RNA–Protein interactions for RNA: ENST00000578205.5

RHOT1-206, Transcript of ras homolog family member T1, humanhuman

TSL 1 (best)

Gene RHOT1, Length 2,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOT1-206ENST00000578205 ZNF516Q92618 1163 aa7.12□□□□□ -1.27
RHOT1-206ENST00000578205 CFAP44Q96MT7 982 aa7.12□□□□□ -1.27
RHOT1-206ENST00000578205 APLP1P51693 650 aa7.12□□□□□ -1.27
RHOT1-206ENST00000578205 PAXIP1Q6ZW49 1069 aaPredicted RBP7.12□□□□□ -1.27
RHOT1-206ENST00000578205 NECTIN2Q92692 538 aa7.11□□□□□ -1.27
RHOT1-206ENST00000578205 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.11□□□□□ -1.27
RHOT1-206ENST00000578205 V9GY48 417 aaPredicted RBP7.11□□□□□ -1.27
RHOT1-206ENST00000578205 CCDC88BA6NC98 1476 aa7.11□□□□□ -1.27
RHOT1-206ENST00000578205 LCE2BO14633 110 aa7.1□□□□□ -1.27
RHOT1-206ENST00000578205 NRG2O14511 850 aaPredicted RBP7.1□□□□□ -1.27
RHOT1-206ENST00000578205 SWT1Q5T5J6 900 aaKnown RBP7.08□□□□□ -1.28
RHOT1-206ENST00000578205 SLF2Q8IX21 1173 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 PADI6Q6TGC4 694 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 NKX2-3Q8TAU0 364 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 PEG3Q9GZU2 1588 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 GGCXP38435 758 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 COPS2P61201 443 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 TTC13Q8NBP0 860 aa7.08□□□□□ -1.28
RHOT1-206ENST00000578205 SLC4A3P48751 1232 aa7.07□□□□□ -1.28
RHOT1-206ENST00000578205 TOP2AP11388 1531 aaKnown RBP7.07□□□□□ -1.28
RHOT1-206ENST00000578205 HMGXB3Q12766 1538 aa7.07□□□□□ -1.28
RHOT1-206ENST00000578205 NPDC1Q9NQX5 325 aaPredicted RBP7.07□□□□□ -1.28
RHOT1-206ENST00000578205 PDZRN3Q9UPQ7 1066 aa7.05□□□□□ -1.28
RHOT1-206ENST00000578205 CADPSQ9ULU8 1353 aa7.05□□□□□ -1.28
RHOT1-206ENST00000578205 ERCC6Q03468 1493 aa7.04□□□□□ -1.28
RHOT1-206ENST00000578205 TMUB1Q9BVT8 246 aa7.03□□□□□ -1.28
RHOT1-206ENST00000578205 PRR14Q9BWN1 585 aa7.03□□□□□ -1.28
RHOT1-206ENST00000578205 ZPR1O75312 459 aa7.03□□□□□ -1.28
RHOT1-206ENST00000578205 EYA1Q99502 592 aa7.03□□□□□ -1.28
RHOT1-206ENST00000578205 PCDHB3Q9Y5E6 796 aa7.02□□□□□ -1.29
RHOT1-206ENST00000578205 TSHZ2Q9NRE2 1034 aa7.01□□□□□ -1.29
RHOT1-206ENST00000578205 ZNF787Q6DD87 383 aa6.99□□□□□ -1.29
RHOT1-206ENST00000578205 BLOC1S3Q6QNY0 202 aa6.99□□□□□ -1.29
RHOT1-206ENST00000578205 KDM2AQ9Y2K7 1162 aa6.98□□□□□ -1.29
RHOT1-206ENST00000578205 DNAJB2P25686 324 aa6.98□□□□□ -1.29
RHOT1-206ENST00000578205 MLLT3P42568 568 aaPredicted RBP6.98□□□□□ -1.29
RHOT1-206ENST00000578205 RNF223E7ERA6 249 aa6.97□□□□□ -1.29
RHOT1-206ENST00000578205 CFTRP13569 1480 aa6.97□□□□□ -1.29
RHOT1-206ENST00000578205 SLC19A1P41440 591 aa6.97□□□□□ -1.29
RHOT1-206ENST00000578205 RBM46Q8TBY0 533 aaKnown RBP6.97□□□□□ -1.29
RHOT1-206ENST00000578205 ARHGEF1Q92888 912 aaKnown RBP6.97□□□□□ -1.29
RHOT1-206ENST00000578205 PDS5BQ9NTI5 1447 aa6.97□□□□□ -1.29
RHOT1-206ENST00000578205 FANCD2Q9BXW9 1451 aa6.97□□□□□ -1.29
RHOT1-206ENST00000578205 FAM9AQ8IZU1 332 aaPredicted RBP6.97□□□□□ -1.29
RHOT1-206ENST00000578205 PTGDRQ13258 359 aa6.96□□□□□ -1.3
RHOT1-206ENST00000578205 TMEM134Q9H6X4 195 aa6.96□□□□□ -1.3
RHOT1-206ENST00000578205 TLL1O43897 1013 aa6.95□□□□□ -1.3
RHOT1-206ENST00000578205 KMT5BQ4FZB7 885 aa6.95□□□□□ -1.3
RHOT1-206ENST00000578205 TRIM67Q6ZTA4 783 aa6.94□□□□□ -1.3
RHOT1-206ENST00000578205 ADGRG1Q9Y653 693 aa6.94□□□□□ -1.3
RHOT1-206ENST00000578205 ABCC8Q09428 1581 aa6.94□□□□□ -1.3
RHOT1-206ENST00000578205 ACTN4O43707 911 aaKnown RBP6.94□□□□□ -1.3
RHOT1-206ENST00000578205 SPRYD7Q5W111 196 aa6.93□□□□□ -1.3
RHOT1-206ENST00000578205 ANKLE1Q8NAG6 615 aa6.93□□□□□ -1.3
RHOT1-206ENST00000578205 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
RHOT1-206ENST00000578205 RCCD1A6NED2 376 aa6.93□□□□□ -1.3
RHOT1-206ENST00000578205 PKDCCQ504Y2 493 aa6.93□□□□□ -1.3
RHOT1-206ENST00000578205 NUTM2FA1L443 756 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 S1PR4O95977 384 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 CFHP08603 1231 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 ZNF598Q86UK7 904 aaKnown RBP6.92□□□□□ -1.3
RHOT1-206ENST00000578205 KCNV2Q8TDN2 545 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 KIF21AQ7Z4S6 1674 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 CEP164Q9UPV0 1460 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 LAMC3Q9Y6N6 1575 aa6.92□□□□□ -1.3
RHOT1-206ENST00000578205 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
RHOT1-206ENST00000578205 FAM161AQ3B820 660 aa6.91□□□□□ -1.3
RHOT1-206ENST00000578205 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
RHOT1-206ENST00000578205 VSIG10Q8N0Z9 540 aa6.91□□□□□ -1.3
RHOT1-206ENST00000578205 DGAT1O75907 488 aa6.9□□□□□ -1.3
RHOT1-206ENST00000578205 PRR20EP86478 221 aa6.9□□□□□ -1.3
RHOT1-206ENST00000578205 PRR20CP86479 221 aa6.9□□□□□ -1.3
RHOT1-206ENST00000578205 PRR20DP86480 221 aa6.9□□□□□ -1.3
RHOT1-206ENST00000578205 PRR20BP86481 221 aa6.9□□□□□ -1.3
RHOT1-206ENST00000578205 PRR20AP86496 221 aa6.9□□□□□ -1.3
RHOT1-206ENST00000578205 NR1I2O75469 434 aa6.9□□□□□ -1.31
RHOT1-206ENST00000578205 ZNF697Q5TEC3 545 aa6.9□□□□□ -1.31
RHOT1-206ENST00000578205 LIAT1Q6ZQX7 453 aa6.9□□□□□ -1.31
RHOT1-206ENST00000578205 ADH1BP00325 375 aa6.89□□□□□ -1.31
RHOT1-206ENST00000578205 SLC10A3P09131 477 aa6.89□□□□□ -1.31
RHOT1-206ENST00000578205 MYT1Q01538 1121 aa6.89□□□□□ -1.31
RHOT1-206ENST00000578205 URB2Q14146 1524 aaKnown RBP6.89□□□□□ -1.31
RHOT1-206ENST00000578205 TDRD9Q8NDG6 1382 aaKnown RBP6.88□□□□□ -1.31
RHOT1-206ENST00000578205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.88□□□□□ -1.31
RHOT1-206ENST00000578205 RAD54L2Q9Y4B4 1467 aa6.88□□□□□ -1.31
RHOT1-206ENST00000578205 FCHSD2O94868 740 aa6.88□□□□□ -1.31
RHOT1-206ENST00000578205 FAM187AA6NFU0 413 aa6.87□□□□□ -1.31
RHOT1-206ENST00000578205 TNFRSF10AO00220 468 aa6.87□□□□□ -1.31
RHOT1-206ENST00000578205 SLC6A16Q9GZN6 736 aa6.87□□□□□ -1.31
RHOT1-206ENST00000578205 WRNQ14191 1432 aaPredicted RBP eCLIP6.87□□□□□ -1.31
RHOT1-206ENST00000578205 GDF9O60383 454 aa6.86□□□□□ -1.31
RHOT1-206ENST00000578205 MRC2Q9UBG0 1479 aa6.86□□□□□ -1.31
RHOT1-206ENST00000578205 OATP04181 439 aa6.86□□□□□ -1.31
RHOT1-206ENST00000578205 SCUBE3Q8IX30 993 aa6.86□□□□□ -1.31
RHOT1-206ENST00000578205 RSPH4AQ5TD94 716 aa6.85□□□□□ -1.31
RHOT1-206ENST00000578205 PXYLP1Q8TE99 480 aa6.85□□□□□ -1.31
RHOT1-206ENST00000578205 RANGAP1P46060 587 aaPredicted RBP6.85□□□□□ -1.31
RHOT1-206ENST00000578205 TOPBP1Q92547 1522 aa6.85□□□□□ -1.31
RHOT1-206ENST00000578205 AQRO60306 1485 aaKnown RBP eCLIP6.84□□□□□ -1.312e-6■■□□□ 13.5
RHOT1-206ENST00000578205 CUX1P39880 1505 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms