RNA–Protein interactions for RNA: ENST00000585375.1

GHDC-204, Transcript of GH3 domain containing, humanhuman

TSL 2

Gene GHDC, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-204ENST00000585375 RIMS2Q9UQ26 1411 aa24.34■■□□□ 1.49
GHDC-204ENST00000585375 KCNA6P17658 529 aa24.32■■□□□ 1.48
GHDC-204ENST00000585375 NWD1Q149M9 1564 aa24.32■■□□□ 1.48
GHDC-204ENST00000585375 XIRP1Q702N8 1843 aaKnown RBP24.31■■□□□ 1.48
GHDC-204ENST00000585375 NAIPQ13075 1403 aa24.31■■□□□ 1.48
GHDC-204ENST00000585375 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.31■■□□□ 1.48
GHDC-204ENST00000585375 NKTRP30414 1462 aaKnown RBP24.31■■□□□ 1.48
GHDC-204ENST00000585375 SLC26A8Q96RN1 970 aa24.3■■□□□ 1.48
GHDC-204ENST00000585375 HSPA1LP34931 641 aa24.29■■□□□ 1.48
GHDC-204ENST00000585375 SPHKAPQ2M3C7 1700 aa24.29■■□□□ 1.48
GHDC-204ENST00000585375 PPP1R15AO75807 674 aaPredicted RBP24.28■■□□□ 1.48
GHDC-204ENST00000585375 HFM1A2PYH4 1435 aa24.27■■□□□ 1.48
GHDC-204ENST00000585375 CHGAP10645 457 aaKnown RBP24.26■■□□□ 1.47
GHDC-204ENST00000585375 BCANQ96GW7 911 aa24.26■■□□□ 1.47
GHDC-204ENST00000585375 TMEM94Q12767 1356 aa24.25■■□□□ 1.47
GHDC-204ENST00000585375 DIP2AQ14689 1571 aa24.25■■□□□ 1.47
GHDC-204ENST00000585375 TBX22Q9Y458 520 aa24.23■■□□□ 1.47
GHDC-204ENST00000585375 CHD2O14647 1828 aaKnown RBP24.23■■□□□ 1.47
GHDC-204ENST00000585375 PROSER2Q86WR7 435 aaPredicted RBP24.21■■□□□ 1.47
GHDC-204ENST00000585375 TRPM2O94759 1503 aa24.2■■□□□ 1.46
GHDC-204ENST00000585375 ADAMTS13Q76LX8 1427 aa24.19■■□□□ 1.46
GHDC-204ENST00000585375 PIK3R4Q99570 1358 aa24.19■■□□□ 1.46
GHDC-204ENST00000585375 FAM135BQ49AJ0 1406 aa24.17■■□□□ 1.46
GHDC-204ENST00000585375 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
GHDC-204ENST00000585375 MED1Q15648 1581 aaPredicted RBP24.15■■□□□ 1.46
GHDC-204ENST00000585375 CLTCL1P53675 1640 aa24.14■■□□□ 1.46
GHDC-204ENST00000585375 ILDR2Q71H61 639 aa24.14■■□□□ 1.45
GHDC-204ENST00000585375 MSH6P52701 1360 aa24.14■■□□□ 1.45
GHDC-204ENST00000585375 NUTM2DQ5VT03 806 aaPredicted RBP24.13■■□□□ 1.45
GHDC-204ENST00000585375 SETBP1Q9Y6X0 1596 aa24.12■■□□□ 1.45
GHDC-204ENST00000585375 SENP3Q9H4L4 574 aaPredicted RBP24.11■■□□□ 1.45
GHDC-204ENST00000585375 KIF1BO60333 1816 aa24.1■■□□□ 1.45
GHDC-204ENST00000585375 TRIM52Q96A61 297 aa24.1■■□□□ 1.45
GHDC-204ENST00000585375 NRXN3Q9Y4C0 1643 aa24.09■■□□□ 1.45
GHDC-204ENST00000585375 ZNF326Q5BKZ1 582 aaKnown RBP24.08■■□□□ 1.45
GHDC-204ENST00000585375 RBM33Q96EV2 1170 aaKnown RBP24.08■■□□□ 1.45
GHDC-204ENST00000585375 NEXMIFQ5QGS0 1516 aa24.08■■□□□ 1.45
GHDC-204ENST00000585375 SLC4A1APQ9BWU0 796 aaKnown RBP24.07■■□□□ 1.44
GHDC-204ENST00000585375 ROBO1Q9Y6N7 1651 aa24.07■■□□□ 1.44
GHDC-204ENST00000585375 SOCS7O14512 581 aa24.03■■□□□ 1.44
GHDC-204ENST00000585375 XRN1Q8IZH2 1706 aaKnown RBP24.03■■□□□ 1.44
GHDC-204ENST00000585375 PTPRUQ92729 1446 aa24.02■■□□□ 1.44
GHDC-204ENST00000585375 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
GHDC-204ENST00000585375 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
GHDC-204ENST00000585375 ACIN1Q9UKV3 1341 aaKnown RBP24.02■■□□□ 1.44
GHDC-204ENST00000585375 C19orf44Q9H6X5 657 aa23.99■■□□□ 1.43
GHDC-204ENST00000585375 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.98■■□□□ 1.43
GHDC-204ENST00000585375 C14orf37Q86TY3 774 aa23.98■■□□□ 1.43
GHDC-204ENST00000585375 CADPS2Q86UW7 1296 aa23.98■■□□□ 1.43
GHDC-204ENST00000585375 RPGRIP1LQ68CZ1 1315 aa23.98■■□□□ 1.43
GHDC-204ENST00000585375 VGFO15240 615 aaPredicted RBP23.97■■□□□ 1.43
GHDC-204ENST00000585375 DCCP43146 1447 aa23.97■■□□□ 1.43
GHDC-204ENST00000585375 METP08581 1390 aa23.96■■□□□ 1.43
GHDC-204ENST00000585375 PHF23Q9BUL5 403 aaPredicted RBP23.95■■□□□ 1.42
GHDC-204ENST00000585375 ATF3P18847 181 aa23.94■■□□□ 1.42
GHDC-204ENST00000585375 PPLO60437 1756 aa23.93■■□□□ 1.42
GHDC-204ENST00000585375 PHLPP1O60346 1717 aa23.93■■□□□ 1.42
GHDC-204ENST00000585375 CCDC144AA2RUR9 1427 aa23.92■■□□□ 1.42
GHDC-204ENST00000585375 MPHOSPH9Q99550 1183 aa23.91■■□□□ 1.42
GHDC-204ENST00000585375 SETD1AO15047 1707 aaKnown RBP23.9■■□□□ 1.42
GHDC-204ENST00000585375 PRAG1Q86YV5 1406 aa23.89■■□□□ 1.41
GHDC-204ENST00000585375 SETD5Q9C0A6 1442 aa23.89■■□□□ 1.41
GHDC-204ENST00000585375 COL16A1Q07092 1604 aaPredicted RBP23.88■■□□□ 1.41
GHDC-204ENST00000585375 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
GHDC-204ENST00000585375 PTCH1Q13635 1447 aa23.87■■□□□ 1.41
GHDC-204ENST00000585375 FOXD1Q16676 465 aa23.87■■□□□ 1.41
GHDC-204ENST00000585375 ADGRL3Q9HAR2 1447 aa23.86■■□□□ 1.41
GHDC-204ENST00000585375 JCADQ9P266 1359 aa23.86■■□□□ 1.41
GHDC-204ENST00000585375 SPATA31E1Q6ZUB1 1445 aa23.85■■□□□ 1.41
GHDC-204ENST00000585375 MST1RQ04912 1400 aa23.83■■□□□ 1.4
GHDC-204ENST00000585375 NALCNQ8IZF0 1738 aa23.82■■□□□ 1.4
GHDC-204ENST00000585375 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
GHDC-204ENST00000585375 IFT172Q9UG01 1749 aa23.81■■□□□ 1.4
GHDC-204ENST00000585375 BRINP3Q76B58 766 aa23.8■■□□□ 1.4
GHDC-204ENST00000585375 ASXL1Q8IXJ9 1541 aa23.79■■□□□ 1.4
GHDC-204ENST00000585375 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
GHDC-204ENST00000585375 RGS17Q9UGC6 210 aaPredicted RBP23.77■■□□□ 1.4
GHDC-204ENST00000585375 SPATA31A6Q5VVP1 1343 aa23.77■■□□□ 1.4
GHDC-204ENST00000585375 ROBO2Q9HCK4 1378 aa23.77■■□□□ 1.4
GHDC-204ENST00000585375 SHPRHQ149N8 1683 aa23.76■■□□□ 1.39
GHDC-204ENST00000585375 NHSL1Q5SYE7 1610 aa23.76■■□□□ 1.39
GHDC-204ENST00000585375 RGL3Q3MIN7 710 aa23.75■■□□□ 1.39
GHDC-204ENST00000585375 ADGRF5Q8IZF2 1346 aa23.75■■□□□ 1.39
GHDC-204ENST00000585375 PIK3C2GO75747 1445 aa23.73■■□□□ 1.39
GHDC-204ENST00000585375 TECPR2O15040 1411 aa23.71■■□□□ 1.39
GHDC-204ENST00000585375 C1orf167Q5SNV9 1468 aa23.7■■□□□ 1.38
GHDC-204ENST00000585375 HRCP23327 699 aa23.7■■□□□ 1.38
GHDC-204ENST00000585375 MYOM2P54296 1465 aa23.68■■□□□ 1.38
GHDC-204ENST00000585375 KNDC1Q76NI1 1749 aa23.68■■□□□ 1.38
GHDC-204ENST00000585375 LAMC1P11047 1609 aa23.68■■□□□ 1.38
GHDC-204ENST00000585375 CDC42BPGQ6DT37 1551 aa23.68■■□□□ 1.38
GHDC-204ENST00000585375 LRPPRCP42704 1394 aaKnown RBP23.67■■□□□ 1.38
GHDC-204ENST00000585375 LRP6O75581 1613 aa23.67■■□□□ 1.38
GHDC-204ENST00000585375 NRXN1Q9ULB1 1477 aa23.67■■□□□ 1.38
GHDC-204ENST00000585375 ABCC11Q96J66 1382 aa23.66■■□□□ 1.38
GHDC-204ENST00000585375 LRRC59Q96AG4 307 aaKnown RBP23.65■■□□□ 1.38
GHDC-204ENST00000585375 POTEAQ6S8J7 498 aa23.63■■□□□ 1.37
GHDC-204ENST00000585375 YTHDC2Q9H6S0 1430 aaKnown RBP23.61■■□□□ 1.37
GHDC-204ENST00000585375 C14orf93Q9H972 538 aaKnown RBP23.61■■□□□ 1.37
GHDC-204ENST00000585375 MEX3CQ5U5Q3 659 aaKnown RBP23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms