RNA–Protein interactions for RNA: ENST00000590454.2

R3HDM4-206, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,006 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-206ENST00000590454 UNC13BO14795 1591 aa32.2■■■□□ 2.75
R3HDM4-206ENST00000590454 KDM5AP29375 1690 aaKnown RBP32.18■■■□□ 2.74
R3HDM4-206ENST00000590454 RBM33Q96EV2 1170 aaKnown RBP32.16■■■□□ 2.74
R3HDM4-206ENST00000590454 TET3O43151 1660 aa32.15■■■□□ 2.74
R3HDM4-206ENST00000590454 LMTK2Q8IWU2 1503 aa32.15■■■□□ 2.74
R3HDM4-206ENST00000590454 TRIM26Q12899 539 aaPredicted RBP32.14■■■□□ 2.74
R3HDM4-206ENST00000590454 SETD5Q9C0A6 1442 aa32.13■■■□□ 2.73
R3HDM4-206ENST00000590454 ROBO1Q9Y6N7 1651 aa32.13■■■□□ 2.73
R3HDM4-206ENST00000590454 BCANQ96GW7 911 aa32.11■■■□□ 2.73
R3HDM4-206ENST00000590454 NUP155O75694 1391 aa32.1■■■□□ 2.73
R3HDM4-206ENST00000590454 SLC52A1Q9NWF4 448 aa32.1■■■□□ 2.73
R3HDM4-206ENST00000590454 NKTRP30414 1462 aaKnown RBP32.1■■■□□ 2.73
R3HDM4-206ENST00000590454 MSH6P52701 1360 aa32.09■■■□□ 2.73
R3HDM4-206ENST00000590454 NOS1P29475 1434 aa32.09■■■□□ 2.73
R3HDM4-206ENST00000590454 SLAIN2Q9P270 581 aa32.08■■■□□ 2.73
R3HDM4-206ENST00000590454 IQGAP3Q86VI3 1631 aa32.07■■■□□ 2.72
R3HDM4-206ENST00000590454 RAB3GAP2Q9H2M9 1393 aa32.07■■■□□ 2.72
R3HDM4-206ENST00000590454 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
R3HDM4-206ENST00000590454 NWD1Q149M9 1564 aa32.04■■■□□ 2.72
R3HDM4-206ENST00000590454 TRIM52Q96A61 297 aa32.03■■■□□ 2.72
R3HDM4-206ENST00000590454 JCADQ9P266 1359 aa32.02■■■□□ 2.72
R3HDM4-206ENST00000590454 HDGFP51858 240 aaKnown RBP32■■■□□ 2.71
R3HDM4-206ENST00000590454 PLEKHG1Q9ULL1 1385 aa31.96■■■□□ 2.71
R3HDM4-206ENST00000590454 PPP1R15AO75807 674 aaPredicted RBP31.95■■■□□ 2.71
R3HDM4-206ENST00000590454 PHLPP1O60346 1717 aa31.95■■■□□ 2.7
R3HDM4-206ENST00000590454 E9PCH4 1651 aa31.94■■■□□ 2.7
R3HDM4-206ENST00000590454 RPRD2Q5VT52 1461 aaKnown RBP31.93■■■□□ 2.7
R3HDM4-206ENST00000590454 ZFYVE9O95405 1425 aa31.92■■■□□ 2.7
R3HDM4-206ENST00000590454 TBX22Q9Y458 520 aa31.91■■■□□ 2.7
R3HDM4-206ENST00000590454 NCOA3Q9Y6Q9 1424 aa31.91■■■□□ 2.7
R3HDM4-206ENST00000590454 RIMS2Q9UQ26 1411 aa31.9■■■□□ 2.7
R3HDM4-206ENST00000590454 SPATA31A6Q5VVP1 1343 aa31.87■■■□□ 2.69
R3HDM4-206ENST00000590454 C14orf37Q86TY3 774 aa31.87■■■□□ 2.69
R3HDM4-206ENST00000590454 SLC4A1APQ9BWU0 796 aaKnown RBP31.87■■■□□ 2.69
R3HDM4-206ENST00000590454 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.86■■■□□ 2.69
R3HDM4-206ENST00000590454 CHD2O14647 1828 aaKnown RBP31.86■■■□□ 2.69
R3HDM4-206ENST00000590454 HRCP23327 699 aa31.85■■■□□ 2.69
R3HDM4-206ENST00000590454 MEX3CQ5U5Q3 659 aaKnown RBP31.84■■■□□ 2.69
R3HDM4-206ENST00000590454 ZNF772Q68DY9 489 aaPredicted RBP31.84■■■□□ 2.69
R3HDM4-206ENST00000590454 COL16A1Q07092 1604 aaPredicted RBP31.83■■■□□ 2.69
R3HDM4-206ENST00000590454 CADPS2Q86UW7 1296 aa31.83■■■□□ 2.69
R3HDM4-206ENST00000590454 MPHOSPH9Q99550 1183 aa31.83■■■□□ 2.69
R3HDM4-206ENST00000590454 PCGF6Q9BYE7 350 aa31.83■■■□□ 2.69
R3HDM4-206ENST00000590454 SETD1AO15047 1707 aaKnown RBP31.83■■■□□ 2.69
R3HDM4-206ENST00000590454 CHGAP10645 457 aaKnown RBP31.81■■■□□ 2.68
R3HDM4-206ENST00000590454 FOXD1Q16676 465 aa31.81■■■□□ 2.68
R3HDM4-206ENST00000590454 C19orf44Q9H6X5 657 aa31.81■■■□□ 2.68
R3HDM4-206ENST00000590454 TMEM131LA2VDJ0 1609 aa31.79■■■□□ 2.68
R3HDM4-206ENST00000590454 ATF3P18847 181 aa31.79■■■□□ 2.68
R3HDM4-206ENST00000590454 LRP6O75581 1613 aa31.78■■■□□ 2.68
R3HDM4-206ENST00000590454 UPF1Q92900 1129 aaKnown RBP eCLIP31.76■■■□□ 2.671e-14■□□□□ 9.2
R3HDM4-206ENST00000590454 PIK3R4Q99570 1358 aa31.76■■■□□ 2.67
R3HDM4-206ENST00000590454 ACIN1Q9UKV3 1341 aaKnown RBP31.75■■■□□ 2.67
R3HDM4-206ENST00000590454 MYO5BQ9ULV0 1848 aa31.75■■■□□ 2.67
R3HDM4-206ENST00000590454 ADAMTS13Q76LX8 1427 aa31.75■■■□□ 2.67
R3HDM4-206ENST00000590454 NUTM2DQ5VT03 806 aaPredicted RBP31.74■■■□□ 2.67
R3HDM4-206ENST00000590454 SPHKAPQ2M3C7 1700 aa31.72■■■□□ 2.67
R3HDM4-206ENST00000590454 AHDC1Q5TGY3 1603 aaPredicted RBP31.72■■■□□ 2.67
R3HDM4-206ENST00000590454 DIP2AQ14689 1571 aa31.7■■■□□ 2.67
R3HDM4-206ENST00000590454 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.69■■■□□ 2.66
R3HDM4-206ENST00000590454 RXRBP28702 533 aa31.68■■■□□ 2.66
R3HDM4-206ENST00000590454 AMOTL2Q9Y2J4 779 aa31.68■■■□□ 2.66
R3HDM4-206ENST00000590454 BRINP3Q76B58 766 aa31.66■■■□□ 2.66
R3HDM4-206ENST00000590454 SHPRHQ149N8 1683 aa31.66■■■□□ 2.66
R3HDM4-206ENST00000590454 TRPM2O94759 1503 aa31.64■■■□□ 2.66
R3HDM4-206ENST00000590454 NUTM2BA6NNL0 878 aaPredicted RBP31.63■■■□□ 2.65
R3HDM4-206ENST00000590454 NUTM2EB1AL46 878 aaPredicted RBP31.63■■■□□ 2.65
R3HDM4-206ENST00000590454 NUTM2AQ8IVF1 878 aaPredicted RBP31.63■■■□□ 2.65
R3HDM4-206ENST00000590454 CLTCL1P53675 1640 aa31.62■■■□□ 2.65
R3HDM4-206ENST00000590454 PTPRUQ92729 1446 aa31.59■■■□□ 2.65
R3HDM4-206ENST00000590454 DCCP43146 1447 aa31.58■■■□□ 2.65
R3HDM4-206ENST00000590454 CDK12Q9NYV4 1490 aaPredicted RBP31.57■■■□□ 2.64
R3HDM4-206ENST00000590454 AFF2P51816 1311 aa31.55■■■□□ 2.64
R3HDM4-206ENST00000590454 LRRC59Q96AG4 307 aaKnown RBP31.53■■■□□ 2.64
R3HDM4-206ENST00000590454 ANKRD30BQ9BXX2 1392 aa31.53■■■□□ 2.64
R3HDM4-206ENST00000590454 ASXL1Q8IXJ9 1541 aa31.52■■■□□ 2.64
R3HDM4-206ENST00000590454 DHX57Q6P158 1386 aaKnown RBP31.52■■■□□ 2.64
R3HDM4-206ENST00000590454 MST1RQ04912 1400 aa31.49■■■□□ 2.63
R3HDM4-206ENST00000590454 CCDC144AA2RUR9 1427 aa31.47■■■□□ 2.63
R3HDM4-206ENST00000590454 KIF1BO60333 1816 aa31.45■■■□□ 2.62
R3HDM4-206ENST00000590454 C8orf37Q96NL8 207 aa31.44■■■□□ 2.62
R3HDM4-206ENST00000590454 QTRT2Q9H974 415 aaKnown RBP31.44■■■□□ 2.62
R3HDM4-206ENST00000590454 XRN1Q8IZH2 1706 aaKnown RBP31.44■■■□□ 2.62
R3HDM4-206ENST00000590454 SETBP1Q9Y6X0 1596 aa31.43■■■□□ 2.62
R3HDM4-206ENST00000590454 RBM6P78332 1123 aaKnown RBP31.43■■■□□ 2.62
R3HDM4-206ENST00000590454 ZNF326Q5BKZ1 582 aaKnown RBP31.43■■■□□ 2.62
R3HDM4-206ENST00000590454 METP08581 1390 aa31.42■■■□□ 2.62
R3HDM4-206ENST00000590454 NHSL1Q5SYE7 1610 aa31.41■■■□□ 2.62
R3HDM4-206ENST00000590454 NRXN3Q9Y4C0 1643 aa31.4■■■□□ 2.62
R3HDM4-206ENST00000590454 DDX17Q92841 729 aaKnown RBP31.39■■■□□ 2.62
R3HDM4-206ENST00000590454 PNPLA6Q8IY17 1366 aa31.39■■■□□ 2.62
R3HDM4-206ENST00000590454 RGS12O14924 1447 aa31.37■■■□□ 2.61
R3HDM4-206ENST00000590454 SPATA31E1Q6ZUB1 1445 aa31.37■■■□□ 2.61
R3HDM4-206ENST00000590454 ADGRL3Q9HAR2 1447 aa31.37■■■□□ 2.61
R3HDM4-206ENST00000590454 NGLY1Q96IV0 654 aa31.34■■■□□ 2.61
R3HDM4-206ENST00000590454 RGL3Q3MIN7 710 aa31.33■■■□□ 2.61
R3HDM4-206ENST00000590454 NEXMIFQ5QGS0 1516 aa31.3■■■□□ 2.6
R3HDM4-206ENST00000590454 ADAMTS2O95450 1211 aa31.3■■■□□ 2.6
R3HDM4-206ENST00000590454 SIN3AQ96ST3 1273 aa31.3■■■□□ 2.6
R3HDM4-206ENST00000590454 C1orf167Q5SNV9 1468 aa31.27■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms