RNA–Protein interactions for RNA: ENST00000592314.5

SF3A2-206, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 5

Gene SF3A2, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-206ENST00000592314 ZFYVE9O95405 1425 aa23.25■■□□□ 1.31
SF3A2-206ENST00000592314 TMEM131LA2VDJ0 1609 aa23.23■■□□□ 1.31
SF3A2-206ENST00000592314 RPRD2Q5VT52 1461 aaKnown RBP23.22■■□□□ 1.31
SF3A2-206ENST00000592314 PHLPP1O60346 1717 aa23.22■■□□□ 1.31
SF3A2-206ENST00000592314 POTEAQ6S8J7 498 aa23.21■■□□□ 1.31
SF3A2-206ENST00000592314 PROSER2Q86WR7 435 aaPredicted RBP23.21■■□□□ 1.31
SF3A2-206ENST00000592314 SETD1AO15047 1707 aaKnown RBP23.21■■□□□ 1.31
SF3A2-206ENST00000592314 UNC13BO14795 1591 aa23.19■■□□□ 1.3
SF3A2-206ENST00000592314 ANKRD50Q9ULJ7 1429 aa23.18■■□□□ 1.3
SF3A2-206ENST00000592314 APLP2Q06481 763 aa23.18■■□□□ 1.3
SF3A2-206ENST00000592314 E9PCH4 1651 aa23.18■■□□□ 1.3
SF3A2-206ENST00000592314 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
SF3A2-206ENST00000592314 COL16A1Q07092 1604 aaPredicted RBP23.17■■□□□ 1.3
SF3A2-206ENST00000592314 PLEKHG1Q9ULL1 1385 aa23.16■■□□□ 1.3
SF3A2-206ENST00000592314 RIMS2Q9UQ26 1411 aa23.16■■□□□ 1.3
SF3A2-206ENST00000592314 MSH6P52701 1360 aa23.14■■□□□ 1.29
SF3A2-206ENST00000592314 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.11■■□□□ 1.29
SF3A2-206ENST00000592314 ADAMTS13Q76LX8 1427 aa23.1■■□□□ 1.29
SF3A2-206ENST00000592314 FAM50AQ14320 339 aaKnown RBP23.1■■□□□ 1.29
SF3A2-206ENST00000592314 IQGAP3Q86VI3 1631 aa23.1■■□□□ 1.29
SF3A2-206ENST00000592314 LRP6O75581 1613 aa23.09■■□□□ 1.29
SF3A2-206ENST00000592314 BCANQ96GW7 911 aa23.09■■□□□ 1.29
SF3A2-206ENST00000592314 SLAIN2Q9P270 581 aa23.09■■□□□ 1.29
SF3A2-206ENST00000592314 DIP2AQ14689 1571 aa23.07■■□□□ 1.28
SF3A2-206ENST00000592314 JCADQ9P266 1359 aa23.06■■□□□ 1.28
SF3A2-206ENST00000592314 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
SF3A2-206ENST00000592314 PPP1R15AO75807 674 aaPredicted RBP23.04■■□□□ 1.28
SF3A2-206ENST00000592314 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
SF3A2-206ENST00000592314 NUTM2DQ5VT03 806 aaPredicted RBP23.03■■□□□ 1.28
SF3A2-206ENST00000592314 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
SF3A2-206ENST00000592314 TBX22Q9Y458 520 aa23.02■■□□□ 1.28
SF3A2-206ENST00000592314 PTPRUQ92729 1446 aa23.01■■□□□ 1.27
SF3A2-206ENST00000592314 NCOA3Q9Y6Q9 1424 aa23.01■■□□□ 1.27
SF3A2-206ENST00000592314 XRN1Q8IZH2 1706 aaKnown RBP22.99■■□□□ 1.27
SF3A2-206ENST00000592314 TRPM2O94759 1503 aa22.98■■□□□ 1.27
SF3A2-206ENST00000592314 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
SF3A2-206ENST00000592314 ROCK1Q13464 1354 aa22.96■■□□□ 1.27
SF3A2-206ENST00000592314 SPHKAPQ2M3C7 1700 aa22.95■■□□□ 1.26
SF3A2-206ENST00000592314 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.95■■□□□ 1.26
SF3A2-206ENST00000592314 PIK3R4Q99570 1358 aa22.95■■□□□ 1.26
SF3A2-206ENST00000592314 HDGFP51858 240 aaKnown RBP22.93■■□□□ 1.26
SF3A2-206ENST00000592314 SETBP1Q9Y6X0 1596 aa22.93■■□□□ 1.26
SF3A2-206ENST00000592314 C14orf37Q86TY3 774 aa22.92■■□□□ 1.26
SF3A2-206ENST00000592314 NHSL1Q5SYE7 1610 aa22.92■■□□□ 1.26
SF3A2-206ENST00000592314 SPATA31A6Q5VVP1 1343 aa22.9■■□□□ 1.26
SF3A2-206ENST00000592314 CADPS2Q86UW7 1296 aa22.9■■□□□ 1.26
SF3A2-206ENST00000592314 C19orf44Q9H6X5 657 aa22.9■■□□□ 1.26
SF3A2-206ENST00000592314 ASXL1Q8IXJ9 1541 aa22.9■■□□□ 1.26
SF3A2-206ENST00000592314 NUP155O75694 1391 aa22.89■■□□□ 1.26
SF3A2-206ENST00000592314 BRINP3Q76B58 766 aa22.89■■□□□ 1.25
SF3A2-206ENST00000592314 NALCNQ8IZF0 1738 aa22.88■■□□□ 1.25
SF3A2-206ENST00000592314 AMOTL2Q9Y2J4 779 aa22.88■■□□□ 1.25
SF3A2-206ENST00000592314 DCCP43146 1447 aa22.87■■□□□ 1.25
SF3A2-206ENST00000592314 MST1RQ04912 1400 aa22.86■■□□□ 1.25
SF3A2-206ENST00000592314 ATF3P18847 181 aa22.86■■□□□ 1.25
SF3A2-206ENST00000592314 CLTCL1P53675 1640 aa22.86■■□□□ 1.25
SF3A2-206ENST00000592314 NEXMIFQ5QGS0 1516 aa22.84■■□□□ 1.25
SF3A2-206ENST00000592314 MEX3CQ5U5Q3 659 aaKnown RBP22.83■■□□□ 1.25
SF3A2-206ENST00000592314 METP08581 1390 aa22.83■■□□□ 1.25
SF3A2-206ENST00000592314 TRIM52Q96A61 297 aa22.81■■□□□ 1.24
SF3A2-206ENST00000592314 SETD5Q9C0A6 1442 aa22.81■■□□□ 1.24
SF3A2-206ENST00000592314 ITGAEP38570 1179 aa22.8■■□□□ 1.24
SF3A2-206ENST00000592314 ZNF772Q68DY9 489 aaPredicted RBP22.8■■□□□ 1.24
SF3A2-206ENST00000592314 UPF1Q92900 1129 aaKnown RBP eCLIP22.8■■□□□ 1.24
SF3A2-206ENST00000592314 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
SF3A2-206ENST00000592314 ADGRL3Q9HAR2 1447 aa22.79■■□□□ 1.24
SF3A2-206ENST00000592314 NUTM2BA6NNL0 878 aaPredicted RBP22.77■■□□□ 1.24
SF3A2-206ENST00000592314 NUTM2EB1AL46 878 aaPredicted RBP22.77■■□□□ 1.24
SF3A2-206ENST00000592314 NUTM2AQ8IVF1 878 aaPredicted RBP22.77■■□□□ 1.24
SF3A2-206ENST00000592314 DDX17Q92841 729 aaKnown RBP22.76■■□□□ 1.23
SF3A2-206ENST00000592314 KIF1BO60333 1816 aa22.75■■□□□ 1.23
SF3A2-206ENST00000592314 CDK12Q9NYV4 1490 aaPredicted RBP22.75■■□□□ 1.23
SF3A2-206ENST00000592314 AFF2P51816 1311 aa22.74■■□□□ 1.23
SF3A2-206ENST00000592314 LAMC1P11047 1609 aa22.74■■□□□ 1.23
SF3A2-206ENST00000592314 PPARGC1BQ86YN6 1023 aaKnown RBP22.73■■□□□ 1.23
SF3A2-206ENST00000592314 PNPLA6Q8IY17 1366 aa22.73■■□□□ 1.23
SF3A2-206ENST00000592314 ZNF326Q5BKZ1 582 aaKnown RBP22.72■■□□□ 1.23
SF3A2-206ENST00000592314 RXRBP28702 533 aa22.71■■□□□ 1.23
SF3A2-206ENST00000592314 RGS12O14924 1447 aa22.71■■□□□ 1.23
SF3A2-206ENST00000592314 EP400Q96L91 3159 aa22.69■■□□□ 1.22
SF3A2-206ENST00000592314 C1orf167Q5SNV9 1468 aa22.68■■□□□ 1.22
SF3A2-206ENST00000592314 PTCH1Q13635 1447 aa22.66■■□□□ 1.22
SF3A2-206ENST00000592314 NAIPQ13075 1403 aa22.65■■□□□ 1.22
SF3A2-206ENST00000592314 ROBO2Q9HCK4 1378 aa22.65■■□□□ 1.22
SF3A2-206ENST00000592314 PPLO60437 1756 aa22.64■■□□□ 1.22
SF3A2-206ENST00000592314 LRRC59Q96AG4 307 aaKnown RBP22.64■■□□□ 1.21
SF3A2-206ENST00000592314 C8orf37Q96NL8 207 aa22.64■■□□□ 1.21
SF3A2-206ENST00000592314 PRAG1Q86YV5 1406 aa22.63■■□□□ 1.21
SF3A2-206ENST00000592314 RRBP1Q9P2E9 1410 aaKnown RBP22.61■■□□□ 1.21
SF3A2-206ENST00000592314 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
SF3A2-206ENST00000592314 ORAI2Q96SN7 254 aa22.59■■□□□ 1.21
SF3A2-206ENST00000592314 QTRT2Q9H974 415 aaKnown RBP22.58■■□□□ 1.21
SF3A2-206ENST00000592314 SOS2Q07890 1332 aaPredicted RBP22.57■■□□□ 1.2
SF3A2-206ENST00000592314 ADAMTS2O95450 1211 aa22.56■■□□□ 1.2
SF3A2-206ENST00000592314 RBM6P78332 1123 aaKnown RBP22.56■■□□□ 1.2
SF3A2-206ENST00000592314 CDC42BPGQ6DT37 1551 aa22.55■■□□□ 1.2
SF3A2-206ENST00000592314 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
SF3A2-206ENST00000592314 MYOM2P54296 1465 aa22.52■■□□□ 1.2
SF3A2-206ENST00000592314 HFM1A2PYH4 1435 aa22.51■■□□□ 1.19
SF3A2-206ENST00000592314 NGLY1Q96IV0 654 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms