RNA–Protein interactions for RNA: ENST00000593817.1

LRMDA-210, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 3

Gene LRMDA, Length 221 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-210ENST00000593817 PHF23Q9BUL5 403 aaPredicted RBP7.96□□□□□ -1.14
LRMDA-210ENST00000593817 FAM135BQ49AJ0 1406 aa7.95□□□□□ -1.14
LRMDA-210ENST00000593817 NRXN3Q9Y4C0 1643 aa7.95□□□□□ -1.14
LRMDA-210ENST00000593817 ANKRD30AQ9BXX3 1397 aa7.95□□□□□ -1.14
LRMDA-210ENST00000593817 NKTRP30414 1462 aaKnown RBP7.94□□□□□ -1.14
LRMDA-210ENST00000593817 IQGAP3Q86VI3 1631 aa7.94□□□□□ -1.14
LRMDA-210ENST00000593817 POTEAQ6S8J7 498 aa7.94□□□□□ -1.14
LRMDA-210ENST00000593817 EID1Q9Y6B2 187 aa7.94□□□□□ -1.14
LRMDA-210ENST00000593817 KANK1Q14678 1352 aa7.94□□□□□ -1.14
LRMDA-210ENST00000593817 SPHKAPQ2M3C7 1700 aa7.93□□□□□ -1.14
LRMDA-210ENST00000593817 KCNA6P17658 529 aa7.93□□□□□ -1.14
LRMDA-210ENST00000593817 PROSER2Q86WR7 435 aaPredicted RBP7.93□□□□□ -1.14
LRMDA-210ENST00000593817 LRP6O75581 1613 aa7.92□□□□□ -1.14
LRMDA-210ENST00000593817 SHPRHQ149N8 1683 aa7.92□□□□□ -1.14
LRMDA-210ENST00000593817 STAG3Q9UJ98 1225 aa7.92□□□□□ -1.14
LRMDA-210ENST00000593817 ADAMTS13Q76LX8 1427 aa7.92□□□□□ -1.14
LRMDA-210ENST00000593817 ANKRD50Q9ULJ7 1429 aa7.92□□□□□ -1.14
LRMDA-210ENST00000593817 RIMS2Q9UQ26 1411 aa7.92□□□□□ -1.14
LRMDA-210ENST00000593817 RPRD2Q5VT52 1461 aaKnown RBP7.92□□□□□ -1.14
LRMDA-210ENST00000593817 XRN1Q8IZH2 1706 aaKnown RBP7.92□□□□□ -1.14
LRMDA-210ENST00000593817 NUTM2DQ5VT03 806 aaPredicted RBP7.91□□□□□ -1.14
LRMDA-210ENST00000593817 PLEKHG1Q9ULL1 1385 aa7.91□□□□□ -1.14
LRMDA-210ENST00000593817 DIP2AQ14689 1571 aa7.9□□□□□ -1.14
LRMDA-210ENST00000593817 PTPRUQ92729 1446 aa7.9□□□□□ -1.14
LRMDA-210ENST00000593817 FAM50AQ14320 339 aaKnown RBP7.9□□□□□ -1.14
LRMDA-210ENST00000593817 NALCNQ8IZF0 1738 aa7.89□□□□□ -1.15
LRMDA-210ENST00000593817 NHSL1Q5SYE7 1610 aa7.89□□□□□ -1.15
LRMDA-210ENST00000593817 AHDC1Q5TGY3 1603 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-210ENST00000593817 MSH6P52701 1360 aa7.88□□□□□ -1.15
LRMDA-210ENST00000593817 KIF1BO60333 1816 aa7.88□□□□□ -1.15
LRMDA-210ENST00000593817 APLP2Q06481 763 aa7.88□□□□□ -1.15
LRMDA-210ENST00000593817 SLC52A1Q9NWF4 448 aa7.88□□□□□ -1.15
LRMDA-210ENST00000593817 SLAIN2Q9P270 581 aa7.88□□□□□ -1.15
LRMDA-210ENST00000593817 CLTCL1P53675 1640 aa7.88□□□□□ -1.15
LRMDA-210ENST00000593817 TRPM2O94759 1503 aa7.87□□□□□ -1.15
LRMDA-210ENST00000593817 SETBP1Q9Y6X0 1596 aa7.86□□□□□ -1.15
LRMDA-210ENST00000593817 SLC24A1O60721 1099 aa7.86□□□□□ -1.15
LRMDA-210ENST00000593817 BCANQ96GW7 911 aa7.86□□□□□ -1.15
LRMDA-210ENST00000593817 JCADQ9P266 1359 aa7.85□□□□□ -1.15
LRMDA-210ENST00000593817 NEXMIFQ5QGS0 1516 aa7.85□□□□□ -1.15
LRMDA-210ENST00000593817 CHGAP10645 457 aaKnown RBP7.85□□□□□ -1.15
LRMDA-210ENST00000593817 TBX22Q9Y458 520 aa7.85□□□□□ -1.15
LRMDA-210ENST00000593817 PPLO60437 1756 aa7.84□□□□□ -1.15
LRMDA-210ENST00000593817 ASXL1Q8IXJ9 1541 aa7.84□□□□□ -1.15
LRMDA-210ENST00000593817 PPP1R15AO75807 674 aaPredicted RBP7.84□□□□□ -1.15
LRMDA-210ENST00000593817 PPARGC1BQ86YN6 1023 aaKnown RBP7.84□□□□□ -1.15
LRMDA-210ENST00000593817 ROCK1Q13464 1354 aa7.84□□□□□ -1.16
LRMDA-210ENST00000593817 MST1RQ04912 1400 aa7.83□□□□□ -1.16
LRMDA-210ENST00000593817 NCOA3Q9Y6Q9 1424 aa7.83□□□□□ -1.16
LRMDA-210ENST00000593817 NUP155O75694 1391 aa7.83□□□□□ -1.16
LRMDA-210ENST00000593817 METP08581 1390 aa7.83□□□□□ -1.16
LRMDA-210ENST00000593817 EP400Q96L91 3159 aa7.82□□□□□ -1.16
LRMDA-210ENST00000593817 LAMC1P11047 1609 aa7.82□□□□□ -1.16
LRMDA-210ENST00000593817 DDX17Q92841 729 aaKnown RBP7.82□□□□□ -1.16
LRMDA-210ENST00000593817 AMOTL2Q9Y2J4 779 aa7.82□□□□□ -1.16
LRMDA-210ENST00000593817 MARF1Q9Y4F3 1742 aaKnown RBP7.82□□□□□ -1.16
LRMDA-210ENST00000593817 PIK3R4Q99570 1358 aa7.82□□□□□ -1.16
LRMDA-210ENST00000593817 SRCAPQ6ZRS2 3230 aa7.81□□□□□ -1.16
LRMDA-210ENST00000593817 ITGAEP38570 1179 aa7.81□□□□□ -1.16
LRMDA-210ENST00000593817 BRINP3Q76B58 766 aa7.81□□□□□ -1.16
LRMDA-210ENST00000593817 RGPD8O14715 1765 aaPredicted RBP7.81□□□□□ -1.16
LRMDA-210ENST00000593817 C14orf37Q86TY3 774 aa7.8□□□□□ -1.16
LRMDA-210ENST00000593817 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.8□□□□□ -1.16
LRMDA-210ENST00000593817 TRIM52Q96A61 297 aa7.8□□□□□ -1.16
LRMDA-210ENST00000593817 C19orf44Q9H6X5 657 aa7.8□□□□□ -1.16
LRMDA-210ENST00000593817 IFT172Q9UG01 1749 aa7.8□□□□□ -1.16
LRMDA-210ENST00000593817 SPATA31A6Q5VVP1 1343 aa7.79□□□□□ -1.16
LRMDA-210ENST00000593817 DCCP43146 1447 aa7.79□□□□□ -1.16
LRMDA-210ENST00000593817 UPF1Q92900 1129 aaKnown RBP eCLIP7.79□□□□□ -1.16
LRMDA-210ENST00000593817 SETD5Q9C0A6 1442 aa7.78□□□□□ -1.16
LRMDA-210ENST00000593817 ADGRL3Q9HAR2 1447 aa7.78□□□□□ -1.16
LRMDA-210ENST00000593817 NUTM2BA6NNL0 878 aaPredicted RBP7.78□□□□□ -1.16
LRMDA-210ENST00000593817 NUTM2EB1AL46 878 aaPredicted RBP7.78□□□□□ -1.16
LRMDA-210ENST00000593817 ATF3P18847 181 aa7.78□□□□□ -1.16
LRMDA-210ENST00000593817 HDGFP51858 240 aaKnown RBP7.78□□□□□ -1.16
LRMDA-210ENST00000593817 CADPS2Q86UW7 1296 aa7.78□□□□□ -1.16
LRMDA-210ENST00000593817 NUTM2AQ8IVF1 878 aaPredicted RBP7.78□□□□□ -1.16
LRMDA-210ENST00000593817 COL22A1Q8NFW1 1626 aaPredicted RBP7.78□□□□□ -1.16
LRMDA-210ENST00000593817 RGS12O14924 1447 aa7.78□□□□□ -1.16
LRMDA-210ENST00000593817 PNPLA6Q8IY17 1366 aa7.77□□□□□ -1.17
LRMDA-210ENST00000593817 MEX3CQ5U5Q3 659 aaKnown RBP7.77□□□□□ -1.17
LRMDA-210ENST00000593817 BRWD3Q6RI45 1802 aa7.77□□□□□ -1.17
LRMDA-210ENST00000593817 NAIPQ13075 1403 aa7.77□□□□□ -1.17
LRMDA-210ENST00000593817 AFF2P51816 1311 aa7.77□□□□□ -1.17
LRMDA-210ENST00000593817 ROBO2Q9HCK4 1378 aa7.76□□□□□ -1.17
LRMDA-210ENST00000593817 C1orf167Q5SNV9 1468 aa7.75□□□□□ -1.17
LRMDA-210ENST00000593817 CDK12Q9NYV4 1490 aaPredicted RBP7.75□□□□□ -1.17
LRMDA-210ENST00000593817 ZNF326Q5BKZ1 582 aaKnown RBP7.75□□□□□ -1.17
LRMDA-210ENST00000593817 ZNF772Q68DY9 489 aaPredicted RBP7.75□□□□□ -1.17
LRMDA-210ENST00000593817 RRBP1Q9P2E9 1410 aaKnown RBP7.75□□□□□ -1.17
LRMDA-210ENST00000593817 KNDC1Q76NI1 1749 aa7.75□□□□□ -1.17
LRMDA-210ENST00000593817 PTCH1Q13635 1447 aa7.74□□□□□ -1.17
LRMDA-210ENST00000593817 ABCA3Q99758 1704 aa7.73□□□□□ -1.17
LRMDA-210ENST00000593817 FMN2Q9NZ56 1722 aa7.73□□□□□ -1.17
LRMDA-210ENST00000593817 RXRBP28702 533 aa7.73□□□□□ -1.17
LRMDA-210ENST00000593817 C8orf37Q96NL8 207 aa7.73□□□□□ -1.17
LRMDA-210ENST00000593817 ORAI2Q96SN7 254 aa7.73□□□□□ -1.17
LRMDA-210ENST00000593817 CDC42BPGQ6DT37 1551 aa7.72□□□□□ -1.17
LRMDA-210ENST00000593817 PRAG1Q86YV5 1406 aa7.72□□□□□ -1.17
LRMDA-210ENST00000593817 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms