RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 RPRD2Q5VT52 1461 aaKnown RBP25.21■■□□□ 1.63
SREBF1-221ENST00000583080 ZFYVE9O95405 1425 aa25.21■■□□□ 1.63
SREBF1-221ENST00000583080 ANKRD50Q9ULJ7 1429 aa25.21■■□□□ 1.63
SREBF1-221ENST00000583080 GCC2Q8IWJ2 1684 aa25.21■■□□□ 1.63
SREBF1-221ENST00000583080 SLC52A1Q9NWF4 448 aa25.2■■□□□ 1.62
SREBF1-221ENST00000583080 FAM50AQ14320 339 aaKnown RBP25.19■■□□□ 1.62
SREBF1-221ENST00000583080 TMEM131LA2VDJ0 1609 aa25.16■■□□□ 1.62
SREBF1-221ENST00000583080 BCANQ96GW7 911 aa25.16■■□□□ 1.62
SREBF1-221ENST00000583080 PLEKHG1Q9ULL1 1385 aa25.16■■□□□ 1.62
SREBF1-221ENST00000583080 UNC13BO14795 1591 aa25.15■■□□□ 1.62
SREBF1-221ENST00000583080 RIMS2Q9UQ26 1411 aa25.15■■□□□ 1.62
SREBF1-221ENST00000583080 MSH6P52701 1360 aa25.15■■□□□ 1.62
SREBF1-221ENST00000583080 CHD2O14647 1828 aaKnown RBP25.14■■□□□ 1.61
SREBF1-221ENST00000583080 POTEAQ6S8J7 498 aa25.13■■□□□ 1.61
SREBF1-221ENST00000583080 PHLPP1O60346 1717 aa25.12■■□□□ 1.61
SREBF1-221ENST00000583080 E9PCH4 1651 aa25.1■■□□□ 1.61
SREBF1-221ENST00000583080 PPP1R15AO75807 674 aaPredicted RBP25.09■■□□□ 1.61
SREBF1-221ENST00000583080 SLAIN2Q9P270 581 aa25.07■■□□□ 1.6
SREBF1-221ENST00000583080 COL16A1Q07092 1604 aaPredicted RBP25.06■■□□□ 1.6
SREBF1-221ENST00000583080 ADAMTS13Q76LX8 1427 aa25.05■■□□□ 1.6
SREBF1-221ENST00000583080 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
SREBF1-221ENST00000583080 SETD1AO15047 1707 aaKnown RBP25.03■■□□□ 1.6
SREBF1-221ENST00000583080 CHGAP10645 457 aaKnown RBP25.03■■□□□ 1.6
SREBF1-221ENST00000583080 NUTM2DQ5VT03 806 aaPredicted RBP25.03■■□□□ 1.6
SREBF1-221ENST00000583080 JCADQ9P266 1359 aa25.03■■□□□ 1.6
SREBF1-221ENST00000583080 DIP2AQ14689 1571 aa25.01■■□□□ 1.59
SREBF1-221ENST00000583080 TBX22Q9Y458 520 aa25.01■■□□□ 1.59
SREBF1-221ENST00000583080 HDGFP51858 240 aaKnown RBP25■■□□□ 1.59
SREBF1-221ENST00000583080 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.99■■□□□ 1.59
SREBF1-221ENST00000583080 LRP6O75581 1613 aa24.98■■□□□ 1.59
SREBF1-221ENST00000583080 NCOA3Q9Y6Q9 1424 aa24.98■■□□□ 1.59
SREBF1-221ENST00000583080 ROCK1Q13464 1354 aa24.98■■□□□ 1.59
SREBF1-221ENST00000583080 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.98■■□□□ 1.59
SREBF1-221ENST00000583080 C14orf37Q86TY3 774 aa24.96■■□□□ 1.59
SREBF1-221ENST00000583080 AHDC1Q5TGY3 1603 aaPredicted RBP24.95■■□□□ 1.58
SREBF1-221ENST00000583080 TRPM2O94759 1503 aa24.94■■□□□ 1.58
SREBF1-221ENST00000583080 PTPRUQ92729 1446 aa24.94■■□□□ 1.58
SREBF1-221ENST00000583080 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
SREBF1-221ENST00000583080 NRXN3Q9Y4C0 1643 aa24.92■■□□□ 1.58
SREBF1-221ENST00000583080 NUP155O75694 1391 aa24.92■■□□□ 1.58
SREBF1-221ENST00000583080 SHPRHQ149N8 1683 aa24.9■■□□□ 1.58
SREBF1-221ENST00000583080 CADPS2Q86UW7 1296 aa24.89■■□□□ 1.58
SREBF1-221ENST00000583080 C19orf44Q9H6X5 657 aa24.89■■□□□ 1.58
SREBF1-221ENST00000583080 XRN1Q8IZH2 1706 aaKnown RBP24.89■■□□□ 1.57
SREBF1-221ENST00000583080 SPATA31A6Q5VVP1 1343 aa24.87■■□□□ 1.57
SREBF1-221ENST00000583080 ATF3P18847 181 aa24.87■■□□□ 1.57
SREBF1-221ENST00000583080 AMOTL2Q9Y2J4 779 aa24.87■■□□□ 1.57
SREBF1-221ENST00000583080 SPHKAPQ2M3C7 1700 aa24.86■■□□□ 1.57
SREBF1-221ENST00000583080 ITGAEP38570 1179 aa24.86■■□□□ 1.57
SREBF1-221ENST00000583080 SETBP1Q9Y6X0 1596 aa24.85■■□□□ 1.57
SREBF1-221ENST00000583080 MEX3CQ5U5Q3 659 aaKnown RBP24.83■■□□□ 1.57
SREBF1-221ENST00000583080 BRINP3Q76B58 766 aa24.83■■□□□ 1.57
SREBF1-221ENST00000583080 ASXL1Q8IXJ9 1541 aa24.82■■□□□ 1.56
SREBF1-221ENST00000583080 DCCP43146 1447 aa24.82■■□□□ 1.56
SREBF1-221ENST00000583080 MST1RQ04912 1400 aa24.79■■□□□ 1.56
SREBF1-221ENST00000583080 METP08581 1390 aa24.79■■□□□ 1.56
SREBF1-221ENST00000583080 NHSL1Q5SYE7 1610 aa24.78■■□□□ 1.56
SREBF1-221ENST00000583080 CLTCL1P53675 1640 aa24.77■■□□□ 1.56
SREBF1-221ENST00000583080 ZNF772Q68DY9 489 aaPredicted RBP24.77■■□□□ 1.56
SREBF1-221ENST00000583080 PPARGC1BQ86YN6 1023 aaKnown RBP24.76■■□□□ 1.55
SREBF1-221ENST00000583080 TRIM52Q96A61 297 aa24.76■■□□□ 1.55
SREBF1-221ENST00000583080 NEXMIFQ5QGS0 1516 aa24.76■■□□□ 1.55
SREBF1-221ENST00000583080 NALCNQ8IZF0 1738 aa24.75■■□□□ 1.55
SREBF1-221ENST00000583080 NUTM2BA6NNL0 878 aaPredicted RBP24.74■■□□□ 1.55
SREBF1-221ENST00000583080 NUTM2EB1AL46 878 aaPredicted RBP24.74■■□□□ 1.55
SREBF1-221ENST00000583080 ZNF326Q5BKZ1 582 aaKnown RBP24.74■■□□□ 1.55
SREBF1-221ENST00000583080 NUTM2AQ8IVF1 878 aaPredicted RBP24.74■■□□□ 1.55
SREBF1-221ENST00000583080 SETD5Q9C0A6 1442 aa24.73■■□□□ 1.55
SREBF1-221ENST00000583080 ADGRL3Q9HAR2 1447 aa24.73■■□□□ 1.55
SREBF1-221ENST00000583080 UPF1Q92900 1129 aaKnown RBP eCLIP24.7■■□□□ 1.54
SREBF1-221ENST00000583080 DDX17Q92841 729 aaKnown RBP24.68■■□□□ 1.54
SREBF1-221ENST00000583080 AFF2P51816 1311 aa24.67■■□□□ 1.54
SREBF1-221ENST00000583080 RXRBP28702 533 aa24.66■■□□□ 1.54
SREBF1-221ENST00000583080 PNPLA6Q8IY17 1366 aa24.66■■□□□ 1.54
SREBF1-221ENST00000583080 CDK12Q9NYV4 1490 aaPredicted RBP24.65■■□□□ 1.54
SREBF1-221ENST00000583080 KIF1BO60333 1816 aa24.65■■□□□ 1.54
SREBF1-221ENST00000583080 NAIPQ13075 1403 aa24.61■■□□□ 1.53
SREBF1-221ENST00000583080 LRRC59Q96AG4 307 aaKnown RBP24.61■■□□□ 1.53
SREBF1-221ENST00000583080 C1orf167Q5SNV9 1468 aa24.61■■□□□ 1.53
SREBF1-221ENST00000583080 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
SREBF1-221ENST00000583080 RGS12O14924 1447 aa24.6■■□□□ 1.53
SREBF1-221ENST00000583080 RRBP1Q9P2E9 1410 aaKnown RBP24.6■■□□□ 1.53
SREBF1-221ENST00000583080 C8orf37Q96NL8 207 aa24.59■■□□□ 1.53
SREBF1-221ENST00000583080 LAMC1P11047 1609 aa24.58■■□□□ 1.53
SREBF1-221ENST00000583080 ROBO2Q9HCK4 1378 aa24.58■■□□□ 1.53
SREBF1-221ENST00000583080 PRAG1Q86YV5 1406 aa24.53■■□□□ 1.52
SREBF1-221ENST00000583080 ORAI2Q96SN7 254 aa24.52■■□□□ 1.52
SREBF1-221ENST00000583080 PPLO60437 1756 aa24.52■■□□□ 1.52
SREBF1-221ENST00000583080 ADAMTS2O95450 1211 aa24.51■■□□□ 1.51
SREBF1-221ENST00000583080 QTRT2Q9H974 415 aaKnown RBP24.51■■□□□ 1.51
SREBF1-221ENST00000583080 RBM6P78332 1123 aaKnown RBP24.5■■□□□ 1.51
SREBF1-221ENST00000583080 SOS2Q07890 1332 aaPredicted RBP24.5■■□□□ 1.51
SREBF1-221ENST00000583080 VGFO15240 615 aaPredicted RBP24.49■■□□□ 1.51
SREBF1-221ENST00000583080 HFM1A2PYH4 1435 aa24.48■■□□□ 1.51
SREBF1-221ENST00000583080 NGLY1Q96IV0 654 aa24.46■■□□□ 1.51
SREBF1-221ENST00000583080 COL22A1Q8NFW1 1626 aaPredicted RBP24.45■■□□□ 1.5
SREBF1-221ENST00000583080 RPGRIP1LQ68CZ1 1315 aa24.44■■□□□ 1.5
SREBF1-221ENST00000583080 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
SREBF1-221ENST00000583080 SLC4A1APQ9BWU0 796 aaKnown RBP24.42■■□□□ 1.5
SREBF1-221ENST00000583080 MYOM2P54296 1465 aa24.4■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms