP1-240ENST00000602263 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.16
FARP1-240ENST00000602263 ROBO1Q9Y6N7 1651 aa16.02■□□□□ 0.16
FARP1-240ENST00000602263 CHGAP10645 457 aaKnown RBP16.02■□□□□ 0.16
FARP1-240ENST00000602263 MSH6P52701 1360 aa16.01■□□□□ 0.15
FARP1-240ENST00000602263 ITGAEP38570 1179 aa16.01■□□□□ 0.15
FARP1-240ENST00000602263 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
FARP1-240ENST00000602263 NUP155O75694 1391 aa16■□□□□ 0.15
FARP1-240ENST00000602263 RBM33Q96EV2 1170 aaKnown RBP15.99■□□□□ 0.15
FARP1-240ENST00000602263 DIP2AQ14689 1571 aa15.99■□□□□ 0.15
FARP1-240ENST00000602263 SPHKAPQ2M3C7 1700 aa15.98■□□□□ 0.15
FARP1-240ENST00000602263 TBX22Q9Y458 520 aa15.96■□□□□ 0.15
FARP1-240ENST00000602263 PHLPP1O60346 1717 aa15.96■□□□□ 0.15
FARP1-240ENST00000602263 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
FARP1-240ENST00000602263 NUTM2DQ5VT03 806 aaPredicted RBP15.94■□□□□ 0.14
FARP1-240ENST00000602263 C14orf37Q86TY3 774 aa15.94■□□□□ 0.14
FARP1-240ENST00000602263 TRPM2O94759 1503 aa15.94■□□□□ 0.14
FARP1-240ENST00000602263 PIK3R4Q99570 1358 aa15.93■□□□□ 0.14
FARP1-240ENST00000602263 SLAIN2Q9P270 581 aa15.93■□□□□ 0.14
FARP1-240ENST00000602263 ADAMTS13Q76LX8 1427 aa15.93■□□□□ 0.14
FARP1-240ENST00000602263 NCOA3Q9Y6Q9 1424 aa15.93■□□□□ 0.14
FARP1-240ENST00000602263 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
FARP1-240ENST00000602263 KIF1BO60333 1816 aa15.89■□□□□ 0.13
FARP1-240ENST00000602263 ATF3P18847 181 aa15.87■□□□□ 0.13
FARP1-240ENST00000602263 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
FARP1-240ENST00000602263 CADPS2Q86UW7 1296 aa15.87■□□□□ 0.13
FARP1-240ENST00000602263 SETBP1Q9Y6X0 1596 aa15.87■□□□□ 0.13
FARP1-240ENST00000602263 JCADQ9P266 1359 aa15.87■□□□□ 0.13
FARP1-240ENST00000602263 COL16A1Q07092 1604 aaPredicted RBP15.86■□□□□ 0.13
FARP1-240ENST00000602263 NRXN3Q9Y4C0 1643 aa15.86■□□□□ 0.13
FARP1-240ENST00000602263 RRBP1Q9P2E9 1410 aaKnown RBP15.86■□□□□ 0.13
FARP1-240ENST00000602263 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
FARP1-240ENST00000602263 RGS17Q9UGC6 210 aaPredicted RBP15.86■□□□□ 0.13
FARP1-240ENST00000602263 XRN1Q8IZH2 1706 aaKnown RBP15.85■□□□□ 0.13
FARP1-240ENST00000602263 AMOTL2Q9Y2J4 779 aa15.85■□□□□ 0.13
FARP1-240ENST00000602263 CLTCL1P53675 1640 aa15.85■□□□□ 0.13
FARP1-240ENST00000602263 AHDC1Q5TGY3 1603 aaPredicted RBP15.83■□□□□ 0.13
FARP1-240ENST00000602263 PTPRUQ92729 1446 aa15.83■□□□□ 0.12
FARP1-240ENST00000602263 DCCP43146 1447 aa15.82■□□□□ 0.12
FARP1-240ENST00000602263 NAIPQ13075 1403 aa15.82■□□□□ 0.12
FARP1-240ENST00000602263 SHPRHQ149N8 1683 aa15.82■□□□□ 0.12
FARP1-240ENST00000602263 NEXMIFQ5QGS0 1516 aa15.81■□□□□ 0.12
FARP1-240ENST00000602263 SPATA31A6Q5VVP1 1343 aa15.79■□□□□ 0.12
FARP1-240ENST00000602263 POTEAQ6S8J7 498 aa15.79■□□□□ 0.12
FARP1-240ENST00000602263 MEX3CQ5U5Q3 659 aaKnown RBP15.78■□□□□ 0.12
FARP1-240ENST00000602263 TRIM52Q96A61 297 aa15.78■□□□□ 0.12
FARP1-240ENST00000602263 HFM1A2PYH4 1435 aa15.77■□□□□ 0.12
FARP1-240ENST00000602263 METP08581 1390 aa15.77■□□□□ 0.12
FARP1-240ENST00000602263 ASXL1Q8IXJ9 1541 aa15.77■□□□□ 0.11
FARP1-240ENST00000602263 NALCNQ8IZF0 1738 aa15.76■□□□□ 0.11
FARP1-240ENST00000602263 NHSL1Q5SYE7 1610 aa15.76■□□□□ 0.11
FARP1-240ENST00000602263 SETD1AO15047 1707 aaKnown RBP15.75■□□□□ 0.11
FARP1-240ENST00000602263 BRINP3Q76B58 766 aa15.75■□□□□ 0.11
FARP1-240ENST00000602263 ADGRL3Q9HAR2 1447 aa15.75■□□□□ 0.11
FARP1-240ENST00000602263 LRP6O75581 1613 aa15.75■□□□□ 0.11
FARP1-240ENST00000602263 MST1RQ04912 1400 aa15.74■□□□□ 0.11
FARP1-240ENST00000602263 PPLO60437 1756 aa15.74■□□□□ 0.11
FARP1-240ENST00000602263 VGFO15240 615 aaPredicted RBP15.73■□□□□ 0.11
FARP1-240ENST00000602263 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
FARP1-240ENST00000602263 PTCH1Q13635 1447 aa15.71■□□□□ 0.11
FARP1-240ENST00000602263 ZNF772Q68DY9 489 aaPredicted RBP15.71■□□□□ 0.11
FARP1-240ENST00000602263 RPGRIP1LQ68CZ1 1315 aa15.7■□□□□ 0.1
FARP1-240ENST00000602263 SETD5Q9C0A6 1442 aa15.69■□□□□ 0.1
FARP1-240ENST00000602263 NUTM2BA6NNL0 878 aaPredicted RBP15.68■□□□□ 0.1
FARP1-240ENST00000602263 NUTM2EB1AL46 878 aaPredicted RBP15.68■□□□□ 0.1
FARP1-240ENST00000602263 NUTM2AQ8IVF1 878 aaPredicted RBP15.68■□□□□ 0.1
FARP1-240ENST00000602263 LRRC59Q96AG4 307 aaKnown RBP15.67■□□□□ 0.1
FARP1-240ENST00000602263 CCDC144AA2RUR9 1427 aa15.66■□□□□ 0.1
FARP1-240ENST00000602263 PRAG1Q86YV5 1406 aa15.66■□□□□ 0.1
FARP1-240ENST00000602263 ROBO2Q9HCK4 1378 aa15.65■□□□□ 0.1
FARP1-240ENST00000602263 C1orf167Q5SNV9 1468 aa15.65■□□□□ 0.1
FARP1-240ENST00000602263 LAMC1P11047 1609 aa15.64■□□□□ 0.09
FARP1-240ENST00000602263 IFT172Q9UG01 1749 aa15.63■□□□□ 0.09
FARP1-240ENST00000602263 RXRBP28702 533 aa15.62■□□□□ 0.09
FARP1-240ENST00000602263 FOXD1Q16676 465 aa15.62■□□□□ 0.09
FARP1-240ENST00000602263 DDX17Q92841 729 aaKnown RBP15.62■□□□□ 0.09
FARP1-240ENST00000602263 PNPLA6Q8IY17 1366 aa15.62■□□□□ 0.09
FARP1-240ENST00000602263 AFF2P51816 1311 aa15.61■□□□□ 0.09
FARP1-240ENST00000602263 CDC42BPGQ6DT37 1551 aa15.61■□□□□ 0.09
FARP1-240ENST00000602263 CDK12Q9NYV4 1490 aaPredicted RBP15.59■□□□□ 0.09
FARP1-240ENST00000602263 C8orf37Q96NL8 207 aa15.59■□□□□ 0.09
FARP1-240ENST00000602263 KNDC1Q76NI1 1749 aa15.59■□□□□ 0.09
FARP1-240ENST00000602263 ANKRD30BQ9BXX2 1392 aa15.59■□□□□ 0.09
FARP1-240ENST00000602263 RGL3Q3MIN7 710 aa15.58■□□□□ 0.08
FARP1-240ENST00000602263 ORAI2Q96SN7 254 aa15.58■□□□□ 0.08
FARP1-240ENST00000602263 MPHOSPH9Q99550 1183 aa15.58■□□□□ 0.08
FARP1-240ENST00000602263 SPATA31E1Q6ZUB1 1445 aa15.58■□□□□ 0.08
FARP1-240ENST00000602263 ADGRF5Q8IZF2 1346 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms