RNA–Protein interactions for RNA: ENST00000586396.2

SF3A2-202, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS ALT2 TSL 3

Gene SF3A2, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-202ENST00000586396 RBM33Q96EV2 1170 aaKnown RBP23.43■■□□□ 1.34
SF3A2-202ENST00000586396 CHIC2Q9UKJ5 165 aa23.43■■□□□ 1.34
SF3A2-202ENST00000586396 CHD2O14647 1828 aaKnown RBP23.42■■□□□ 1.34
SF3A2-202ENST00000586396 APLP2Q06481 763 aa23.41■■□□□ 1.34
SF3A2-202ENST00000586396 POTEAQ6S8J7 498 aa23.41■■□□□ 1.34
SF3A2-202ENST00000586396 BCANQ96GW7 911 aa23.4■■□□□ 1.34
SF3A2-202ENST00000586396 RPRD2Q5VT52 1461 aaKnown RBP23.39■■□□□ 1.34
SF3A2-202ENST00000586396 ADGRL2O95490 1459 aa23.38■■□□□ 1.33
SF3A2-202ENST00000586396 ZFYVE9O95405 1425 aa23.36■■□□□ 1.33
SF3A2-202ENST00000586396 SLC52A1Q9NWF4 448 aa23.36■■□□□ 1.33
SF3A2-202ENST00000586396 COL16A1Q07092 1604 aaPredicted RBP23.36■■□□□ 1.33
SF3A2-202ENST00000586396 TMEM131LA2VDJ0 1609 aa23.34■■□□□ 1.33
SF3A2-202ENST00000586396 JCADQ9P266 1359 aa23.34■■□□□ 1.33
SF3A2-202ENST00000586396 PLEKHG1Q9ULL1 1385 aa23.34■■□□□ 1.33
SF3A2-202ENST00000586396 PPP1R15AO75807 674 aaPredicted RBP23.32■■□□□ 1.32
SF3A2-202ENST00000586396 SLAIN2Q9P270 581 aa23.32■■□□□ 1.32
SF3A2-202ENST00000586396 RIMS2Q9UQ26 1411 aa23.32■■□□□ 1.32
SF3A2-202ENST00000586396 ANKRD50Q9ULJ7 1429 aa23.31■■□□□ 1.32
SF3A2-202ENST00000586396 UNC13BO14795 1591 aa23.29■■□□□ 1.32
SF3A2-202ENST00000586396 DIP2AQ14689 1571 aa23.29■■□□□ 1.32
SF3A2-202ENST00000586396 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.28■■□□□ 1.32
SF3A2-202ENST00000586396 SHPRHQ149N8 1683 aa23.27■■□□□ 1.32
SF3A2-202ENST00000586396 E9PCH4 1651 aa23.26■■□□□ 1.31
SF3A2-202ENST00000586396 LRP6O75581 1613 aa23.26■■□□□ 1.31
SF3A2-202ENST00000586396 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
SF3A2-202ENST00000586396 NCOA3Q9Y6Q9 1424 aa23.25■■□□□ 1.31
SF3A2-202ENST00000586396 HDGFP51858 240 aaKnown RBP23.24■■□□□ 1.31
SF3A2-202ENST00000586396 C14orf37Q86TY3 774 aa23.24■■□□□ 1.31
SF3A2-202ENST00000586396 FAM50AQ14320 339 aaKnown RBP23.23■■□□□ 1.31
SF3A2-202ENST00000586396 MEX3CQ5U5Q3 659 aaKnown RBP23.21■■□□□ 1.31
SF3A2-202ENST00000586396 SPATA31A6Q5VVP1 1343 aa23.21■■□□□ 1.31
SF3A2-202ENST00000586396 IQGAP3Q86VI3 1631 aa23.2■■□□□ 1.3
SF3A2-202ENST00000586396 TRPM2O94759 1503 aa23.2■■□□□ 1.3
SF3A2-202ENST00000586396 ADAMTS13Q76LX8 1427 aa23.2■■□□□ 1.3
SF3A2-202ENST00000586396 CHGAP10645 457 aaKnown RBP23.2■■□□□ 1.3
SF3A2-202ENST00000586396 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.2■■□□□ 1.3
SF3A2-202ENST00000586396 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
SF3A2-202ENST00000586396 PIK3R4Q99570 1358 aa23.17■■□□□ 1.3
SF3A2-202ENST00000586396 CADPS2Q86UW7 1296 aa23.17■■□□□ 1.3
SF3A2-202ENST00000586396 ATF3P18847 181 aa23.15■■□□□ 1.3
SF3A2-202ENST00000586396 NUTM2DQ5VT03 806 aaPredicted RBP23.15■■□□□ 1.3
SF3A2-202ENST00000586396 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
SF3A2-202ENST00000586396 C19orf44Q9H6X5 657 aa23.13■■□□□ 1.29
SF3A2-202ENST00000586396 XRN1Q8IZH2 1706 aaKnown RBP23.12■■□□□ 1.29
SF3A2-202ENST00000586396 TRIM52Q96A61 297 aa23.11■■□□□ 1.29
SF3A2-202ENST00000586396 DCCP43146 1447 aa23.1■■□□□ 1.29
SF3A2-202ENST00000586396 ASXL1Q8IXJ9 1541 aa23.1■■□□□ 1.29
SF3A2-202ENST00000586396 NHSL1Q5SYE7 1610 aa23.1■■□□□ 1.29
SF3A2-202ENST00000586396 NRXN3Q9Y4C0 1643 aa23.1■■□□□ 1.29
SF3A2-202ENST00000586396 SPHKAPQ2M3C7 1700 aa23.09■■□□□ 1.29
SF3A2-202ENST00000586396 PTPRUQ92729 1446 aa23.08■■□□□ 1.29
SF3A2-202ENST00000586396 SRCAPQ6ZRS2 3230 aa23.08■■□□□ 1.28
SF3A2-202ENST00000586396 SETBP1Q9Y6X0 1596 aa23.07■■□□□ 1.28
SF3A2-202ENST00000586396 BRINP3Q76B58 766 aa23.07■■□□□ 1.28
SF3A2-202ENST00000586396 ROCK1Q13464 1354 aa23.06■■□□□ 1.28
SF3A2-202ENST00000586396 UPF1Q92900 1129 aaKnown RBP eCLIP23.06■■□□□ 1.28
SF3A2-202ENST00000586396 AMOTL2Q9Y2J4 779 aa23.06■■□□□ 1.28
SF3A2-202ENST00000586396 CDK12Q9NYV4 1490 aaPredicted RBP23.05■■□□□ 1.28
SF3A2-202ENST00000586396 NUTM2BA6NNL0 878 aaPredicted RBP23.03■■□□□ 1.28
SF3A2-202ENST00000586396 NUTM2EB1AL46 878 aaPredicted RBP23.03■■□□□ 1.28
SF3A2-202ENST00000586396 NUTM2AQ8IVF1 878 aaPredicted RBP23.03■■□□□ 1.28
SF3A2-202ENST00000586396 NALCNQ8IZF0 1738 aa23.02■■□□□ 1.28
SF3A2-202ENST00000586396 RXRBP28702 533 aa23.02■■□□□ 1.28
SF3A2-202ENST00000586396 NUP155O75694 1391 aa23.01■■□□□ 1.27
SF3A2-202ENST00000586396 MST1RQ04912 1400 aa23.01■■□□□ 1.27
SF3A2-202ENST00000586396 SETD5Q9C0A6 1442 aa23.01■■□□□ 1.27
SF3A2-202ENST00000586396 AFF2P51816 1311 aa22.99■■□□□ 1.27
SF3A2-202ENST00000586396 ADGRL3Q9HAR2 1447 aa22.97■■□□□ 1.27
SF3A2-202ENST00000586396 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
SF3A2-202ENST00000586396 ZNF326Q5BKZ1 582 aaKnown RBP22.94■■□□□ 1.26
SF3A2-202ENST00000586396 CLTCL1P53675 1640 aa22.93■■□□□ 1.26
SF3A2-202ENST00000586396 NEXMIFQ5QGS0 1516 aa22.93■■□□□ 1.26
SF3A2-202ENST00000586396 RGS12O14924 1447 aa22.93■■□□□ 1.26
SF3A2-202ENST00000586396 METP08581 1390 aa22.93■■□□□ 1.26
SF3A2-202ENST00000586396 KIF1BO60333 1816 aa22.92■■□□□ 1.26
SF3A2-202ENST00000586396 EP400Q96L91 3159 aa22.92■■□□□ 1.26
SF3A2-202ENST00000586396 LRRC59Q96AG4 307 aaKnown RBP22.92■■□□□ 1.26
SF3A2-202ENST00000586396 PNPLA6Q8IY17 1366 aa22.91■■□□□ 1.26
SF3A2-202ENST00000586396 C8orf37Q96NL8 207 aa22.91■■□□□ 1.26
SF3A2-202ENST00000586396 ITGAEP38570 1179 aa22.9■■□□□ 1.26
SF3A2-202ENST00000586396 LAMC1P11047 1609 aa22.89■■□□□ 1.25
SF3A2-202ENST00000586396 DDX17Q92841 729 aaKnown RBP22.88■■□□□ 1.25
SF3A2-202ENST00000586396 RBM6P78332 1123 aaKnown RBP22.85■■□□□ 1.25
SF3A2-202ENST00000586396 C1orf167Q5SNV9 1468 aa22.85■■□□□ 1.25
SF3A2-202ENST00000586396 PTCH1Q13635 1447 aa22.84■■□□□ 1.25
SF3A2-202ENST00000586396 QTRT2Q9H974 415 aaKnown RBP22.84■■□□□ 1.25
SF3A2-202ENST00000586396 ADAMTS2O95450 1211 aa22.8■■□□□ 1.24
SF3A2-202ENST00000586396 NGLY1Q96IV0 654 aa22.79■■□□□ 1.24
SF3A2-202ENST00000586396 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
SF3A2-202ENST00000586396 ATAD2Q6PL18 1390 aa22.77■■□□□ 1.24
SF3A2-202ENST00000586396 ROBO2Q9HCK4 1378 aa22.76■■□□□ 1.23
SF3A2-202ENST00000586396 PPLO60437 1756 aa22.75■■□□□ 1.23
SF3A2-202ENST00000586396 PRAG1Q86YV5 1406 aa22.74■■□□□ 1.23
SF3A2-202ENST00000586396 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
SF3A2-202ENST00000586396 SOS2Q07890 1332 aaPredicted RBP22.74■■□□□ 1.23
SF3A2-202ENST00000586396 USP21Q9UK80 565 aa22.73■■□□□ 1.23
SF3A2-202ENST00000586396 CDC42BPGQ6DT37 1551 aa22.72■■□□□ 1.23
SF3A2-202ENST00000586396 ORAI2Q96SN7 254 aa22.72■■□□□ 1.23
SF3A2-202ENST00000586396 NAIPQ13075 1403 aa22.72■■□□□ 1.23
SF3A2-202ENST00000586396 HFM1A2PYH4 1435 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms