RNA–Protein interactions for RNA: ENST00000587721.1

RDH13-209, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-209ENST00000587721 FAM135BQ49AJ0 1406 aa21.06■□□□□ 0.96
RDH13-209ENST00000587721 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.06■□□□□ 0.96
RDH13-209ENST00000587721 CHGAP10645 457 aaKnown RBP21.05■□□□□ 0.96
RDH13-209ENST00000587721 PLEKHG1Q9ULL1 1385 aa21.04■□□□□ 0.96
RDH13-209ENST00000587721 NKTRP30414 1462 aaKnown RBP21.04■□□□□ 0.96
RDH13-209ENST00000587721 RIMS2Q9UQ26 1411 aa21.03■□□□□ 0.96
RDH13-209ENST00000587721 MSH6P52701 1360 aa21.02■□□□□ 0.96
RDH13-209ENST00000587721 ZFYVE9O95405 1425 aa21.01■□□□□ 0.95
RDH13-209ENST00000587721 XIRP1Q702N8 1843 aaKnown RBP21.01■□□□□ 0.95
RDH13-209ENST00000587721 UNC13BO14795 1591 aa21.01■□□□□ 0.95
RDH13-209ENST00000587721 GCC2Q8IWJ2 1684 aa21■□□□□ 0.95
RDH13-209ENST00000587721 ITGAEP38570 1179 aa21■□□□□ 0.95
RDH13-209ENST00000587721 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
RDH13-209ENST00000587721 TBX22Q9Y458 520 aa21■□□□□ 0.95
RDH13-209ENST00000587721 NUP155O75694 1391 aa20.99■□□□□ 0.95
RDH13-209ENST00000587721 NWD1Q149M9 1564 aa20.98■□□□□ 0.95
RDH13-209ENST00000587721 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
RDH13-209ENST00000587721 SLAIN2Q9P270 581 aa20.96■□□□□ 0.95
RDH13-209ENST00000587721 C14orf37Q86TY3 774 aa20.95■□□□□ 0.94
RDH13-209ENST00000587721 IQGAP3Q86VI3 1631 aa20.94■□□□□ 0.94
RDH13-209ENST00000587721 NCOA3Q9Y6Q9 1424 aa20.93■□□□□ 0.94
RDH13-209ENST00000587721 E9PCH4 1651 aa20.93■□□□□ 0.94
RDH13-209ENST00000587721 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
RDH13-209ENST00000587721 PIK3R4Q99570 1358 aa20.92■□□□□ 0.94
RDH13-209ENST00000587721 ROBO1Q9Y6N7 1651 aa20.91■□□□□ 0.94
RDH13-209ENST00000587721 PPARGC1BQ86YN6 1023 aaKnown RBP20.9■□□□□ 0.94
RDH13-209ENST00000587721 MYO5BQ9ULV0 1848 aa20.9■□□□□ 0.94
RDH13-209ENST00000587721 DIP2AQ14689 1571 aa20.89■□□□□ 0.93
RDH13-209ENST00000587721 CHD2O14647 1828 aaKnown RBP20.88■□□□□ 0.93
RDH13-209ENST00000587721 CADPS2Q86UW7 1296 aa20.88■□□□□ 0.93
RDH13-209ENST00000587721 C19orf44Q9H6X5 657 aa20.88■□□□□ 0.93
RDH13-209ENST00000587721 ADAMTS13Q76LX8 1427 aa20.87■□□□□ 0.93
RDH13-209ENST00000587721 ATF3P18847 181 aa20.87■□□□□ 0.93
RDH13-209ENST00000587721 RGS17Q9UGC6 210 aaPredicted RBP20.86■□□□□ 0.93
RDH13-209ENST00000587721 ZNF326Q5BKZ1 582 aaKnown RBP20.85■□□□□ 0.93
RDH13-209ENST00000587721 JCADQ9P266 1359 aa20.85■□□□□ 0.93
RDH13-209ENST00000587721 AMOTL2Q9Y2J4 779 aa20.84■□□□□ 0.93
RDH13-209ENST00000587721 TRPM2O94759 1503 aa20.83■□□□□ 0.93
RDH13-209ENST00000587721 PHLPP1O60346 1717 aa20.79■□□□□ 0.92
RDH13-209ENST00000587721 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
RDH13-209ENST00000587721 RRBP1Q9P2E9 1410 aaKnown RBP20.77■□□□□ 0.91
RDH13-209ENST00000587721 SPATA31A6Q5VVP1 1343 aa20.77■□□□□ 0.91
RDH13-209ENST00000587721 SPHKAPQ2M3C7 1700 aa20.75■□□□□ 0.91
RDH13-209ENST00000587721 MEX3CQ5U5Q3 659 aaKnown RBP20.74■□□□□ 0.91
RDH13-209ENST00000587721 PTPRUQ92729 1446 aa20.74■□□□□ 0.91
RDH13-209ENST00000587721 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.73■□□□□ 0.91
RDH13-209ENST00000587721 SETBP1Q9Y6X0 1596 aa20.73■□□□□ 0.91
RDH13-209ENST00000587721 DCCP43146 1447 aa20.73■□□□□ 0.91
RDH13-209ENST00000587721 TRIM52Q96A61 297 aa20.73■□□□□ 0.91
RDH13-209ENST00000587721 NAIPQ13075 1403 aa20.72■□□□□ 0.91
RDH13-209ENST00000587721 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
RDH13-209ENST00000587721 BRINP3Q76B58 766 aa20.71■□□□□ 0.91
RDH13-209ENST00000587721 AHDC1Q5TGY3 1603 aaPredicted RBP20.69■□□□□ 0.9
RDH13-209ENST00000587721 VGFO15240 615 aaPredicted RBP20.69■□□□□ 0.9
RDH13-209ENST00000587721 ZNF772Q68DY9 489 aaPredicted RBP20.69■□□□□ 0.9
RDH13-209ENST00000587721 METP08581 1390 aa20.69■□□□□ 0.9
RDH13-209ENST00000587721 NRXN3Q9Y4C0 1643 aa20.67■□□□□ 0.9
RDH13-209ENST00000587721 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
RDH13-209ENST00000587721 CLTCL1P53675 1640 aa20.66■□□□□ 0.9
RDH13-209ENST00000587721 XRN1Q8IZH2 1706 aaKnown RBP20.66■□□□□ 0.9
RDH13-209ENST00000587721 NEXMIFQ5QGS0 1516 aa20.65■□□□□ 0.9
RDH13-209ENST00000587721 HFM1A2PYH4 1435 aa20.65■□□□□ 0.9
RDH13-209ENST00000587721 RPGRIP1LQ68CZ1 1315 aa20.65■□□□□ 0.9
RDH13-209ENST00000587721 LRRC59Q96AG4 307 aaKnown RBP20.64■□□□□ 0.89
RDH13-209ENST00000587721 ADGRL3Q9HAR2 1447 aa20.63■□□□□ 0.89
RDH13-209ENST00000587721 MST1RQ04912 1400 aa20.62■□□□□ 0.89
RDH13-209ENST00000587721 KIF1BO60333 1816 aa20.62■□□□□ 0.89
RDH13-209ENST00000587721 ASXL1Q8IXJ9 1541 aa20.62■□□□□ 0.89
RDH13-209ENST00000587721 LRP6O75581 1613 aa20.61■□□□□ 0.89
RDH13-209ENST00000587721 NUTM2BA6NNL0 878 aaPredicted RBP20.61■□□□□ 0.89
RDH13-209ENST00000587721 NUTM2EB1AL46 878 aaPredicted RBP20.61■□□□□ 0.89
RDH13-209ENST00000587721 NUTM2AQ8IVF1 878 aaPredicted RBP20.61■□□□□ 0.89
RDH13-209ENST00000587721 SHPRHQ149N8 1683 aa20.61■□□□□ 0.89
RDH13-209ENST00000587721 SETD5Q9C0A6 1442 aa20.6■□□□□ 0.89
RDH13-209ENST00000587721 PTCH1Q13635 1447 aa20.57■□□□□ 0.88
RDH13-209ENST00000587721 RXRBP28702 533 aa20.56■□□□□ 0.88
RDH13-209ENST00000587721 C1orf167Q5SNV9 1468 aa20.52■□□□□ 0.88
RDH13-209ENST00000587721 ROBO2Q9HCK4 1378 aa20.52■□□□□ 0.88
RDH13-209ENST00000587721 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
RDH13-209ENST00000587721 CCDC144AA2RUR9 1427 aa20.52■□□□□ 0.87
RDH13-209ENST00000587721 DDX17Q92841 729 aaKnown RBP20.51■□□□□ 0.87
RDH13-209ENST00000587721 AFF2P51816 1311 aa20.51■□□□□ 0.87
RDH13-209ENST00000587721 ACIN1Q9UKV3 1341 aaKnown RBP20.51■□□□□ 0.87
RDH13-209ENST00000587721 NALCNQ8IZF0 1738 aa20.5■□□□□ 0.87
RDH13-209ENST00000587721 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
RDH13-209ENST00000587721 PNPLA6Q8IY17 1366 aa20.49■□□□□ 0.87
RDH13-209ENST00000587721 FOXD1Q16676 465 aa20.49■□□□□ 0.87
RDH13-209ENST00000587721 C8orf37Q96NL8 207 aa20.49■□□□□ 0.87
RDH13-209ENST00000587721 RGL3Q3MIN7 710 aa20.47■□□□□ 0.87
RDH13-209ENST00000587721 ORAI2Q96SN7 254 aa20.47■□□□□ 0.87
RDH13-209ENST00000587721 MPHOSPH9Q99550 1183 aa20.47■□□□□ 0.87
RDH13-209ENST00000587721 SETD1AO15047 1707 aaKnown RBP20.47■□□□□ 0.87
RDH13-209ENST00000587721 ANKRD30BQ9BXX2 1392 aa20.46■□□□□ 0.87
RDH13-209ENST00000587721 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
RDH13-209ENST00000587721 NGLY1Q96IV0 654 aa20.46■□□□□ 0.87
RDH13-209ENST00000587721 SOS2Q07890 1332 aaPredicted RBP20.46■□□□□ 0.87
RDH13-209ENST00000587721 QTRT2Q9H974 415 aaKnown RBP20.45■□□□□ 0.86
RDH13-209ENST00000587721 PPLO60437 1756 aa20.44■□□□□ 0.86
RDH13-209ENST00000587721 ADAMTS2O95450 1211 aa20.44■□□□□ 0.86
RDH13-209ENST00000587721 RBM6P78332 1123 aaKnown RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms