RNA–Protein interactions for RNA: ENST00000587834.5

SEC11C-204, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11C, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-204ENST00000587834 MED1Q15648 1581 aaPredicted RBP36.67■■■■□ 3.46
SEC11C-204ENST00000587834 SLC26A8Q96RN1 970 aa36.67■■■■□ 3.46
SEC11C-204ENST00000587834 RIMS2Q9UQ26 1411 aa36.65■■■■□ 3.46
SEC11C-204ENST00000587834 NUP155O75694 1391 aa36.65■■■■□ 3.46
SEC11C-204ENST00000587834 SENP3Q9H4L4 574 aaPredicted RBP36.61■■■■□ 3.45
SEC11C-204ENST00000587834 RRBP1Q9P2E9 1410 aaKnown RBP36.6■■■■□ 3.45
SEC11C-204ENST00000587834 NKTRP30414 1462 aaKnown RBP36.59■■■■□ 3.45
SEC11C-204ENST00000587834 PLEKHG1Q9ULL1 1385 aa36.59■■■■□ 3.45
SEC11C-204ENST00000587834 SPHKAPQ2M3C7 1700 aa36.59■■■■□ 3.45
SEC11C-204ENST00000587834 TMEM94Q12767 1356 aa36.58■■■■□ 3.45
SEC11C-204ENST00000587834 KCNA6P17658 529 aa36.58■■■■□ 3.45
SEC11C-204ENST00000587834 BCANQ96GW7 911 aa36.57■■■■□ 3.44
SEC11C-204ENST00000587834 CHD2O14647 1828 aaKnown RBP36.57■■■■□ 3.44
SEC11C-204ENST00000587834 CHGAP10645 457 aaKnown RBP36.55■■■■□ 3.44
SEC11C-204ENST00000587834 PPP1R15AO75807 674 aaPredicted RBP36.54■■■■□ 3.44
SEC11C-204ENST00000587834 RBM33Q96EV2 1170 aaKnown RBP36.5■■■■□ 3.43
SEC11C-204ENST00000587834 SOCS7O14512 581 aa36.48■■■■□ 3.43
SEC11C-204ENST00000587834 PROSER2Q86WR7 435 aaPredicted RBP36.48■■■■□ 3.43
SEC11C-204ENST00000587834 DIP2AQ14689 1571 aa36.46■■■■□ 3.43
SEC11C-204ENST00000587834 HDGFP51858 240 aaKnown RBP36.46■■■■□ 3.43
SEC11C-204ENST00000587834 NUTM2DQ5VT03 806 aaPredicted RBP36.45■■■■□ 3.43
SEC11C-204ENST00000587834 ROBO1Q9Y6N7 1651 aa36.45■■■■□ 3.42
SEC11C-204ENST00000587834 NAIPQ13075 1403 aa36.44■■■■□ 3.42
SEC11C-204ENST00000587834 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.44■■■■□ 3.42
SEC11C-204ENST00000587834 ADAMTS13Q76LX8 1427 aa36.43■■■■□ 3.42
SEC11C-204ENST00000587834 CLTCL1P53675 1640 aa36.39■■■■□ 3.42
SEC11C-204ENST00000587834 FAM135BQ49AJ0 1406 aa36.39■■■■□ 3.42
SEC11C-204ENST00000587834 TBX22Q9Y458 520 aa36.36■■■■□ 3.41
SEC11C-204ENST00000587834 NRXN3Q9Y4C0 1643 aa36.36■■■■□ 3.41
SEC11C-204ENST00000587834 MSH6P52701 1360 aa36.36■■■■□ 3.41
SEC11C-204ENST00000587834 TRPM2O94759 1503 aa36.34■■■■□ 3.41
SEC11C-204ENST00000587834 HFM1A2PYH4 1435 aa36.31■■■■□ 3.4
SEC11C-204ENST00000587834 KIF1BO60333 1816 aa36.29■■■■□ 3.4
SEC11C-204ENST00000587834 SETBP1Q9Y6X0 1596 aa36.29■■■■□ 3.4
SEC11C-204ENST00000587834 PIK3R4Q99570 1358 aa36.27■■■■□ 3.4
SEC11C-204ENST00000587834 PHF23Q9BUL5 403 aaPredicted RBP36.27■■■■□ 3.4
SEC11C-204ENST00000587834 NEXMIFQ5QGS0 1516 aa36.25■■■■□ 3.39
SEC11C-204ENST00000587834 XRN1Q8IZH2 1706 aaKnown RBP36.25■■■■□ 3.39
SEC11C-204ENST00000587834 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.25■■■■□ 3.39
SEC11C-204ENST00000587834 PTPRUQ92729 1446 aa36.25■■■■□ 3.39
SEC11C-204ENST00000587834 PHLPP1O60346 1717 aa36.23■■■■□ 3.39
SEC11C-204ENST00000587834 ZNF326Q5BKZ1 582 aaKnown RBP36.22■■■■□ 3.39
SEC11C-204ENST00000587834 NCOA3Q9Y6Q9 1424 aa36.22■■■■□ 3.39
SEC11C-204ENST00000587834 SLAIN2Q9P270 581 aa36.18■■■■□ 3.38
SEC11C-204ENST00000587834 C14orf37Q86TY3 774 aa36.17■■■■□ 3.38
SEC11C-204ENST00000587834 TRIM52Q96A61 297 aa36.16■■■■□ 3.38
SEC11C-204ENST00000587834 AMOTL2Q9Y2J4 779 aa36.14■■■■□ 3.38
SEC11C-204ENST00000587834 COL16A1Q07092 1604 aaPredicted RBP36.12■■■■□ 3.37
SEC11C-204ENST00000587834 METP08581 1390 aa36.1■■■■□ 3.37
SEC11C-204ENST00000587834 SLC4A1APQ9BWU0 796 aaKnown RBP36.07■■■■□ 3.36
SEC11C-204ENST00000587834 SETD1AO15047 1707 aaKnown RBP36.07■■■■□ 3.36
SEC11C-204ENST00000587834 C19orf44Q9H6X5 657 aa36.06■■■■□ 3.36
SEC11C-204ENST00000587834 PPLO60437 1756 aa36.04■■■■□ 3.36
SEC11C-204ENST00000587834 CADPS2Q86UW7 1296 aa36.04■■■■□ 3.36
SEC11C-204ENST00000587834 ATF3P18847 181 aa36.03■■■■□ 3.36
SEC11C-204ENST00000587834 RGS17Q9UGC6 210 aaPredicted RBP36.03■■■■□ 3.36
SEC11C-204ENST00000587834 AHDC1Q5TGY3 1603 aaPredicted RBP36.03■■■■□ 3.36
SEC11C-204ENST00000587834 NALCNQ8IZF0 1738 aa36.02■■■■□ 3.36
SEC11C-204ENST00000587834 DCCP43146 1447 aa36.01■■■■□ 3.36
SEC11C-204ENST00000587834 JCADQ9P266 1359 aa35.98■■■■□ 3.35
SEC11C-204ENST00000587834 FOXD1Q16676 465 aa35.95■■■■□ 3.35
SEC11C-204ENST00000587834 ADGRL3Q9HAR2 1447 aa35.92■■■■□ 3.34
SEC11C-204ENST00000587834 SHPRHQ149N8 1683 aa35.92■■■■□ 3.34
SEC11C-204ENST00000587834 ASXL1Q8IXJ9 1541 aa35.92■■■■□ 3.34
SEC11C-204ENST00000587834 MST1RQ04912 1400 aa35.91■■■■□ 3.34
SEC11C-204ENST00000587834 VGFO15240 615 aaPredicted RBP35.89■■■■□ 3.34
SEC11C-204ENST00000587834 BRINP3Q76B58 766 aa35.89■■■■□ 3.34
SEC11C-204ENST00000587834 NHSL1Q5SYE7 1610 aa35.89■■■■□ 3.34
SEC11C-204ENST00000587834 RPGRIP1LQ68CZ1 1315 aa35.87■■■■□ 3.33
SEC11C-204ENST00000587834 PTCH1Q13635 1447 aa35.87■■■■□ 3.33
SEC11C-204ENST00000587834 IFT172Q9UG01 1749 aa35.87■■■■□ 3.33
SEC11C-204ENST00000587834 LRP6O75581 1613 aa35.86■■■■□ 3.33
SEC11C-204ENST00000587834 CCDC144AA2RUR9 1427 aa35.85■■■■□ 3.33
SEC11C-204ENST00000587834 POTEAQ6S8J7 498 aa35.82■■■■□ 3.32
SEC11C-204ENST00000587834 ROBO2Q9HCK4 1378 aa35.81■■■■□ 3.32
SEC11C-204ENST00000587834 PRAG1Q86YV5 1406 aa35.81■■■■□ 3.32
SEC11C-204ENST00000587834 MPHOSPH9Q99550 1183 aa35.8■■■■□ 3.32
SEC11C-204ENST00000587834 SPATA31E1Q6ZUB1 1445 aa35.79■■■■□ 3.32
SEC11C-204ENST00000587834 SPATA31A6Q5VVP1 1343 aa35.78■■■■□ 3.32
SEC11C-204ENST00000587834 SETD5Q9C0A6 1442 aa35.72■■■■□ 3.31
SEC11C-204ENST00000587834 ADGRF5Q8IZF2 1346 aa35.71■■■■□ 3.31
SEC11C-204ENST00000587834 RGL3Q3MIN7 710 aa35.7■■■■□ 3.31
SEC11C-204ENST00000587834 C1orf167Q5SNV9 1468 aa35.7■■■■□ 3.31
SEC11C-204ENST00000587834 LAMC1P11047 1609 aa35.68■■■■□ 3.3
SEC11C-204ENST00000587834 MEX3CQ5U5Q3 659 aaKnown RBP35.67■■■■□ 3.3
SEC11C-204ENST00000587834 DDX17Q92841 729 aaKnown RBP35.67■■■■□ 3.3
SEC11C-204ENST00000587834 ANKRD30BQ9BXX2 1392 aa35.65■■■■□ 3.3
SEC11C-204ENST00000587834 KNDC1Q76NI1 1749 aa35.65■■■■□ 3.3
SEC11C-204ENST00000587834 CDC42BPGQ6DT37 1551 aa35.64■■■■□ 3.3
SEC11C-204ENST00000587834 PIK3C2GO75747 1445 aa35.63■■■■□ 3.29
SEC11C-204ENST00000587834 RAB3GAP2Q9H2M9 1393 aa35.61■■■■□ 3.29
SEC11C-204ENST00000587834 NUTM2BA6NNL0 878 aaPredicted RBP35.6■■■■□ 3.29
SEC11C-204ENST00000587834 NUTM2EB1AL46 878 aaPredicted RBP35.6■■■■□ 3.29
SEC11C-204ENST00000587834 NUTM2AQ8IVF1 878 aaPredicted RBP35.6■■■■□ 3.29
SEC11C-204ENST00000587834 TECPR2O15040 1411 aa35.59■■■■□ 3.29
SEC11C-204ENST00000587834 PNPLA6Q8IY17 1366 aa35.58■■■■□ 3.29
SEC11C-204ENST00000587834 ACIN1Q9UKV3 1341 aaKnown RBP35.57■■■■□ 3.28
SEC11C-204ENST00000587834 LRRC59Q96AG4 307 aaKnown RBP35.56■■■■□ 3.28
SEC11C-204ENST00000587834 ORAI2Q96SN7 254 aa35.55■■■■□ 3.28
SEC11C-204ENST00000587834 LRPPRCP42704 1394 aaKnown RBP35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms