RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 MSH6P52701 1360 aa30.02■■■□□ 2.4
NDEL1-209ENST00000580738 SLC52A1Q9NWF4 448 aa30■■■□□ 2.39
NDEL1-209ENST00000580738 APLP2Q06481 763 aa29.96■■■□□ 2.39
NDEL1-209ENST00000580738 JCADQ9P266 1359 aa29.94■■■□□ 2.38
NDEL1-209ENST00000580738 ZFYVE9O95405 1425 aa29.93■■■□□ 2.38
NDEL1-209ENST00000580738 PHLPP1O60346 1717 aa29.93■■■□□ 2.38
NDEL1-209ENST00000580738 PLEKHG1Q9ULL1 1385 aa29.91■■■□□ 2.38
NDEL1-209ENST00000580738 SETD1AO15047 1707 aaKnown RBP29.9■■■□□ 2.38
NDEL1-209ENST00000580738 PPP1R15AO75807 674 aaPredicted RBP29.89■■■□□ 2.38
NDEL1-209ENST00000580738 RIMS2Q9UQ26 1411 aa29.88■■■□□ 2.37
NDEL1-209ENST00000580738 RPRD2Q5VT52 1461 aaKnown RBP29.87■■■□□ 2.37
NDEL1-209ENST00000580738 CHD2O14647 1828 aaKnown RBP29.86■■■□□ 2.37
NDEL1-209ENST00000580738 ADGRL2O95490 1459 aa29.86■■■□□ 2.37
NDEL1-209ENST00000580738 TBX22Q9Y458 520 aa29.85■■■□□ 2.37
NDEL1-209ENST00000580738 HDGFP51858 240 aaKnown RBP29.84■■■□□ 2.37
NDEL1-209ENST00000580738 COL16A1Q07092 1604 aaPredicted RBP29.84■■■□□ 2.37
NDEL1-209ENST00000580738 ANKRD50Q9ULJ7 1429 aa29.83■■■□□ 2.37
NDEL1-209ENST00000580738 MYO5BQ9ULV0 1848 aa29.82■■■□□ 2.36
NDEL1-209ENST00000580738 LRP6O75581 1613 aa29.82■■■□□ 2.36
NDEL1-209ENST00000580738 C14orf37Q86TY3 774 aa29.82■■■□□ 2.36
NDEL1-209ENST00000580738 NUTM2DQ5VT03 806 aaPredicted RBP29.81■■■□□ 2.36
NDEL1-209ENST00000580738 TMEM131LA2VDJ0 1609 aa29.81■■■□□ 2.36
NDEL1-209ENST00000580738 GCC2Q8IWJ2 1684 aa29.8■■■□□ 2.36
NDEL1-209ENST00000580738 FAM50AQ14320 339 aaKnown RBP29.8■■■□□ 2.36
NDEL1-209ENST00000580738 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
NDEL1-209ENST00000580738 CHGAP10645 457 aaKnown RBP29.79■■■□□ 2.36
NDEL1-209ENST00000580738 SPATA31A6Q5VVP1 1343 aa29.78■■■□□ 2.36
NDEL1-209ENST00000580738 MEX3CQ5U5Q3 659 aaKnown RBP29.77■■■□□ 2.36
NDEL1-209ENST00000580738 ADAMTS13Q76LX8 1427 aa29.77■■■□□ 2.36
NDEL1-209ENST00000580738 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.76■■■□□ 2.35
NDEL1-209ENST00000580738 C19orf44Q9H6X5 657 aa29.75■■■□□ 2.35
NDEL1-209ENST00000580738 CADPS2Q86UW7 1296 aa29.74■■■□□ 2.35
NDEL1-209ENST00000580738 ATF3P18847 181 aa29.73■■■□□ 2.35
NDEL1-209ENST00000580738 ZNF772Q68DY9 489 aaPredicted RBP29.73■■■□□ 2.35
NDEL1-209ENST00000580738 TRIM52Q96A61 297 aa29.73■■■□□ 2.35
NDEL1-209ENST00000580738 UPF1Q92900 1129 aaKnown RBP eCLIP29.72■■■□□ 2.35
NDEL1-209ENST00000580738 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.71■■■□□ 2.35
NDEL1-209ENST00000580738 AHDC1Q5TGY3 1603 aaPredicted RBP29.71■■■□□ 2.35
NDEL1-209ENST00000580738 PIK3R4Q99570 1358 aa29.67■■■□□ 2.34
NDEL1-209ENST00000580738 BRINP3Q76B58 766 aa29.67■■■□□ 2.34
NDEL1-209ENST00000580738 AMOTL2Q9Y2J4 779 aa29.67■■■□□ 2.34
NDEL1-209ENST00000580738 DIP2AQ14689 1571 aa29.65■■■□□ 2.34
NDEL1-209ENST00000580738 SHPRHQ149N8 1683 aa29.65■■■□□ 2.34
NDEL1-209ENST00000580738 PTPRUQ92729 1446 aa29.64■■■□□ 2.34
NDEL1-209ENST00000580738 NUTM2BA6NNL0 878 aaPredicted RBP29.64■■■□□ 2.34
NDEL1-209ENST00000580738 NUTM2EB1AL46 878 aaPredicted RBP29.64■■■□□ 2.34
NDEL1-209ENST00000580738 NUTM2AQ8IVF1 878 aaPredicted RBP29.64■■■□□ 2.34
NDEL1-209ENST00000580738 UNC13BO14795 1591 aa29.64■■■□□ 2.33
NDEL1-209ENST00000580738 E9PCH4 1651 aa29.63■■■□□ 2.33
NDEL1-209ENST00000580738 RXRBP28702 533 aa29.63■■■□□ 2.33
NDEL1-209ENST00000580738 TRPM2O94759 1503 aa29.59■■■□□ 2.33
NDEL1-209ENST00000580738 AFF2P51816 1311 aa29.54■■■□□ 2.32
NDEL1-209ENST00000580738 ASXL1Q8IXJ9 1541 aa29.53■■■□□ 2.32
NDEL1-209ENST00000580738 DCCP43146 1447 aa29.53■■■□□ 2.32
NDEL1-209ENST00000580738 IQGAP3Q86VI3 1631 aa29.53■■■□□ 2.32
NDEL1-209ENST00000580738 NUP155O75694 1391 aa29.52■■■□□ 2.32
NDEL1-209ENST00000580738 MST1RQ04912 1400 aa29.51■■■□□ 2.31
NDEL1-209ENST00000580738 SETD5Q9C0A6 1442 aa29.51■■■□□ 2.31
NDEL1-209ENST00000580738 CDK12Q9NYV4 1490 aaPredicted RBP29.5■■■□□ 2.31
NDEL1-209ENST00000580738 ROCK1Q13464 1354 aa29.5■■■□□ 2.31
NDEL1-209ENST00000580738 DDX17Q92841 729 aaKnown RBP29.48■■■□□ 2.31
NDEL1-209ENST00000580738 NRXN3Q9Y4C0 1643 aa29.48■■■□□ 2.31
NDEL1-209ENST00000580738 XRN1Q8IZH2 1706 aaKnown RBP29.48■■■□□ 2.31
NDEL1-209ENST00000580738 LRRC59Q96AG4 307 aaKnown RBP29.47■■■□□ 2.31
NDEL1-209ENST00000580738 METP08581 1390 aa29.47■■■□□ 2.31
NDEL1-209ENST00000580738 SETBP1Q9Y6X0 1596 aa29.44■■■□□ 2.3
NDEL1-209ENST00000580738 C8orf37Q96NL8 207 aa29.44■■■□□ 2.3
NDEL1-209ENST00000580738 NHSL1Q5SYE7 1610 aa29.43■■■□□ 2.3
NDEL1-209ENST00000580738 ZNF326Q5BKZ1 582 aaKnown RBP29.43■■■□□ 2.3
NDEL1-209ENST00000580738 QTRT2Q9H974 415 aaKnown RBP29.43■■■□□ 2.3
NDEL1-209ENST00000580738 ITGAEP38570 1179 aa29.41■■■□□ 2.3
NDEL1-209ENST00000580738 PNPLA6Q8IY17 1366 aa29.4■■■□□ 2.3
NDEL1-209ENST00000580738 RGS12O14924 1447 aa29.4■■■□□ 2.3
NDEL1-209ENST00000580738 ADGRL3Q9HAR2 1447 aa29.38■■■□□ 2.29
NDEL1-209ENST00000580738 RBM6P78332 1123 aaKnown RBP29.38■■■□□ 2.29
NDEL1-209ENST00000580738 SRCAPQ6ZRS2 3230 aa29.34■■■□□ 2.29
NDEL1-209ENST00000580738 ADAMTS2O95450 1211 aa29.34■■■□□ 2.29
NDEL1-209ENST00000580738 NGLY1Q96IV0 654 aa29.32■■■□□ 2.28
NDEL1-209ENST00000580738 SPHKAPQ2M3C7 1700 aa29.31■■■□□ 2.28
NDEL1-209ENST00000580738 NALCNQ8IZF0 1738 aa29.31■■■□□ 2.28
NDEL1-209ENST00000580738 C1orf167Q5SNV9 1468 aa29.29■■■□□ 2.28
NDEL1-209ENST00000580738 NEXMIFQ5QGS0 1516 aa29.27■■■□□ 2.28
NDEL1-209ENST00000580738 ORAI2Q96SN7 254 aa29.26■■■□□ 2.27
NDEL1-209ENST00000580738 CLTCL1P53675 1640 aa29.24■■■□□ 2.27
NDEL1-209ENST00000580738 SOS2Q07890 1332 aaPredicted RBP29.23■■■□□ 2.27
NDEL1-209ENST00000580738 USP21Q9UK80 565 aa29.22■■■□□ 2.27
NDEL1-209ENST00000580738 ROBO2Q9HCK4 1378 aa29.22■■■□□ 2.27
NDEL1-209ENST00000580738 PPARGC1BQ86YN6 1023 aaKnown RBP29.2■■■□□ 2.26
NDEL1-209ENST00000580738 LAMC1P11047 1609 aa29.2■■■□□ 2.26
NDEL1-209ENST00000580738 ATAD2Q6PL18 1390 aa29.18■■■□□ 2.26
NDEL1-209ENST00000580738 PTCH1Q13635 1447 aa29.18■■■□□ 2.26
NDEL1-209ENST00000580738 FNBP4Q8N3X1 1017 aaPredicted RBP29.17■■■□□ 2.26
NDEL1-209ENST00000580738 TRPC5Q9UL62 973 aaPredicted RBP29.17■■■□□ 2.26
NDEL1-209ENST00000580738 VGFO15240 615 aaPredicted RBP29.13■■■□□ 2.25
NDEL1-209ENST00000580738 ATRNO75882 1429 aa29.11■■■□□ 2.25
NDEL1-209ENST00000580738 KIF1BO60333 1816 aa29.09■■■□□ 2.25
NDEL1-209ENST00000580738 PRAG1Q86YV5 1406 aa29.07■■■□□ 2.24
NDEL1-209ENST00000580738 EP400Q96L91 3159 aa29.07■■■□□ 2.24
NDEL1-209ENST00000580738 COL22A1Q8NFW1 1626 aaPredicted RBP29.05■■■□□ 2.24
NDEL1-209ENST00000580738 MYOM2P54296 1465 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms