RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 SLC52A1Q9NWF4 448 aa24.85■■□□□ 1.57
DDX39A-216ENST00000591275 MSH6P52701 1360 aa24.84■■□□□ 1.57
DDX39A-216ENST00000591275 MYO5BQ9ULV0 1848 aa24.82■■□□□ 1.56
DDX39A-216ENST00000591275 SLAIN2Q9P270 581 aa24.81■■□□□ 1.56
DDX39A-216ENST00000591275 ADGRL2O95490 1459 aa24.8■■□□□ 1.56
DDX39A-216ENST00000591275 PHLPP1O60346 1717 aa24.79■■□□□ 1.56
DDX39A-216ENST00000591275 PPP1R15AO75807 674 aaPredicted RBP24.79■■□□□ 1.56
DDX39A-216ENST00000591275 FAM50AQ14320 339 aaKnown RBP24.79■■□□□ 1.56
DDX39A-216ENST00000591275 ZFYVE9O95405 1425 aa24.78■■□□□ 1.56
DDX39A-216ENST00000591275 GCC2Q8IWJ2 1684 aa24.78■■□□□ 1.56
DDX39A-216ENST00000591275 RIMS2Q9UQ26 1411 aa24.78■■□□□ 1.56
DDX39A-216ENST00000591275 PLEKHG1Q9ULL1 1385 aa24.77■■□□□ 1.56
DDX39A-216ENST00000591275 CHD2O14647 1828 aaKnown RBP24.77■■□□□ 1.56
DDX39A-216ENST00000591275 ANKRD50Q9ULJ7 1429 aa24.77■■□□□ 1.56
DDX39A-216ENST00000591275 RPRD2Q5VT52 1461 aaKnown RBP24.77■■□□□ 1.56
DDX39A-216ENST00000591275 SETD1AO15047 1707 aaKnown RBP24.73■■□□□ 1.55
DDX39A-216ENST00000591275 TMEM131LA2VDJ0 1609 aa24.73■■□□□ 1.55
DDX39A-216ENST00000591275 JCADQ9P266 1359 aa24.73■■□□□ 1.55
DDX39A-216ENST00000591275 CHGAP10645 457 aaKnown RBP24.73■■□□□ 1.55
DDX39A-216ENST00000591275 HDGFP51858 240 aaKnown RBP24.71■■□□□ 1.55
DDX39A-216ENST00000591275 NUTM2DQ5VT03 806 aaPredicted RBP24.71■■□□□ 1.55
DDX39A-216ENST00000591275 C14orf37Q86TY3 774 aa24.7■■□□□ 1.54
DDX39A-216ENST00000591275 COL16A1Q07092 1604 aaPredicted RBP24.69■■□□□ 1.54
DDX39A-216ENST00000591275 TBX22Q9Y458 520 aa24.69■■□□□ 1.54
DDX39A-216ENST00000591275 ADAMTS13Q76LX8 1427 aa24.65■■□□□ 1.54
DDX39A-216ENST00000591275 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.65■■□□□ 1.54
DDX39A-216ENST00000591275 UNC13BO14795 1591 aa24.64■■□□□ 1.54
DDX39A-216ENST00000591275 LRP6O75581 1613 aa24.64■■□□□ 1.53
DDX39A-216ENST00000591275 E9PCH4 1651 aa24.63■■□□□ 1.53
DDX39A-216ENST00000591275 NCOA3Q9Y6Q9 1424 aa24.63■■□□□ 1.53
DDX39A-216ENST00000591275 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.63■■□□□ 1.53
DDX39A-216ENST00000591275 MEX3CQ5U5Q3 659 aaKnown RBP24.62■■□□□ 1.53
DDX39A-216ENST00000591275 ATF3P18847 181 aa24.61■■□□□ 1.53
DDX39A-216ENST00000591275 CADPS2Q86UW7 1296 aa24.6■■□□□ 1.53
DDX39A-216ENST00000591275 SPATA31A6Q5VVP1 1343 aa24.6■■□□□ 1.53
DDX39A-216ENST00000591275 DIP2AQ14689 1571 aa24.59■■□□□ 1.53
DDX39A-216ENST00000591275 C19orf44Q9H6X5 657 aa24.59■■□□□ 1.53
DDX39A-216ENST00000591275 AHDC1Q5TGY3 1603 aaPredicted RBP24.57■■□□□ 1.52
DDX39A-216ENST00000591275 PIK3R4Q99570 1358 aa24.56■■□□□ 1.52
DDX39A-216ENST00000591275 AMOTL2Q9Y2J4 779 aa24.56■■□□□ 1.52
DDX39A-216ENST00000591275 IQGAP3Q86VI3 1631 aa24.55■■□□□ 1.52
DDX39A-216ENST00000591275 TRIM52Q96A61 297 aa24.55■■□□□ 1.52
DDX39A-216ENST00000591275 TRPM2O94759 1503 aa24.55■■□□□ 1.52
DDX39A-216ENST00000591275 PTPRUQ92729 1446 aa24.54■■□□□ 1.52
DDX39A-216ENST00000591275 SHPRHQ149N8 1683 aa24.54■■□□□ 1.52
DDX39A-216ENST00000591275 ZNF772Q68DY9 489 aaPredicted RBP24.54■■□□□ 1.52
DDX39A-216ENST00000591275 BRINP3Q76B58 766 aa24.52■■□□□ 1.52
DDX39A-216ENST00000591275 NUP155O75694 1391 aa24.52■■□□□ 1.52
DDX39A-216ENST00000591275 NUTM2BA6NNL0 878 aaPredicted RBP24.51■■□□□ 1.51
DDX39A-216ENST00000591275 NUTM2EB1AL46 878 aaPredicted RBP24.51■■□□□ 1.51
DDX39A-216ENST00000591275 NUTM2AQ8IVF1 878 aaPredicted RBP24.51■■□□□ 1.51
DDX39A-216ENST00000591275 ROCK1Q13464 1354 aa24.51■■□□□ 1.51
DDX39A-216ENST00000591275 UPF1Q92900 1129 aaKnown RBP eCLIP24.49■■□□□ 1.51
DDX39A-216ENST00000591275 ITGAEP38570 1179 aa24.48■■□□□ 1.51
DDX39A-216ENST00000591275 RXRBP28702 533 aa24.45■■□□□ 1.5
DDX39A-216ENST00000591275 NRXN3Q9Y4C0 1643 aa24.45■■□□□ 1.5
DDX39A-216ENST00000591275 ASXL1Q8IXJ9 1541 aa24.45■■□□□ 1.5
DDX39A-216ENST00000591275 DCCP43146 1447 aa24.44■■□□□ 1.5
DDX39A-216ENST00000591275 XRN1Q8IZH2 1706 aaKnown RBP24.44■■□□□ 1.5
DDX39A-216ENST00000591275 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
DDX39A-216ENST00000591275 MST1RQ04912 1400 aa24.42■■□□□ 1.5
DDX39A-216ENST00000591275 SETBP1Q9Y6X0 1596 aa24.42■■□□□ 1.5
DDX39A-216ENST00000591275 AFF2P51816 1311 aa24.41■■□□□ 1.5
DDX39A-216ENST00000591275 METP08581 1390 aa24.41■■□□□ 1.5
DDX39A-216ENST00000591275 SPHKAPQ2M3C7 1700 aa24.4■■□□□ 1.5
DDX39A-216ENST00000591275 SETD5Q9C0A6 1442 aa24.39■■□□□ 1.5
DDX39A-216ENST00000591275 DDX17Q92841 729 aaKnown RBP24.39■■□□□ 1.49
DDX39A-216ENST00000591275 NHSL1Q5SYE7 1610 aa24.39■■□□□ 1.49
DDX39A-216ENST00000591275 LRRC59Q96AG4 307 aaKnown RBP24.36■■□□□ 1.49
DDX39A-216ENST00000591275 CDK12Q9NYV4 1490 aaPredicted RBP24.35■■□□□ 1.49
DDX39A-216ENST00000591275 PPARGC1BQ86YN6 1023 aaKnown RBP24.34■■□□□ 1.49
DDX39A-216ENST00000591275 C8orf37Q96NL8 207 aa24.34■■□□□ 1.49
DDX39A-216ENST00000591275 ADGRL3Q9HAR2 1447 aa24.34■■□□□ 1.49
DDX39A-216ENST00000591275 NALCNQ8IZF0 1738 aa24.32■■□□□ 1.48
DDX39A-216ENST00000591275 PNPLA6Q8IY17 1366 aa24.31■■□□□ 1.48
DDX39A-216ENST00000591275 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
DDX39A-216ENST00000591275 CLTCL1P53675 1640 aa24.3■■□□□ 1.48
DDX39A-216ENST00000591275 NEXMIFQ5QGS0 1516 aa24.3■■□□□ 1.48
DDX39A-216ENST00000591275 RGS12O14924 1447 aa24.28■■□□□ 1.48
DDX39A-216ENST00000591275 ADAMTS2O95450 1211 aa24.26■■□□□ 1.47
DDX39A-216ENST00000591275 RBM6P78332 1123 aaKnown RBP24.26■■□□□ 1.47
DDX39A-216ENST00000591275 C1orf167Q5SNV9 1468 aa24.26■■□□□ 1.47
DDX39A-216ENST00000591275 NGLY1Q96IV0 654 aa24.24■■□□□ 1.47
DDX39A-216ENST00000591275 KIF1BO60333 1816 aa24.23■■□□□ 1.47
DDX39A-216ENST00000591275 SRCAPQ6ZRS2 3230 aa24.22■■□□□ 1.47
DDX39A-216ENST00000591275 ORAI2Q96SN7 254 aa24.21■■□□□ 1.47
DDX39A-216ENST00000591275 ROBO2Q9HCK4 1378 aa24.2■■□□□ 1.46
DDX39A-216ENST00000591275 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
DDX39A-216ENST00000591275 LAMC1P11047 1609 aa24.17■■□□□ 1.46
DDX39A-216ENST00000591275 SOS2Q07890 1332 aaPredicted RBP24.16■■□□□ 1.46
DDX39A-216ENST00000591275 VGFO15240 615 aaPredicted RBP24.15■■□□□ 1.46
DDX39A-216ENST00000591275 USP21Q9UK80 565 aa24.15■■□□□ 1.46
DDX39A-216ENST00000591275 NAIPQ13075 1403 aa24.13■■□□□ 1.45
DDX39A-216ENST00000591275 TRPC5Q9UL62 973 aaPredicted RBP24.1■■□□□ 1.45
DDX39A-216ENST00000591275 ATAD2Q6PL18 1390 aa24.1■■□□□ 1.45
DDX39A-216ENST00000591275 FNBP4Q8N3X1 1017 aaPredicted RBP24.08■■□□□ 1.45
DDX39A-216ENST00000591275 HFM1A2PYH4 1435 aa24.08■■□□□ 1.44
DDX39A-216ENST00000591275 EP400Q96L91 3159 aa24.07■■□□□ 1.44
DDX39A-216ENST00000591275 PRAG1Q86YV5 1406 aa24.07■■□□□ 1.44
DDX39A-216ENST00000591275 RPGRIP1LQ68CZ1 1315 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms