RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 RPRD2Q5VT52 1461 aaKnown RBP17.05■□□□□ 0.32
GRAMD1A-209ENST00000598580 NUTM2DQ5VT03 806 aaPredicted RBP17.05■□□□□ 0.32
GRAMD1A-209ENST00000598580 RIMS2Q9UQ26 1411 aa17.04■□□□□ 0.32
GRAMD1A-209ENST00000598580 ROCK1Q13464 1354 aa17.03■□□□□ 0.32
GRAMD1A-209ENST00000598580 PLEKHG1Q9ULL1 1385 aa17.03■□□□□ 0.32
GRAMD1A-209ENST00000598580 BCANQ96GW7 911 aa17.03■□□□□ 0.32
GRAMD1A-209ENST00000598580 PHF23Q9BUL5 403 aaPredicted RBP17.03■□□□□ 0.32
GRAMD1A-209ENST00000598580 ITGAEP38570 1179 aa17.02■□□□□ 0.32
GRAMD1A-209ENST00000598580 TMEM131LA2VDJ0 1609 aa17.02■□□□□ 0.31
GRAMD1A-209ENST00000598580 UNC13BO14795 1591 aa17.01■□□□□ 0.31
GRAMD1A-209ENST00000598580 NWD1Q149M9 1564 aa17.01■□□□□ 0.31
GRAMD1A-209ENST00000598580 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
GRAMD1A-209ENST00000598580 ADAMTS13Q76LX8 1427 aa17■□□□□ 0.31
GRAMD1A-209ENST00000598580 TBX22Q9Y458 520 aa17■□□□□ 0.31
GRAMD1A-209ENST00000598580 MYO5BQ9ULV0 1848 aa16.99■□□□□ 0.31
GRAMD1A-209ENST00000598580 SLAIN2Q9P270 581 aa16.99■□□□□ 0.31
GRAMD1A-209ENST00000598580 NUP155O75694 1391 aa16.99■□□□□ 0.31
GRAMD1A-209ENST00000598580 E9PCH4 1651 aa16.98■□□□□ 0.31
GRAMD1A-209ENST00000598580 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
GRAMD1A-209ENST00000598580 NKTRP30414 1462 aaKnown RBP16.98■□□□□ 0.31
GRAMD1A-209ENST00000598580 GCC2Q8IWJ2 1684 aa16.97■□□□□ 0.31
GRAMD1A-209ENST00000598580 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
GRAMD1A-209ENST00000598580 ROBO1Q9Y6N7 1651 aa16.95■□□□□ 0.3
GRAMD1A-209ENST00000598580 MSH6P52701 1360 aa16.94■□□□□ 0.3
GRAMD1A-209ENST00000598580 HDGFP51858 240 aaKnown RBP16.94■□□□□ 0.3
GRAMD1A-209ENST00000598580 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.94■□□□□ 0.3
GRAMD1A-209ENST00000598580 IQGAP3Q86VI3 1631 aa16.94■□□□□ 0.3
GRAMD1A-209ENST00000598580 PTPRUQ92729 1446 aa16.94■□□□□ 0.3
GRAMD1A-209ENST00000598580 CHD2O14647 1828 aaKnown RBP16.93■□□□□ 0.3
GRAMD1A-209ENST00000598580 AMOTL2Q9Y2J4 779 aa16.9■□□□□ 0.3
GRAMD1A-209ENST00000598580 C19orf44Q9H6X5 657 aa16.88■□□□□ 0.29
GRAMD1A-209ENST00000598580 NCOA3Q9Y6Q9 1424 aa16.87■□□□□ 0.29
GRAMD1A-209ENST00000598580 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
GRAMD1A-209ENST00000598580 METP08581 1390 aa16.86■□□□□ 0.29
GRAMD1A-209ENST00000598580 C14orf37Q86TY3 774 aa16.85■□□□□ 0.29
GRAMD1A-209ENST00000598580 JCADQ9P266 1359 aa16.84■□□□□ 0.29
GRAMD1A-209ENST00000598580 NRXN3Q9Y4C0 1643 aa16.84■□□□□ 0.29
GRAMD1A-209ENST00000598580 COL16A1Q07092 1604 aaPredicted RBP16.83■□□□□ 0.28
GRAMD1A-209ENST00000598580 NAIPQ13075 1403 aa16.83■□□□□ 0.28
GRAMD1A-209ENST00000598580 BRINP3Q76B58 766 aa16.83■□□□□ 0.28
GRAMD1A-209ENST00000598580 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
GRAMD1A-209ENST00000598580 PHLPP1O60346 1717 aa16.82■□□□□ 0.28
GRAMD1A-209ENST00000598580 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.82■□□□□ 0.28
GRAMD1A-209ENST00000598580 LRP6O75581 1613 aa16.82■□□□□ 0.28
GRAMD1A-209ENST00000598580 RRBP1Q9P2E9 1410 aaKnown RBP16.82■□□□□ 0.28
GRAMD1A-209ENST00000598580 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
GRAMD1A-209ENST00000598580 ATF3P18847 181 aa16.81■□□□□ 0.28
GRAMD1A-209ENST00000598580 ZNF326Q5BKZ1 582 aaKnown RBP16.81■□□□□ 0.28
GRAMD1A-209ENST00000598580 TRPM2O94759 1503 aa16.8■□□□□ 0.28
GRAMD1A-209ENST00000598580 SETBP1Q9Y6X0 1596 aa16.79■□□□□ 0.28
GRAMD1A-209ENST00000598580 DDX17Q92841 729 aaKnown RBP16.78■□□□□ 0.28
GRAMD1A-209ENST00000598580 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
GRAMD1A-209ENST00000598580 SPHKAPQ2M3C7 1700 aa16.77■□□□□ 0.28
GRAMD1A-209ENST00000598580 XRN1Q8IZH2 1706 aaKnown RBP16.77■□□□□ 0.28
GRAMD1A-209ENST00000598580 AHDC1Q5TGY3 1603 aaPredicted RBP16.77■□□□□ 0.27
GRAMD1A-209ENST00000598580 NEXMIFQ5QGS0 1516 aa16.76■□□□□ 0.27
GRAMD1A-209ENST00000598580 MST1RQ04912 1400 aa16.76■□□□□ 0.27
GRAMD1A-209ENST00000598580 SPATA31A6Q5VVP1 1343 aa16.75■□□□□ 0.27
GRAMD1A-209ENST00000598580 FOXD1Q16676 465 aa16.73■□□□□ 0.27
GRAMD1A-209ENST00000598580 DCCP43146 1447 aa16.72■□□□□ 0.27
GRAMD1A-209ENST00000598580 TRIM52Q96A61 297 aa16.72■□□□□ 0.27
GRAMD1A-209ENST00000598580 HFM1A2PYH4 1435 aa16.71■□□□□ 0.27
GRAMD1A-209ENST00000598580 ASXL1Q8IXJ9 1541 aa16.71■□□□□ 0.27
GRAMD1A-209ENST00000598580 NUTM2BA6NNL0 878 aaPredicted RBP16.71■□□□□ 0.27
GRAMD1A-209ENST00000598580 NUTM2EB1AL46 878 aaPredicted RBP16.71■□□□□ 0.27
GRAMD1A-209ENST00000598580 NUTM2AQ8IVF1 878 aaPredicted RBP16.71■□□□□ 0.27
GRAMD1A-209ENST00000598580 ROBO2Q9HCK4 1378 aa16.71■□□□□ 0.27
GRAMD1A-209ENST00000598580 ADGRL3Q9HAR2 1447 aa16.7■□□□□ 0.26
GRAMD1A-209ENST00000598580 MEX3CQ5U5Q3 659 aaKnown RBP16.69■□□□□ 0.26
GRAMD1A-209ENST00000598580 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
GRAMD1A-209ENST00000598580 SETD5Q9C0A6 1442 aa16.69■□□□□ 0.26
GRAMD1A-209ENST00000598580 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
GRAMD1A-209ENST00000598580 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
GRAMD1A-209ENST00000598580 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
GRAMD1A-209ENST00000598580 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
GRAMD1A-209ENST00000598580 ZNF772Q68DY9 489 aaPredicted RBP16.66■□□□□ 0.26
GRAMD1A-209ENST00000598580 C1orf167Q5SNV9 1468 aa16.66■□□□□ 0.26
GRAMD1A-209ENST00000598580 LRRC59Q96AG4 307 aaKnown RBP16.65■□□□□ 0.26
GRAMD1A-209ENST00000598580 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
GRAMD1A-209ENST00000598580 PNPLA6Q8IY17 1366 aa16.64■□□□□ 0.26
GRAMD1A-209ENST00000598580 NALCNQ8IZF0 1738 aa16.64■□□□□ 0.25
GRAMD1A-209ENST00000598580 AFF2P51816 1311 aa16.64■□□□□ 0.25
GRAMD1A-209ENST00000598580 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
GRAMD1A-209ENST00000598580 UPF1Q92900 1129 aaKnown RBP eCLIP16.63■□□□□ 0.25
GRAMD1A-209ENST00000598580 NHSL1Q5SYE7 1610 aa16.63■□□□□ 0.25
GRAMD1A-209ENST00000598580 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
GRAMD1A-209ENST00000598580 KIF1BO60333 1816 aa16.61■□□□□ 0.25
GRAMD1A-209ENST00000598580 RXRBP28702 533 aa16.61■□□□□ 0.25
GRAMD1A-209ENST00000598580 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
GRAMD1A-209ENST00000598580 PRAG1Q86YV5 1406 aa16.61■□□□□ 0.25
GRAMD1A-209ENST00000598580 RGL3Q3MIN7 710 aa16.59■□□□□ 0.25
GRAMD1A-209ENST00000598580 C8orf37Q96NL8 207 aa16.59■□□□□ 0.25
GRAMD1A-209ENST00000598580 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
GRAMD1A-209ENST00000598580 SPATA31E1Q6ZUB1 1445 aa16.59■□□□□ 0.25
GRAMD1A-209ENST00000598580 WAPLQ7Z5K2 1190 aa16.58■□□□□ 0.24
GRAMD1A-209ENST00000598580 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
GRAMD1A-209ENST00000598580 TMEM132EQ6IEE7 984 aa16.57■□□□□ 0.24
GRAMD1A-209ENST00000598580 QTRT2Q9H974 415 aaKnown RBP16.57■□□□□ 0.24
GRAMD1A-209ENST00000598580 PPLO60437 1756 aa16.56■□□□□ 0.24
GRAMD1A-209ENST00000598580 STK26Q9P289 416 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms