RNA–Protein interactions for RNA: ENST00000578321.1

SPECC1-212, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-212ENST00000578321 PROSER2Q86WR7 435 aaPredicted RBP29.76■■■□□ 2.35
SPECC1-212ENST00000578321 GCC2Q8IWJ2 1684 aa29.75■■■□□ 2.35
SPECC1-212ENST00000578321 NUP155O75694 1391 aa29.75■■■□□ 2.35
SPECC1-212ENST00000578321 TMEM94Q12767 1356 aa29.75■■■□□ 2.35
SPECC1-212ENST00000578321 MED1Q15648 1581 aaPredicted RBP29.73■■■□□ 2.35
SPECC1-212ENST00000578321 RIMS2Q9UQ26 1411 aa29.73■■■□□ 2.35
SPECC1-212ENST00000578321 RBM33Q96EV2 1170 aaKnown RBP29.72■■■□□ 2.35
SPECC1-212ENST00000578321 XIRP1Q702N8 1843 aaKnown RBP29.72■■■□□ 2.35
SPECC1-212ENST00000578321 ZFYVE9O95405 1425 aa29.71■■■□□ 2.35
SPECC1-212ENST00000578321 PLEKHG1Q9ULL1 1385 aa29.7■■■□□ 2.35
SPECC1-212ENST00000578321 TMEM131LA2VDJ0 1609 aa29.69■■■□□ 2.34
SPECC1-212ENST00000578321 RRBP1Q9P2E9 1410 aaKnown RBP29.69■■■□□ 2.34
SPECC1-212ENST00000578321 E9PCH4 1651 aa29.69■■■□□ 2.34
SPECC1-212ENST00000578321 IQGAP3Q86VI3 1631 aa29.68■■■□□ 2.34
SPECC1-212ENST00000578321 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.68■■■□□ 2.34
SPECC1-212ENST00000578321 MYO5BQ9ULV0 1848 aa29.68■■■□□ 2.34
SPECC1-212ENST00000578321 NUTM2DQ5VT03 806 aaPredicted RBP29.65■■■□□ 2.34
SPECC1-212ENST00000578321 PHF23Q9BUL5 403 aaPredicted RBP29.65■■■□□ 2.34
SPECC1-212ENST00000578321 FAM135BQ49AJ0 1406 aa29.63■■■□□ 2.33
SPECC1-212ENST00000578321 NKTRP30414 1462 aaKnown RBP29.63■■■□□ 2.33
SPECC1-212ENST00000578321 TBX22Q9Y458 520 aa29.63■■■□□ 2.33
SPECC1-212ENST00000578321 NWD1Q149M9 1564 aa29.61■■■□□ 2.33
SPECC1-212ENST00000578321 MSH6P52701 1360 aa29.58■■■□□ 2.33
SPECC1-212ENST00000578321 CHD2O14647 1828 aaKnown RBP29.54■■■□□ 2.32
SPECC1-212ENST00000578321 ADAMTS13Q76LX8 1427 aa29.53■■■□□ 2.32
SPECC1-212ENST00000578321 SLAIN2Q9P270 581 aa29.52■■■□□ 2.32
SPECC1-212ENST00000578321 C14orf37Q86TY3 774 aa29.5■■■□□ 2.31
SPECC1-212ENST00000578321 ROBO1Q9Y6N7 1651 aa29.48■■■□□ 2.31
SPECC1-212ENST00000578321 ZNF326Q5BKZ1 582 aaKnown RBP29.48■■■□□ 2.31
SPECC1-212ENST00000578321 PIK3R4Q99570 1358 aa29.47■■■□□ 2.31
SPECC1-212ENST00000578321 DIP2AQ14689 1571 aa29.46■■■□□ 2.31
SPECC1-212ENST00000578321 NCOA3Q9Y6Q9 1424 aa29.45■■■□□ 2.31
SPECC1-212ENST00000578321 NAIPQ13075 1403 aa29.45■■■□□ 2.3
SPECC1-212ENST00000578321 AMOTL2Q9Y2J4 779 aa29.44■■■□□ 2.3
SPECC1-212ENST00000578321 SPHKAPQ2M3C7 1700 aa29.43■■■□□ 2.3
SPECC1-212ENST00000578321 TRIM52Q96A61 297 aa29.41■■■□□ 2.3
SPECC1-212ENST00000578321 TRPM2O94759 1503 aa29.4■■■□□ 2.3
SPECC1-212ENST00000578321 C19orf44Q9H6X5 657 aa29.4■■■□□ 2.3
SPECC1-212ENST00000578321 CADPS2Q86UW7 1296 aa29.39■■■□□ 2.3
SPECC1-212ENST00000578321 RGS17Q9UGC6 210 aaPredicted RBP29.39■■■□□ 2.3
SPECC1-212ENST00000578321 ATF3P18847 181 aa29.38■■■□□ 2.29
SPECC1-212ENST00000578321 PTPRUQ92729 1446 aa29.37■■■□□ 2.29
SPECC1-212ENST00000578321 HFM1A2PYH4 1435 aa29.33■■■□□ 2.29
SPECC1-212ENST00000578321 CLTCL1P53675 1640 aa29.32■■■□□ 2.28
SPECC1-212ENST00000578321 PHLPP1O60346 1717 aa29.31■■■□□ 2.28
SPECC1-212ENST00000578321 SETBP1Q9Y6X0 1596 aa29.31■■■□□ 2.28
SPECC1-212ENST00000578321 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.31■■■□□ 2.28
SPECC1-212ENST00000578321 JCADQ9P266 1359 aa29.3■■■□□ 2.28
SPECC1-212ENST00000578321 SLC4A1APQ9BWU0 796 aaKnown RBP29.3■■■□□ 2.28
SPECC1-212ENST00000578321 NRXN3Q9Y4C0 1643 aa29.3■■■□□ 2.28
SPECC1-212ENST00000578321 METP08581 1390 aa29.29■■■□□ 2.28
SPECC1-212ENST00000578321 NEXMIFQ5QGS0 1516 aa29.26■■■□□ 2.27
SPECC1-212ENST00000578321 KIF1BO60333 1816 aa29.24■■■□□ 2.27
SPECC1-212ENST00000578321 VGFO15240 615 aaPredicted RBP29.23■■■□□ 2.27
SPECC1-212ENST00000578321 POTEAQ6S8J7 498 aa29.23■■■□□ 2.27
SPECC1-212ENST00000578321 XRN1Q8IZH2 1706 aaKnown RBP29.23■■■□□ 2.27
SPECC1-212ENST00000578321 COL16A1Q07092 1604 aaPredicted RBP29.21■■■□□ 2.27
SPECC1-212ENST00000578321 BRINP3Q76B58 766 aa29.21■■■□□ 2.27
SPECC1-212ENST00000578321 DCCP43146 1447 aa29.2■■■□□ 2.27
SPECC1-212ENST00000578321 RPGRIP1LQ68CZ1 1315 aa29.19■■■□□ 2.26
SPECC1-212ENST00000578321 SPATA31A6Q5VVP1 1343 aa29.17■■■□□ 2.26
SPECC1-212ENST00000578321 AHDC1Q5TGY3 1603 aaPredicted RBP29.16■■■□□ 2.26
SPECC1-212ENST00000578321 FOXD1Q16676 465 aa29.16■■■□□ 2.26
SPECC1-212ENST00000578321 MEX3CQ5U5Q3 659 aaKnown RBP29.13■■■□□ 2.25
SPECC1-212ENST00000578321 MST1RQ04912 1400 aa29.12■■■□□ 2.25
SPECC1-212ENST00000578321 ADGRL3Q9HAR2 1447 aa29.11■■■□□ 2.25
SPECC1-212ENST00000578321 ASXL1Q8IXJ9 1541 aa29.09■■■□□ 2.25
SPECC1-212ENST00000578321 LRP6O75581 1613 aa29.08■■■□□ 2.25
SPECC1-212ENST00000578321 MPHOSPH9Q99550 1183 aa29.07■■■□□ 2.24
SPECC1-212ENST00000578321 CCDC144AA2RUR9 1427 aa29.04■■■□□ 2.24
SPECC1-212ENST00000578321 PTCH1Q13635 1447 aa29.04■■■□□ 2.24
SPECC1-212ENST00000578321 ROBO2Q9HCK4 1378 aa29.04■■■□□ 2.24
SPECC1-212ENST00000578321 NUTM2BA6NNL0 878 aaPredicted RBP29.04■■■□□ 2.24
SPECC1-212ENST00000578321 NUTM2EB1AL46 878 aaPredicted RBP29.04■■■□□ 2.24
SPECC1-212ENST00000578321 RGL3Q3MIN7 710 aa29.04■■■□□ 2.24
SPECC1-212ENST00000578321 NUTM2AQ8IVF1 878 aaPredicted RBP29.04■■■□□ 2.24
SPECC1-212ENST00000578321 SHPRHQ149N8 1683 aa29.03■■■□□ 2.24
SPECC1-212ENST00000578321 LRRC59Q96AG4 307 aaKnown RBP29.03■■■□□ 2.24
SPECC1-212ENST00000578321 DDX17Q92841 729 aaKnown RBP29.02■■■□□ 2.24
SPECC1-212ENST00000578321 NALCNQ8IZF0 1738 aa29.02■■■□□ 2.24
SPECC1-212ENST00000578321 SETD5Q9C0A6 1442 aa29.02■■■□□ 2.24
SPECC1-212ENST00000578321 PPLO60437 1756 aa29.01■■■□□ 2.23
SPECC1-212ENST00000578321 ZNF772Q68DY9 489 aaPredicted RBP29.01■■■□□ 2.23
SPECC1-212ENST00000578321 SETD1AO15047 1707 aaKnown RBP29■■■□□ 2.23
SPECC1-212ENST00000578321 ADGRF5Q8IZF2 1346 aa28.99■■■□□ 2.23
SPECC1-212ENST00000578321 C1orf167Q5SNV9 1468 aa28.99■■■□□ 2.23
SPECC1-212ENST00000578321 NHSL1Q5SYE7 1610 aa28.97■■■□□ 2.23
SPECC1-212ENST00000578321 PRAG1Q86YV5 1406 aa28.95■■■□□ 2.23
SPECC1-212ENST00000578321 SPATA31E1Q6ZUB1 1445 aa28.94■■■□□ 2.22
SPECC1-212ENST00000578321 ORAI2Q96SN7 254 aa28.94■■■□□ 2.22
SPECC1-212ENST00000578321 ACIN1Q9UKV3 1341 aaKnown RBP28.94■■■□□ 2.22
SPECC1-212ENST00000578321 ANKRD30BQ9BXX2 1392 aa28.93■■■□□ 2.22
SPECC1-212ENST00000578321 RAB3GAP2Q9H2M9 1393 aa28.93■■■□□ 2.22
SPECC1-212ENST00000578321 TRIM26Q12899 539 aaPredicted RBP28.93■■■□□ 2.22
SPECC1-212ENST00000578321 STK26Q9P289 416 aa28.92■■■□□ 2.22
SPECC1-212ENST00000578321 PNPLA6Q8IY17 1366 aa28.9■■■□□ 2.22
SPECC1-212ENST00000578321 AFF2P51816 1311 aa28.88■■■□□ 2.21
SPECC1-212ENST00000578321 RXRBP28702 533 aa28.87■■■□□ 2.21
SPECC1-212ENST00000578321 TMEM132EQ6IEE7 984 aa28.86■■■□□ 2.21
SPECC1-212ENST00000578321 WAPLQ7Z5K2 1190 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms