RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 NUP155O75694 1391 aa20.71■□□□□ 0.91
PGAP3-207ENST00000580898 MED1Q15648 1581 aaPredicted RBP20.7■□□□□ 0.9
PGAP3-207ENST00000580898 PLEKHG1Q9ULL1 1385 aa20.7■□□□□ 0.9
PGAP3-207ENST00000580898 RIMS2Q9UQ26 1411 aa20.7■□□□□ 0.9
PGAP3-207ENST00000580898 NKTRP30414 1462 aaKnown RBP20.69■□□□□ 0.9
PGAP3-207ENST00000580898 CHGAP10645 457 aaKnown RBP20.69■□□□□ 0.9
PGAP3-207ENST00000580898 TMEM94Q12767 1356 aa20.69■□□□□ 0.9
PGAP3-207ENST00000580898 ZFYVE9O95405 1425 aa20.69■□□□□ 0.9
PGAP3-207ENST00000580898 TMEM131LA2VDJ0 1609 aa20.68■□□□□ 0.9
PGAP3-207ENST00000580898 E9PCH4 1651 aa20.68■□□□□ 0.9
PGAP3-207ENST00000580898 PROSER2Q86WR7 435 aaPredicted RBP20.68■□□□□ 0.9
PGAP3-207ENST00000580898 PPARGC1BQ86YN6 1023 aaKnown RBP20.67■□□□□ 0.9
PGAP3-207ENST00000580898 NWD1Q149M9 1564 aa20.67■□□□□ 0.9
PGAP3-207ENST00000580898 PHF23Q9BUL5 403 aaPredicted RBP20.65■□□□□ 0.9
PGAP3-207ENST00000580898 SENP3Q9H4L4 574 aaPredicted RBP20.65■□□□□ 0.9
PGAP3-207ENST00000580898 XIRP1Q702N8 1843 aaKnown RBP20.64■□□□□ 0.9
PGAP3-207ENST00000580898 FAM135BQ49AJ0 1406 aa20.63■□□□□ 0.89
PGAP3-207ENST00000580898 MSH6P52701 1360 aa20.63■□□□□ 0.89
PGAP3-207ENST00000580898 MYO5BQ9ULV0 1848 aa20.62■□□□□ 0.89
PGAP3-207ENST00000580898 TBX22Q9Y458 520 aa20.61■□□□□ 0.89
PGAP3-207ENST00000580898 RRBP1Q9P2E9 1410 aaKnown RBP20.61■□□□□ 0.89
PGAP3-207ENST00000580898 DIP2AQ14689 1571 aa20.6■□□□□ 0.89
PGAP3-207ENST00000580898 PIK3R4Q99570 1358 aa20.58■□□□□ 0.88
PGAP3-207ENST00000580898 NCOA3Q9Y6Q9 1424 aa20.57■□□□□ 0.88
PGAP3-207ENST00000580898 CHD2O14647 1828 aaKnown RBP20.56■□□□□ 0.88
PGAP3-207ENST00000580898 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
PGAP3-207ENST00000580898 SPHKAPQ2M3C7 1700 aa20.54■□□□□ 0.88
PGAP3-207ENST00000580898 NUTM2DQ5VT03 806 aaPredicted RBP20.54■□□□□ 0.88
PGAP3-207ENST00000580898 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
PGAP3-207ENST00000580898 ROBO1Q9Y6N7 1651 aa20.54■□□□□ 0.88
PGAP3-207ENST00000580898 TRPM2O94759 1503 aa20.53■□□□□ 0.88
PGAP3-207ENST00000580898 ADAMTS13Q76LX8 1427 aa20.53■□□□□ 0.88
PGAP3-207ENST00000580898 ZNF326Q5BKZ1 582 aaKnown RBP20.52■□□□□ 0.88
PGAP3-207ENST00000580898 SLAIN2Q9P270 581 aa20.51■□□□□ 0.87
PGAP3-207ENST00000580898 NAIPQ13075 1403 aa20.51■□□□□ 0.87
PGAP3-207ENST00000580898 CADPS2Q86UW7 1296 aa20.47■□□□□ 0.87
PGAP3-207ENST00000580898 HFM1A2PYH4 1435 aa20.46■□□□□ 0.87
PGAP3-207ENST00000580898 ATF3P18847 181 aa20.46■□□□□ 0.87
PGAP3-207ENST00000580898 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
PGAP3-207ENST00000580898 AMOTL2Q9Y2J4 779 aa20.46■□□□□ 0.87
PGAP3-207ENST00000580898 SETBP1Q9Y6X0 1596 aa20.46■□□□□ 0.87
PGAP3-207ENST00000580898 TRIM52Q96A61 297 aa20.45■□□□□ 0.86
PGAP3-207ENST00000580898 CLTCL1P53675 1640 aa20.42■□□□□ 0.86
PGAP3-207ENST00000580898 PHLPP1O60346 1717 aa20.42■□□□□ 0.86
PGAP3-207ENST00000580898 JCADQ9P266 1359 aa20.42■□□□□ 0.86
PGAP3-207ENST00000580898 DCCP43146 1447 aa20.4■□□□□ 0.86
PGAP3-207ENST00000580898 PTPRUQ92729 1446 aa20.4■□□□□ 0.86
PGAP3-207ENST00000580898 SLC4A1APQ9BWU0 796 aaKnown RBP20.4■□□□□ 0.86
PGAP3-207ENST00000580898 KIF1BO60333 1816 aa20.39■□□□□ 0.86
PGAP3-207ENST00000580898 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.39■□□□□ 0.86
PGAP3-207ENST00000580898 NRXN3Q9Y4C0 1643 aa20.39■□□□□ 0.86
PGAP3-207ENST00000580898 NEXMIFQ5QGS0 1516 aa20.38■□□□□ 0.85
PGAP3-207ENST00000580898 XRN1Q8IZH2 1706 aaKnown RBP20.38■□□□□ 0.85
PGAP3-207ENST00000580898 VGFO15240 615 aaPredicted RBP20.37■□□□□ 0.85
PGAP3-207ENST00000580898 RPGRIP1LQ68CZ1 1315 aa20.35■□□□□ 0.85
PGAP3-207ENST00000580898 METP08581 1390 aa20.34■□□□□ 0.85
PGAP3-207ENST00000580898 RGS17Q9UGC6 210 aaPredicted RBP20.34■□□□□ 0.85
PGAP3-207ENST00000580898 COL16A1Q07092 1604 aaPredicted RBP20.34■□□□□ 0.85
PGAP3-207ENST00000580898 AHDC1Q5TGY3 1603 aaPredicted RBP20.34■□□□□ 0.85
PGAP3-207ENST00000580898 SPATA31A6Q5VVP1 1343 aa20.33■□□□□ 0.85
PGAP3-207ENST00000580898 ACIN1Q9UKV3 1341 aaKnown RBP20.31■□□□□ 0.84
PGAP3-207ENST00000580898 ADGRL3Q9HAR2 1447 aa20.3■□□□□ 0.84
PGAP3-207ENST00000580898 BRINP3Q76B58 766 aa20.3■□□□□ 0.84
PGAP3-207ENST00000580898 MEX3CQ5U5Q3 659 aaKnown RBP20.29■□□□□ 0.84
PGAP3-207ENST00000580898 PTCH1Q13635 1447 aa20.27■□□□□ 0.84
PGAP3-207ENST00000580898 ASXL1Q8IXJ9 1541 aa20.27■□□□□ 0.83
PGAP3-207ENST00000580898 CCDC144AA2RUR9 1427 aa20.27■□□□□ 0.83
PGAP3-207ENST00000580898 MST1RQ04912 1400 aa20.27■□□□□ 0.83
PGAP3-207ENST00000580898 SHPRHQ149N8 1683 aa20.26■□□□□ 0.83
PGAP3-207ENST00000580898 POTEAQ6S8J7 498 aa20.25■□□□□ 0.83
PGAP3-207ENST00000580898 NALCNQ8IZF0 1738 aa20.22■□□□□ 0.83
PGAP3-207ENST00000580898 PRAG1Q86YV5 1406 aa20.22■□□□□ 0.83
PGAP3-207ENST00000580898 PPLO60437 1756 aa20.22■□□□□ 0.83
PGAP3-207ENST00000580898 ZNF772Q68DY9 489 aaPredicted RBP20.22■□□□□ 0.83
PGAP3-207ENST00000580898 SETD5Q9C0A6 1442 aa20.21■□□□□ 0.83
PGAP3-207ENST00000580898 LRRC59Q96AG4 307 aaKnown RBP20.21■□□□□ 0.83
PGAP3-207ENST00000580898 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
PGAP3-207ENST00000580898 SETD1AO15047 1707 aaKnown RBP20.21■□□□□ 0.83
PGAP3-207ENST00000580898 FOXD1Q16676 465 aa20.2■□□□□ 0.82
PGAP3-207ENST00000580898 LRP6O75581 1613 aa20.2■□□□□ 0.82
PGAP3-207ENST00000580898 NHSL1Q5SYE7 1610 aa20.2■□□□□ 0.82
PGAP3-207ENST00000580898 ANKRD30BQ9BXX2 1392 aa20.2■□□□□ 0.82
PGAP3-207ENST00000580898 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
PGAP3-207ENST00000580898 C1orf167Q5SNV9 1468 aa20.18■□□□□ 0.82
PGAP3-207ENST00000580898 NUTM2BA6NNL0 878 aaPredicted RBP20.16■□□□□ 0.82
PGAP3-207ENST00000580898 NUTM2EB1AL46 878 aaPredicted RBP20.16■□□□□ 0.82
PGAP3-207ENST00000580898 RGL3Q3MIN7 710 aa20.16■□□□□ 0.82
PGAP3-207ENST00000580898 NUTM2AQ8IVF1 878 aaPredicted RBP20.16■□□□□ 0.82
PGAP3-207ENST00000580898 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
PGAP3-207ENST00000580898 ADGRF5Q8IZF2 1346 aa20.13■□□□□ 0.81
PGAP3-207ENST00000580898 PNPLA6Q8IY17 1366 aa20.1■□□□□ 0.81
PGAP3-207ENST00000580898 CDC42BPGQ6DT37 1551 aa20.1■□□□□ 0.81
PGAP3-207ENST00000580898 LAMC1P11047 1609 aa20.09■□□□□ 0.81
PGAP3-207ENST00000580898 DDX17Q92841 729 aaKnown RBP20.09■□□□□ 0.81
PGAP3-207ENST00000580898 IFT172Q9UG01 1749 aa20.09■□□□□ 0.81
PGAP3-207ENST00000580898 TECPR2O15040 1411 aa20.09■□□□□ 0.81
PGAP3-207ENST00000580898 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.81
PGAP3-207ENST00000580898 RXRBP28702 533 aa20.08■□□□□ 0.81
PGAP3-207ENST00000580898 ORAI2Q96SN7 254 aa20.08■□□□□ 0.81
PGAP3-207ENST00000580898 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms