RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
RAB3D-202ENST00000589655 PROSER2Q86WR7 435 aaPredicted RBP25.12■■□□□ 1.61
RAB3D-202ENST00000589655 RGS17Q9UGC6 210 aaPredicted RBP25.12■■□□□ 1.61
RAB3D-202ENST00000589655 NKTRP30414 1462 aaKnown RBP25.11■■□□□ 1.61
RAB3D-202ENST00000589655 GCC2Q8IWJ2 1684 aa25.1■■□□□ 1.61
RAB3D-202ENST00000589655 UNC13BO14795 1591 aa25.1■■□□□ 1.61
RAB3D-202ENST00000589655 TMEM131LA2VDJ0 1609 aa25.09■■□□□ 1.61
RAB3D-202ENST00000589655 ROBO1Q9Y6N7 1651 aa25.09■■□□□ 1.61
RAB3D-202ENST00000589655 RIMS2Q9UQ26 1411 aa25.07■■□□□ 1.6
RAB3D-202ENST00000589655 PLEKHG1Q9ULL1 1385 aa25.06■■□□□ 1.6
RAB3D-202ENST00000589655 E9PCH4 1651 aa25.05■■□□□ 1.6
RAB3D-202ENST00000589655 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
RAB3D-202ENST00000589655 BCANQ96GW7 911 aa25.04■■□□□ 1.6
RAB3D-202ENST00000589655 ROCK1Q13464 1354 aa25.01■■□□□ 1.59
RAB3D-202ENST00000589655 MSH6P52701 1360 aa25■■□□□ 1.59
RAB3D-202ENST00000589655 IQGAP3Q86VI3 1631 aa24.99■■□□□ 1.59
RAB3D-202ENST00000589655 ADAMTS13Q76LX8 1427 aa24.98■■□□□ 1.59
RAB3D-202ENST00000589655 PPP1R15AO75807 674 aaPredicted RBP24.98■■□□□ 1.59
RAB3D-202ENST00000589655 SLAIN2Q9P270 581 aa24.97■■□□□ 1.59
RAB3D-202ENST00000589655 TBX22Q9Y458 520 aa24.97■■□□□ 1.59
RAB3D-202ENST00000589655 CHGAP10645 457 aaKnown RBP24.95■■□□□ 1.58
RAB3D-202ENST00000589655 HDGFP51858 240 aaKnown RBP24.95■■□□□ 1.58
RAB3D-202ENST00000589655 NUTM2DQ5VT03 806 aaPredicted RBP24.95■■□□□ 1.58
RAB3D-202ENST00000589655 POTEAQ6S8J7 498 aa24.94■■□□□ 1.58
RAB3D-202ENST00000589655 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.92■■□□□ 1.58
RAB3D-202ENST00000589655 PHLPP1O60346 1717 aa24.92■■□□□ 1.58
RAB3D-202ENST00000589655 NUP155O75694 1391 aa24.91■■□□□ 1.58
RAB3D-202ENST00000589655 NCOA3Q9Y6Q9 1424 aa24.9■■□□□ 1.58
RAB3D-202ENST00000589655 DIP2AQ14689 1571 aa24.89■■□□□ 1.58
RAB3D-202ENST00000589655 COL16A1Q07092 1604 aaPredicted RBP24.88■■□□□ 1.57
RAB3D-202ENST00000589655 ITGAEP38570 1179 aa24.87■■□□□ 1.57
RAB3D-202ENST00000589655 PIK3R4Q99570 1358 aa24.87■■□□□ 1.57
RAB3D-202ENST00000589655 PTPRUQ92729 1446 aa24.86■■□□□ 1.57
RAB3D-202ENST00000589655 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.86■■□□□ 1.57
RAB3D-202ENST00000589655 JCADQ9P266 1359 aa24.85■■□□□ 1.57
RAB3D-202ENST00000589655 PPARGC1BQ86YN6 1023 aaKnown RBP24.84■■□□□ 1.57
RAB3D-202ENST00000589655 NRXN3Q9Y4C0 1643 aa24.83■■□□□ 1.56
RAB3D-202ENST00000589655 TRPM2O94759 1503 aa24.82■■□□□ 1.56
RAB3D-202ENST00000589655 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
RAB3D-202ENST00000589655 C19orf44Q9H6X5 657 aa24.81■■□□□ 1.56
RAB3D-202ENST00000589655 AMOTL2Q9Y2J4 779 aa24.8■■□□□ 1.56
RAB3D-202ENST00000589655 SPHKAPQ2M3C7 1700 aa24.8■■□□□ 1.56
RAB3D-202ENST00000589655 LRP6O75581 1613 aa24.79■■□□□ 1.56
RAB3D-202ENST00000589655 CADPS2Q86UW7 1296 aa24.79■■□□□ 1.56
RAB3D-202ENST00000589655 AHDC1Q5TGY3 1603 aaPredicted RBP24.79■■□□□ 1.56
RAB3D-202ENST00000589655 XRN1Q8IZH2 1706 aaKnown RBP24.78■■□□□ 1.56
RAB3D-202ENST00000589655 SETBP1Q9Y6X0 1596 aa24.77■■□□□ 1.56
RAB3D-202ENST00000589655 ATF3P18847 181 aa24.75■■□□□ 1.55
RAB3D-202ENST00000589655 SETD1AO15047 1707 aaKnown RBP24.74■■□□□ 1.55
RAB3D-202ENST00000589655 BRINP3Q76B58 766 aa24.73■■□□□ 1.55
RAB3D-202ENST00000589655 METP08581 1390 aa24.72■■□□□ 1.55
RAB3D-202ENST00000589655 SPATA31A6Q5VVP1 1343 aa24.72■■□□□ 1.55
RAB3D-202ENST00000589655 SHPRHQ149N8 1683 aa24.72■■□□□ 1.55
RAB3D-202ENST00000589655 CLTCL1P53675 1640 aa24.72■■□□□ 1.55
RAB3D-202ENST00000589655 DCCP43146 1447 aa24.7■■□□□ 1.55
RAB3D-202ENST00000589655 NEXMIFQ5QGS0 1516 aa24.69■■□□□ 1.54
RAB3D-202ENST00000589655 ZNF326Q5BKZ1 582 aaKnown RBP24.68■■□□□ 1.54
RAB3D-202ENST00000589655 MST1RQ04912 1400 aa24.68■■□□□ 1.54
RAB3D-202ENST00000589655 RRBP1Q9P2E9 1410 aaKnown RBP24.67■■□□□ 1.54
RAB3D-202ENST00000589655 ASXL1Q8IXJ9 1541 aa24.66■■□□□ 1.54
RAB3D-202ENST00000589655 NAIPQ13075 1403 aa24.66■■□□□ 1.54
RAB3D-202ENST00000589655 NHSL1Q5SYE7 1610 aa24.63■■□□□ 1.53
RAB3D-202ENST00000589655 ADGRL3Q9HAR2 1447 aa24.61■■□□□ 1.53
RAB3D-202ENST00000589655 NALCNQ8IZF0 1738 aa24.61■■□□□ 1.53
RAB3D-202ENST00000589655 MEX3CQ5U5Q3 659 aaKnown RBP24.61■■□□□ 1.53
RAB3D-202ENST00000589655 SETD5Q9C0A6 1442 aa24.61■■□□□ 1.53
RAB3D-202ENST00000589655 KIF1BO60333 1816 aa24.59■■□□□ 1.53
RAB3D-202ENST00000589655 ZNF772Q68DY9 489 aaPredicted RBP24.59■■□□□ 1.53
RAB3D-202ENST00000589655 NUTM2BA6NNL0 878 aaPredicted RBP24.57■■□□□ 1.52
RAB3D-202ENST00000589655 NUTM2EB1AL46 878 aaPredicted RBP24.57■■□□□ 1.52
RAB3D-202ENST00000589655 NUTM2AQ8IVF1 878 aaPredicted RBP24.57■■□□□ 1.52
RAB3D-202ENST00000589655 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
RAB3D-202ENST00000589655 TRIM52Q96A61 297 aa24.54■■□□□ 1.52
RAB3D-202ENST00000589655 HFM1A2PYH4 1435 aa24.52■■□□□ 1.52
RAB3D-202ENST00000589655 ROBO2Q9HCK4 1378 aa24.52■■□□□ 1.52
RAB3D-202ENST00000589655 PTCH1Q13635 1447 aa24.52■■□□□ 1.52
RAB3D-202ENST00000589655 LRRC59Q96AG4 307 aaKnown RBP24.51■■□□□ 1.51
RAB3D-202ENST00000589655 PNPLA6Q8IY17 1366 aa24.51■■□□□ 1.51
RAB3D-202ENST00000589655 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
RAB3D-202ENST00000589655 UPF1Q92900 1129 aaKnown RBP eCLIP24.5■■□□□ 1.51
RAB3D-202ENST00000589655 AFF2P51816 1311 aa24.5■■□□□ 1.51
RAB3D-202ENST00000589655 PRAG1Q86YV5 1406 aa24.49■■□□□ 1.51
RAB3D-202ENST00000589655 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
RAB3D-202ENST00000589655 LAMC1P11047 1609 aa24.48■■□□□ 1.51
RAB3D-202ENST00000589655 RXRBP28702 533 aa24.48■■□□□ 1.51
RAB3D-202ENST00000589655 PPLO60437 1756 aa24.47■■□□□ 1.51
RAB3D-202ENST00000589655 CDK12Q9NYV4 1490 aaPredicted RBP24.46■■□□□ 1.51
RAB3D-202ENST00000589655 SLC4A1APQ9BWU0 796 aaKnown RBP24.45■■□□□ 1.5
RAB3D-202ENST00000589655 RPGRIP1LQ68CZ1 1315 aa24.44■■□□□ 1.5
RAB3D-202ENST00000589655 ORAI2Q96SN7 254 aa24.44■■□□□ 1.5
RAB3D-202ENST00000589655 C8orf37Q96NL8 207 aa24.42■■□□□ 1.5
RAB3D-202ENST00000589655 SOS2Q07890 1332 aaPredicted RBP24.41■■□□□ 1.5
RAB3D-202ENST00000589655 FOXD1Q16676 465 aa24.4■■□□□ 1.5
RAB3D-202ENST00000589655 RGS12O14924 1447 aa24.38■■□□□ 1.49
RAB3D-202ENST00000589655 QTRT2Q9H974 415 aaKnown RBP24.37■■□□□ 1.49
RAB3D-202ENST00000589655 ADAMTS2O95450 1211 aa24.36■■□□□ 1.49
RAB3D-202ENST00000589655 ADGRF5Q8IZF2 1346 aa24.35■■□□□ 1.49
RAB3D-202ENST00000589655 RBM6P78332 1123 aaKnown RBP24.34■■□□□ 1.49
RAB3D-202ENST00000589655 SPATA31E1Q6ZUB1 1445 aa24.34■■□□□ 1.49
RAB3D-202ENST00000589655 CDC42BPGQ6DT37 1551 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms