RNA–Protein interactions for RNA: ENST00000599225.1

LTBP4-225, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 281 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-225ENST00000599225 PLEKHG1Q9ULL1 1385 aa24.57■■□□□ 1.52
LTBP4-225ENST00000599225 RIMS2Q9UQ26 1411 aa24.57■■□□□ 1.52
LTBP4-225ENST00000599225 SCAF1Q9H7N4 1312 aaKnown RBP24.57■■□□□ 1.52
LTBP4-225ENST00000599225 MYO5BQ9ULV0 1848 aa24.55■■□□□ 1.52
LTBP4-225ENST00000599225 NAIPQ13075 1403 aa24.54■■□□□ 1.52
LTBP4-225ENST00000599225 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.54■■□□□ 1.524e-7■□□□□ 9.2
LTBP4-225ENST00000599225 XIRP1Q702N8 1843 aaKnown RBP24.52■■□□□ 1.52
LTBP4-225ENST00000599225 TMEM94Q12767 1356 aa24.51■■□□□ 1.51
LTBP4-225ENST00000599225 NWD1Q149M9 1564 aa24.5■■□□□ 1.51
LTBP4-225ENST00000599225 PPP1R15AO75807 674 aaPredicted RBP24.5■■□□□ 1.51
LTBP4-225ENST00000599225 TBX22Q9Y458 520 aa24.5■■□□□ 1.51
LTBP4-225ENST00000599225 NKTRP30414 1462 aaKnown RBP24.5■■□□□ 1.51
LTBP4-225ENST00000599225 CHGAP10645 457 aaKnown RBP24.49■■□□□ 1.51
LTBP4-225ENST00000599225 HFM1A2PYH4 1435 aa24.49■■□□□ 1.51
LTBP4-225ENST00000599225 ILDR2Q71H61 639 aa24.48■■□□□ 1.51
LTBP4-225ENST00000599225 PROSER2Q86WR7 435 aaPredicted RBP24.47■■□□□ 1.51
LTBP4-225ENST00000599225 BCANQ96GW7 911 aa24.47■■□□□ 1.51
LTBP4-225ENST00000599225 ADAMTS13Q76LX8 1427 aa24.44■■□□□ 1.5
LTBP4-225ENST00000599225 SPHKAPQ2M3C7 1700 aa24.43■■□□□ 1.5
LTBP4-225ENST00000599225 FAM135BQ49AJ0 1406 aa24.43■■□□□ 1.5
LTBP4-225ENST00000599225 PIK3R4Q99570 1358 aa24.42■■□□□ 1.5
LTBP4-225ENST00000599225 CHD2O14647 1828 aaKnown RBP24.42■■□□□ 1.5
LTBP4-225ENST00000599225 DIP2AQ14689 1571 aa24.41■■□□□ 1.5
LTBP4-225ENST00000599225 NUTM2DQ5VT03 806 aaPredicted RBP24.4■■□□□ 1.5
LTBP4-225ENST00000599225 NCOA3Q9Y6Q9 1424 aa24.39■■□□□ 1.5
LTBP4-225ENST00000599225 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
LTBP4-225ENST00000599225 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
LTBP4-225ENST00000599225 TRPM2O94759 1503 aa24.38■■□□□ 1.49
LTBP4-225ENST00000599225 MED1Q15648 1581 aaPredicted RBP24.35■■□□□ 1.49
LTBP4-225ENST00000599225 MSH6P52701 1360 aa24.35■■□□□ 1.49
LTBP4-225ENST00000599225 CLTCL1P53675 1640 aa24.33■■□□□ 1.49
LTBP4-225ENST00000599225 SOCS7O14512 581 aa24.32■■□□□ 1.48
LTBP4-225ENST00000599225 TRIM52Q96A61 297 aa24.32■■□□□ 1.48
LTBP4-225ENST00000599225 SETBP1Q9Y6X0 1596 aa24.32■■□□□ 1.48
LTBP4-225ENST00000599225 SLAIN2Q9P270 581 aa24.31■■□□□ 1.48
LTBP4-225ENST00000599225 ZNF326Q5BKZ1 582 aaKnown RBP24.3■■□□□ 1.48
LTBP4-225ENST00000599225 SLC4A1APQ9BWU0 796 aaKnown RBP24.3■■□□□ 1.48
LTBP4-225ENST00000599225 PTPRUQ92729 1446 aa24.29■■□□□ 1.48
LTBP4-225ENST00000599225 NRXN3Q9Y4C0 1643 aa24.29■■□□□ 1.48
LTBP4-225ENST00000599225 AMOTL2Q9Y2J4 779 aa24.29■■□□□ 1.48
LTBP4-225ENST00000599225 NEXMIFQ5QGS0 1516 aa24.28■■□□□ 1.48
LTBP4-225ENST00000599225 C19orf44Q9H6X5 657 aa24.26■■□□□ 1.47
LTBP4-225ENST00000599225 ROBO1Q9Y6N7 1651 aa24.26■■□□□ 1.47
LTBP4-225ENST00000599225 KIF1BO60333 1816 aa24.24■■□□□ 1.47
LTBP4-225ENST00000599225 CADPS2Q86UW7 1296 aa24.23■■□□□ 1.47
LTBP4-225ENST00000599225 RPGRIP1LQ68CZ1 1315 aa24.23■■□□□ 1.47
LTBP4-225ENST00000599225 METP08581 1390 aa24.23■■□□□ 1.47
LTBP4-225ENST00000599225 XRN1Q8IZH2 1706 aaKnown RBP24.21■■□□□ 1.47
LTBP4-225ENST00000599225 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
LTBP4-225ENST00000599225 ACIN1Q9UKV3 1341 aaKnown RBP24.19■■□□□ 1.46
LTBP4-225ENST00000599225 C14orf37Q86TY3 774 aa24.19■■□□□ 1.46
LTBP4-225ENST00000599225 DCCP43146 1447 aa24.18■■□□□ 1.46
LTBP4-225ENST00000599225 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.18■■□□□ 1.46
LTBP4-225ENST00000599225 ATF3P18847 181 aa24.17■■□□□ 1.46
LTBP4-225ENST00000599225 MPHOSPH9Q99550 1183 aa24.17■■□□□ 1.46
LTBP4-225ENST00000599225 PHF23Q9BUL5 403 aaPredicted RBP24.16■■□□□ 1.46
LTBP4-225ENST00000599225 FOXD1Q16676 465 aa24.15■■□□□ 1.46
LTBP4-225ENST00000599225 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
LTBP4-225ENST00000599225 PRAG1Q86YV5 1406 aa24.11■■□□□ 1.45
LTBP4-225ENST00000599225 SETD5Q9C0A6 1442 aa24.1■■□□□ 1.45
LTBP4-225ENST00000599225 RGS17Q9UGC6 210 aaPredicted RBP24.1■■□□□ 1.45
LTBP4-225ENST00000599225 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
LTBP4-225ENST00000599225 SPATA31E1Q6ZUB1 1445 aa24.1■■□□□ 1.45
LTBP4-225ENST00000599225 JCADQ9P266 1359 aa24.09■■□□□ 1.45
LTBP4-225ENST00000599225 SETD1AO15047 1707 aaKnown RBP24.09■■□□□ 1.45
LTBP4-225ENST00000599225 PTCH1Q13635 1447 aa24.09■■□□□ 1.45
LTBP4-225ENST00000599225 PPLO60437 1756 aa24.08■■□□□ 1.45
LTBP4-225ENST00000599225 ADGRL3Q9HAR2 1447 aa24.08■■□□□ 1.44
LTBP4-225ENST00000599225 COL16A1Q07092 1604 aaPredicted RBP24.07■■□□□ 1.44
LTBP4-225ENST00000599225 AHDC1Q5TGY3 1603 aaPredicted RBP24.07■■□□□ 1.44
LTBP4-225ENST00000599225 BRINP3Q76B58 766 aa24.07■■□□□ 1.44
LTBP4-225ENST00000599225 MST1RQ04912 1400 aa24.06■■□□□ 1.44
LTBP4-225ENST00000599225 ANKRD30BQ9BXX2 1392 aa24.04■■□□□ 1.44
LTBP4-225ENST00000599225 ROBO2Q9HCK4 1378 aa24.03■■□□□ 1.44
LTBP4-225ENST00000599225 ADGRF5Q8IZF2 1346 aa24.02■■□□□ 1.44
LTBP4-225ENST00000599225 RGL3Q3MIN7 710 aa24■■□□□ 1.43
LTBP4-225ENST00000599225 SPATA31A6Q5VVP1 1343 aa24■■□□□ 1.43
LTBP4-225ENST00000599225 RAB3GAP2Q9H2M9 1393 aa24■■□□□ 1.43
LTBP4-225ENST00000599225 ASXL1Q8IXJ9 1541 aa24■■□□□ 1.43
LTBP4-225ENST00000599225 NALCNQ8IZF0 1738 aa23.98■■□□□ 1.43
LTBP4-225ENST00000599225 IFT172Q9UG01 1749 aa23.96■■□□□ 1.43
LTBP4-225ENST00000599225 HRCP23327 699 aa23.95■■□□□ 1.42
LTBP4-225ENST00000599225 C1orf167Q5SNV9 1468 aa23.94■■□□□ 1.42
LTBP4-225ENST00000599225 TECPR2O15040 1411 aa23.94■■□□□ 1.42
LTBP4-225ENST00000599225 PIK3C2GO75747 1445 aa23.94■■□□□ 1.42
LTBP4-225ENST00000599225 POTEAQ6S8J7 498 aa23.94■■□□□ 1.42
LTBP4-225ENST00000599225 SHPRHQ149N8 1683 aa23.93■■□□□ 1.42
LTBP4-225ENST00000599225 NHSL1Q5SYE7 1610 aa23.92■■□□□ 1.42
LTBP4-225ENST00000599225 LRPPRCP42704 1394 aaKnown RBP23.91■■□□□ 1.42
LTBP4-225ENST00000599225 ABCC11Q96J66 1382 aa23.91■■□□□ 1.42
LTBP4-225ENST00000599225 LRP6O75581 1613 aa23.91■■□□□ 1.42
LTBP4-225ENST00000599225 NRXN1Q9ULB1 1477 aa23.9■■□□□ 1.42
LTBP4-225ENST00000599225 LRRC59Q96AG4 307 aaKnown RBP23.9■■□□□ 1.42
LTBP4-225ENST00000599225 LAMC1P11047 1609 aa23.88■■□□□ 1.41
LTBP4-225ENST00000599225 C14orf93Q9H972 538 aaKnown RBP23.87■■□□□ 1.41
LTBP4-225ENST00000599225 MYOM2P54296 1465 aa23.87■■□□□ 1.41
LTBP4-225ENST00000599225 TMEM132EQ6IEE7 984 aa23.85■■□□□ 1.41
LTBP4-225ENST00000599225 DDX17Q92841 729 aaKnown RBP23.85■■□□□ 1.41
LTBP4-225ENST00000599225 SIRT1Q96EB6 747 aa23.85■■□□□ 1.41
LTBP4-225ENST00000599225 ORAI2Q96SN7 254 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms