RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 RIMS2Q9UQ26 1411 aa19.82■□□□□ 0.76
PRKCSH-218ENST00000593053 DISP3Q9P2K9 1392 aa19.82■□□□□ 0.76
PRKCSH-218ENST00000593053 HDGFP51858 240 aaKnown RBP19.81■□□□□ 0.76
PRKCSH-218ENST00000593053 TMEM131LA2VDJ0 1609 aa19.8■□□□□ 0.76
PRKCSH-218ENST00000593053 KCNA6P17658 529 aa19.8■□□□□ 0.76
PRKCSH-218ENST00000593053 HSPA1LP34931 641 aa19.8■□□□□ 0.76
PRKCSH-218ENST00000593053 PLEKHG1Q9ULL1 1385 aa19.79■□□□□ 0.76
PRKCSH-218ENST00000593053 ALKQ9UM73 1620 aa19.79■□□□□ 0.76
PRKCSH-218ENST00000593053 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.78■□□□□ 0.76
PRKCSH-218ENST00000593053 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
PRKCSH-218ENST00000593053 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
PRKCSH-218ENST00000593053 TMEM94Q12767 1356 aa19.75■□□□□ 0.75
PRKCSH-218ENST00000593053 PROSER2Q86WR7 435 aaPredicted RBP19.74■□□□□ 0.75
PRKCSH-218ENST00000593053 TRIM52Q96A61 297 aa19.74■□□□□ 0.75
PRKCSH-218ENST00000593053 RBM33Q96EV2 1170 aaKnown RBP19.74■□□□□ 0.75
PRKCSH-218ENST00000593053 MYO5BQ9ULV0 1848 aa19.73■□□□□ 0.75
PRKCSH-218ENST00000593053 TBX22Q9Y458 520 aa19.72■□□□□ 0.75
PRKCSH-218ENST00000593053 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
PRKCSH-218ENST00000593053 NWD1Q149M9 1564 aa19.7■□□□□ 0.74
PRKCSH-218ENST00000593053 ZNF326Q5BKZ1 582 aaKnown RBP19.69■□□□□ 0.74
PRKCSH-218ENST00000593053 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
PRKCSH-218ENST00000593053 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
PRKCSH-218ENST00000593053 ILDR2Q71H61 639 aa19.67■□□□□ 0.74
PRKCSH-218ENST00000593053 XIRP1Q702N8 1843 aaKnown RBP19.67■□□□□ 0.74
PRKCSH-218ENST00000593053 SLC4A1APQ9BWU0 796 aaKnown RBP19.66■□□□□ 0.74
PRKCSH-218ENST00000593053 TRPM2O94759 1503 aa19.66■□□□□ 0.74
PRKCSH-218ENST00000593053 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
PRKCSH-218ENST00000593053 MSH6P52701 1360 aa19.63■□□□□ 0.73
PRKCSH-218ENST00000593053 DIP2AQ14689 1571 aa19.62■□□□□ 0.73
PRKCSH-218ENST00000593053 PIK3R4Q99570 1358 aa19.62■□□□□ 0.73
PRKCSH-218ENST00000593053 FAM135BQ49AJ0 1406 aa19.61■□□□□ 0.73
PRKCSH-218ENST00000593053 C14orf37Q86TY3 774 aa19.59■□□□□ 0.73
PRKCSH-218ENST00000593053 AMOTL2Q9Y2J4 779 aa19.59■□□□□ 0.73
PRKCSH-218ENST00000593053 CHD2O14647 1828 aaKnown RBP19.59■□□□□ 0.73
PRKCSH-218ENST00000593053 FOXD1Q16676 465 aa19.58■□□□□ 0.72
PRKCSH-218ENST00000593053 PTPRUQ92729 1446 aa19.58■□□□□ 0.72
PRKCSH-218ENST00000593053 MED1Q15648 1581 aaPredicted RBP19.57■□□□□ 0.72
PRKCSH-218ENST00000593053 NCOA3Q9Y6Q9 1424 aa19.57■□□□□ 0.72
PRKCSH-218ENST00000593053 SETBP1Q9Y6X0 1596 aa19.57■□□□□ 0.72
PRKCSH-218ENST00000593053 NEXMIFQ5QGS0 1516 aa19.56■□□□□ 0.72
PRKCSH-218ENST00000593053 SLAIN2Q9P270 581 aa19.56■□□□□ 0.72
PRKCSH-218ENST00000593053 METP08581 1390 aa19.55■□□□□ 0.72
PRKCSH-218ENST00000593053 NRXN3Q9Y4C0 1643 aa19.54■□□□□ 0.72
PRKCSH-218ENST00000593053 MPHOSPH9Q99550 1183 aa19.54■□□□□ 0.72
PRKCSH-218ENST00000593053 C19orf44Q9H6X5 657 aa19.52■□□□□ 0.72
PRKCSH-218ENST00000593053 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.71
PRKCSH-218ENST00000593053 VGFO15240 615 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-218ENST00000593053 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
PRKCSH-218ENST00000593053 RPGRIP1LQ68CZ1 1315 aa19.51■□□□□ 0.71
PRKCSH-218ENST00000593053 ATF3P18847 181 aa19.5■□□□□ 0.71
PRKCSH-218ENST00000593053 CADPS2Q86UW7 1296 aa19.5■□□□□ 0.71
PRKCSH-218ENST00000593053 KIF1BO60333 1816 aa19.5■□□□□ 0.71
PRKCSH-218ENST00000593053 SETD5Q9C0A6 1442 aa19.5■□□□□ 0.71
PRKCSH-218ENST00000593053 SOCS7O14512 581 aa19.49■□□□□ 0.71
PRKCSH-218ENST00000593053 CCDC144AA2RUR9 1427 aa19.49■□□□□ 0.71
PRKCSH-218ENST00000593053 XRN1Q8IZH2 1706 aaKnown RBP19.47■□□□□ 0.71
PRKCSH-218ENST00000593053 ACIN1Q9UKV3 1341 aaKnown RBP19.46■□□□□ 0.71
PRKCSH-218ENST00000593053 RGL3Q3MIN7 710 aa19.45■□□□□ 0.7
PRKCSH-218ENST00000593053 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
PRKCSH-218ENST00000593053 RAB3GAP2Q9H2M9 1393 aa19.44■□□□□ 0.7
PRKCSH-218ENST00000593053 DCCP43146 1447 aa19.42■□□□□ 0.7
PRKCSH-218ENST00000593053 SPATA31E1Q6ZUB1 1445 aa19.42■□□□□ 0.7
PRKCSH-218ENST00000593053 ADGRF5Q8IZF2 1346 aa19.41■□□□□ 0.7
PRKCSH-218ENST00000593053 BRINP3Q76B58 766 aa19.4■□□□□ 0.7
PRKCSH-218ENST00000593053 ADGRL3Q9HAR2 1447 aa19.4■□□□□ 0.7
PRKCSH-218ENST00000593053 JCADQ9P266 1359 aa19.39■□□□□ 0.69
PRKCSH-218ENST00000593053 PHLPP1O60346 1717 aa19.39■□□□□ 0.69
PRKCSH-218ENST00000593053 PPLO60437 1756 aa19.38■□□□□ 0.69
PRKCSH-218ENST00000593053 PTCH1Q13635 1447 aa19.38■□□□□ 0.69
PRKCSH-218ENST00000593053 ANKRD30BQ9BXX2 1392 aa19.38■□□□□ 0.69
PRKCSH-218ENST00000593053 ROBO2Q9HCK4 1378 aa19.38■□□□□ 0.69
PRKCSH-218ENST00000593053 MST1RQ04912 1400 aa19.37■□□□□ 0.69
PRKCSH-218ENST00000593053 RGS17Q9UGC6 210 aaPredicted RBP19.36■□□□□ 0.69
PRKCSH-218ENST00000593053 SETD1AO15047 1707 aaKnown RBP19.36■□□□□ 0.69
PRKCSH-218ENST00000593053 COL16A1Q07092 1604 aaPredicted RBP19.35■□□□□ 0.69
PRKCSH-218ENST00000593053 AHDC1Q5TGY3 1603 aaPredicted RBP19.34■□□□□ 0.69
PRKCSH-218ENST00000593053 PRAG1Q86YV5 1406 aa19.34■□□□□ 0.69
PRKCSH-218ENST00000593053 ASXL1Q8IXJ9 1541 aa19.33■□□□□ 0.68
PRKCSH-218ENST00000593053 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
PRKCSH-218ENST00000593053 STK26Q9P289 416 aa19.31■□□□□ 0.68
PRKCSH-218ENST00000593053 TMEM132EQ6IEE7 984 aa19.3■□□□□ 0.68
PRKCSH-218ENST00000593053 PIK3C2GO75747 1445 aa19.3■□□□□ 0.68
PRKCSH-218ENST00000593053 C1orf167Q5SNV9 1468 aa19.29■□□□□ 0.68
PRKCSH-218ENST00000593053 SPATA31A6Q5VVP1 1343 aa19.29■□□□□ 0.68
PRKCSH-218ENST00000593053 DDX17Q92841 729 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-218ENST00000593053 LRPPRCP42704 1394 aaKnown RBP19.28■□□□□ 0.68
PRKCSH-218ENST00000593053 HRCP23327 699 aa19.27■□□□□ 0.68
PRKCSH-218ENST00000593053 POTEAQ6S8J7 498 aa19.27■□□□□ 0.68
PRKCSH-218ENST00000593053 IFT172Q9UG01 1749 aa19.27■□□□□ 0.68
PRKCSH-218ENST00000593053 WAPLQ7Z5K2 1190 aa19.26■□□□□ 0.67
PRKCSH-218ENST00000593053 TECPR2O15040 1411 aa19.25■□□□□ 0.67
PRKCSH-218ENST00000593053 LRP6O75581 1613 aa19.25■□□□□ 0.67
PRKCSH-218ENST00000593053 ABCC11Q96J66 1382 aa19.25■□□□□ 0.67
PRKCSH-218ENST00000593053 MEX3CQ5U5Q3 659 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-218ENST00000593053 ORAI2Q96SN7 254 aa19.25■□□□□ 0.67
PRKCSH-218ENST00000593053 C14orf93Q9H972 538 aaKnown RBP19.25■□□□□ 0.67
PRKCSH-218ENST00000593053 LRRC59Q96AG4 307 aaKnown RBP19.24■□□□□ 0.67
PRKCSH-218ENST00000593053 MYOM2P54296 1465 aa19.23■□□□□ 0.67
PRKCSH-218ENST00000593053 NUTM2BA6NNL0 878 aaPredicted RBP19.23■□□□□ 0.67
PRKCSH-218ENST00000593053 NUTM2EB1AL46 878 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms