RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ADGRB3O60242 1522 aa21.77■■□□□ 1.08
ERCC1-205ENST00000587888 PPP1R15AO75807 674 aaPredicted RBP21.76■■□□□ 1.07
ERCC1-205ENST00000587888 HDGFP51858 240 aaKnown RBP21.76■■□□□ 1.07
ERCC1-205ENST00000587888 RPRD2Q5VT52 1461 aaKnown RBP21.76■■□□□ 1.07
ERCC1-205ENST00000587888 NUTM2DQ5VT03 806 aaPredicted RBP21.72■■□□□ 1.07
ERCC1-205ENST00000587888 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
ERCC1-205ENST00000587888 RIMS2Q9UQ26 1411 aa21.72■■□□□ 1.07
ERCC1-205ENST00000587888 MYO5BQ9ULV0 1848 aa21.71■■□□□ 1.07
ERCC1-205ENST00000587888 ROCK1Q13464 1354 aa21.68■■□□□ 1.06
ERCC1-205ENST00000587888 PLEKHG1Q9ULL1 1385 aa21.68■■□□□ 1.06
ERCC1-205ENST00000587888 ZFYVE9O95405 1425 aa21.68■■□□□ 1.06
ERCC1-205ENST00000587888 GCC2Q8IWJ2 1684 aa21.68■■□□□ 1.06
ERCC1-205ENST00000587888 TMEM131LA2VDJ0 1609 aa21.67■■□□□ 1.06
ERCC1-205ENST00000587888 UNC13BO14795 1591 aa21.67■■□□□ 1.06
ERCC1-205ENST00000587888 NUP155O75694 1391 aa21.67■■□□□ 1.06
ERCC1-205ENST00000587888 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.67■■□□□ 1.06
ERCC1-205ENST00000587888 MSH6P52701 1360 aa21.66■■□□□ 1.06
ERCC1-205ENST00000587888 SLAIN2Q9P270 581 aa21.66■■□□□ 1.06
ERCC1-205ENST00000587888 TBX22Q9Y458 520 aa21.66■■□□□ 1.06
ERCC1-205ENST00000587888 RGS17Q9UGC6 210 aaPredicted RBP21.65■■□□□ 1.06
ERCC1-205ENST00000587888 E9PCH4 1651 aa21.65■■□□□ 1.06
ERCC1-205ENST00000587888 NKTRP30414 1462 aaKnown RBP21.64■■□□□ 1.06
ERCC1-205ENST00000587888 ROBO1Q9Y6N7 1651 aa21.63■■□□□ 1.05
ERCC1-205ENST00000587888 NWD1Q149M9 1564 aa21.63■■□□□ 1.05
ERCC1-205ENST00000587888 C14orf37Q86TY3 774 aa21.63■■□□□ 1.05
ERCC1-205ENST00000587888 CHD2O14647 1828 aaKnown RBP21.62■■□□□ 1.05
ERCC1-205ENST00000587888 IQGAP3Q86VI3 1631 aa21.59■■□□□ 1.05
ERCC1-205ENST00000587888 ADAMTS13Q76LX8 1427 aa21.56■■□□□ 1.04
ERCC1-205ENST00000587888 AMOTL2Q9Y2J4 779 aa21.55■■□□□ 1.04
ERCC1-205ENST00000587888 ZNF326Q5BKZ1 582 aaKnown RBP21.54■■□□□ 1.04
ERCC1-205ENST00000587888 ATF3P18847 181 aa21.53■■□□□ 1.04
ERCC1-205ENST00000587888 POTEAQ6S8J7 498 aa21.53■■□□□ 1.04
ERCC1-205ENST00000587888 C19orf44Q9H6X5 657 aa21.53■■□□□ 1.04
ERCC1-205ENST00000587888 PHLPP1O60346 1717 aa21.52■■□□□ 1.03
ERCC1-205ENST00000587888 CADPS2Q86UW7 1296 aa21.51■■□□□ 1.03
ERCC1-205ENST00000587888 NCOA3Q9Y6Q9 1424 aa21.51■■□□□ 1.03
ERCC1-205ENST00000587888 PIK3R4Q99570 1358 aa21.49■■□□□ 1.03
ERCC1-205ENST00000587888 JCADQ9P266 1359 aa21.48■■□□□ 1.03
ERCC1-205ENST00000587888 DIP2AQ14689 1571 aa21.48■■□□□ 1.03
ERCC1-205ENST00000587888 PTPRUQ92729 1446 aa21.47■■□□□ 1.03
ERCC1-205ENST00000587888 TRPM2O94759 1503 aa21.47■■□□□ 1.03
ERCC1-205ENST00000587888 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
ERCC1-205ENST00000587888 SPHKAPQ2M3C7 1700 aa21.44■■□□□ 1.02
ERCC1-205ENST00000587888 TRIM52Q96A61 297 aa21.43■■□□□ 1.02
ERCC1-205ENST00000587888 METP08581 1390 aa21.41■■□□□ 1.02
ERCC1-205ENST00000587888 MEX3CQ5U5Q3 659 aaKnown RBP21.41■■□□□ 1.02
ERCC1-205ENST00000587888 COL16A1Q07092 1604 aaPredicted RBP21.4■■□□□ 1.02
ERCC1-205ENST00000587888 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
ERCC1-205ENST00000587888 RRBP1Q9P2E9 1410 aaKnown RBP21.39■■□□□ 1.02
ERCC1-205ENST00000587888 NRXN3Q9Y4C0 1643 aa21.39■■□□□ 1.01
ERCC1-205ENST00000587888 NAIPQ13075 1403 aa21.38■■□□□ 1.01
ERCC1-205ENST00000587888 SPATA31A6Q5VVP1 1343 aa21.38■■□□□ 1.01
ERCC1-205ENST00000587888 SETBP1Q9Y6X0 1596 aa21.37■■□□□ 1.01
ERCC1-205ENST00000587888 CLTCL1P53675 1640 aa21.37■■□□□ 1.01
ERCC1-205ENST00000587888 NUTM2BA6NNL0 878 aaPredicted RBP21.36■■□□□ 1.01
ERCC1-205ENST00000587888 NUTM2EB1AL46 878 aaPredicted RBP21.36■■□□□ 1.01
ERCC1-205ENST00000587888 NUTM2AQ8IVF1 878 aaPredicted RBP21.36■■□□□ 1.01
ERCC1-205ENST00000587888 LRP6O75581 1613 aa21.34■■□□□ 1.01
ERCC1-205ENST00000587888 AHDC1Q5TGY3 1603 aaPredicted RBP21.33■■□□□ 1.01
ERCC1-205ENST00000587888 XRN1Q8IZH2 1706 aaKnown RBP21.33■■□□□ 1.01
ERCC1-205ENST00000587888 NEXMIFQ5QGS0 1516 aa21.33■■□□□ 1
ERCC1-205ENST00000587888 KIF1BO60333 1816 aa21.32■■□□□ 1
ERCC1-205ENST00000587888 VGFO15240 615 aaPredicted RBP21.32■■□□□ 1
ERCC1-205ENST00000587888 SLC4A1APQ9BWU0 796 aaKnown RBP21.32■■□□□ 1
ERCC1-205ENST00000587888 DCCP43146 1447 aa21.31■■□□□ 1
ERCC1-205ENST00000587888 ZNF772Q68DY9 489 aaPredicted RBP21.31■■□□□ 1
ERCC1-205ENST00000587888 DDX17Q92841 729 aaKnown RBP21.31■■□□□ 1
ERCC1-205ENST00000587888 MST1RQ04912 1400 aa21.3■■□□□ 1
ERCC1-205ENST00000587888 ASXL1Q8IXJ9 1541 aa21.29■■□□□ 1
ERCC1-205ENST00000587888 LRRC59Q96AG4 307 aaKnown RBP21.28■■□□□ 1
ERCC1-205ENST00000587888 SHPRHQ149N8 1683 aa21.28■■□□□ 1
ERCC1-205ENST00000587888 FOXD1Q16676 465 aa21.27■■□□□ 1
ERCC1-205ENST00000587888 HFM1A2PYH4 1435 aa21.27■■□□□ 1
ERCC1-205ENST00000587888 ADGRL3Q9HAR2 1447 aa21.26■□□□□ 0.99
ERCC1-205ENST00000587888 RPGRIP1LQ68CZ1 1315 aa21.26■□□□□ 0.99
ERCC1-205ENST00000587888 SETD1AO15047 1707 aaKnown RBP21.25■□□□□ 0.99
ERCC1-205ENST00000587888 SETD5Q9C0A6 1442 aa21.23■□□□□ 0.99
ERCC1-205ENST00000587888 RXRBP28702 533 aa21.23■□□□□ 0.99
ERCC1-205ENST00000587888 ROBO2Q9HCK4 1378 aa21.22■□□□□ 0.99
ERCC1-205ENST00000587888 NALCNQ8IZF0 1738 aa21.21■□□□□ 0.99
ERCC1-205ENST00000587888 ORAI2Q96SN7 254 aa21.21■□□□□ 0.99
ERCC1-205ENST00000587888 AFF2P51816 1311 aa21.21■□□□□ 0.99
ERCC1-205ENST00000587888 RGL3Q3MIN7 710 aa21.2■□□□□ 0.98
ERCC1-205ENST00000587888 C8orf37Q96NL8 207 aa21.2■□□□□ 0.98
ERCC1-205ENST00000587888 C1orf167Q5SNV9 1468 aa21.2■□□□□ 0.98
ERCC1-205ENST00000587888 NHSL1Q5SYE7 1610 aa21.19■□□□□ 0.98
ERCC1-205ENST00000587888 PNPLA6Q8IY17 1366 aa21.17■□□□□ 0.98
ERCC1-205ENST00000587888 PTCH1Q13635 1447 aa21.16■□□□□ 0.98
ERCC1-205ENST00000587888 ADAMTS2O95450 1211 aa21.16■□□□□ 0.98
ERCC1-205ENST00000587888 ADGRF5Q8IZF2 1346 aa21.15■□□□□ 0.98
ERCC1-205ENST00000587888 UPF1Q92900 1129 aaKnown RBP eCLIP21.15■□□□□ 0.98
ERCC1-205ENST00000587888 MPHOSPH9Q99550 1183 aa21.15■□□□□ 0.98
ERCC1-205ENST00000587888 QTRT2Q9H974 415 aaKnown RBP21.15■□□□□ 0.98
ERCC1-205ENST00000587888 STK26Q9P289 416 aa21.15■□□□□ 0.98
ERCC1-205ENST00000587888 PPLO60437 1756 aa21.15■□□□□ 0.98
ERCC1-205ENST00000587888 NGLY1Q96IV0 654 aa21.14■□□□□ 0.97
ERCC1-205ENST00000587888 CCDC144AA2RUR9 1427 aa21.12■□□□□ 0.97
ERCC1-205ENST00000587888 ESCO1Q5FWF5 840 aa21.11■□□□□ 0.97
ERCC1-205ENST00000587888 WAPLQ7Z5K2 1190 aa21.11■□□□□ 0.97
ERCC1-205ENST00000587888 SOS2Q07890 1332 aaPredicted RBP21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms