RNA–Protein interactions for RNA: ENST00000578018.5

CDK5RAP3-206, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-206ENST00000578018 ITGAEP38570 1179 aa25.5■■□□□ 1.67
CDK5RAP3-206ENST00000578018 SLC26A8Q96RN1 970 aa25.49■■□□□ 1.67
CDK5RAP3-206ENST00000578018 RIMS2Q9UQ26 1411 aa25.47■■□□□ 1.67
CDK5RAP3-206ENST00000578018 NUP155O75694 1391 aa25.47■■□□□ 1.67
CDK5RAP3-206ENST00000578018 KCNA6P17658 529 aa25.47■■□□□ 1.67
CDK5RAP3-206ENST00000578018 NKTRP30414 1462 aaKnown RBP25.47■■□□□ 1.67
CDK5RAP3-206ENST00000578018 PLEKHG1Q9ULL1 1385 aa25.46■■□□□ 1.67
CDK5RAP3-206ENST00000578018 TMEM94Q12767 1356 aa25.45■■□□□ 1.67
CDK5RAP3-206ENST00000578018 RRBP1Q9P2E9 1410 aaKnown RBP25.45■■□□□ 1.66
CDK5RAP3-206ENST00000578018 SOCS7O14512 581 aa25.42■■□□□ 1.66
CDK5RAP3-206ENST00000578018 CHD2O14647 1828 aaKnown RBP25.42■■□□□ 1.66
CDK5RAP3-206ENST00000578018 SPHKAPQ2M3C7 1700 aa25.4■■□□□ 1.66
CDK5RAP3-206ENST00000578018 PPP1R15AO75807 674 aaPredicted RBP25.4■■□□□ 1.66
CDK5RAP3-206ENST00000578018 BCANQ96GW7 911 aa25.39■■□□□ 1.66
CDK5RAP3-206ENST00000578018 CHGAP10645 457 aaKnown RBP25.37■■□□□ 1.65
CDK5RAP3-206ENST00000578018 HDGFP51858 240 aaKnown RBP25.37■■□□□ 1.65
CDK5RAP3-206ENST00000578018 SENP3Q9H4L4 574 aaPredicted RBP25.37■■□□□ 1.65
CDK5RAP3-206ENST00000578018 PROSER2Q86WR7 435 aaPredicted RBP25.36■■□□□ 1.65
CDK5RAP3-206ENST00000578018 DIP2AQ14689 1571 aa25.35■■□□□ 1.65
CDK5RAP3-206ENST00000578018 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.35■■□□□ 1.65
CDK5RAP3-206ENST00000578018 FAM135BQ49AJ0 1406 aa25.35■■□□□ 1.65
CDK5RAP3-206ENST00000578018 ADAMTS13Q76LX8 1427 aa25.35■■□□□ 1.65
CDK5RAP3-206ENST00000578018 RBM33Q96EV2 1170 aaKnown RBP25.34■■□□□ 1.65
CDK5RAP3-206ENST00000578018 ROBO1Q9Y6N7 1651 aa25.32■■□□□ 1.64
CDK5RAP3-206ENST00000578018 NAIPQ13075 1403 aa25.32■■□□□ 1.64
CDK5RAP3-206ENST00000578018 TBX22Q9Y458 520 aa25.31■■□□□ 1.64
CDK5RAP3-206ENST00000578018 NUTM2DQ5VT03 806 aaPredicted RBP25.3■■□□□ 1.64
CDK5RAP3-206ENST00000578018 MSH6P52701 1360 aa25.29■■□□□ 1.64
CDK5RAP3-206ENST00000578018 TRPM2O94759 1503 aa25.27■■□□□ 1.64
CDK5RAP3-206ENST00000578018 CLTCL1P53675 1640 aa25.26■■□□□ 1.63
CDK5RAP3-206ENST00000578018 NRXN3Q9Y4C0 1643 aa25.26■■□□□ 1.63
CDK5RAP3-206ENST00000578018 PIK3R4Q99570 1358 aa25.26■■□□□ 1.63
CDK5RAP3-206ENST00000578018 HFM1A2PYH4 1435 aa25.25■■□□□ 1.63
CDK5RAP3-206ENST00000578018 SETBP1Q9Y6X0 1596 aa25.23■■□□□ 1.63
CDK5RAP3-206ENST00000578018 NCOA3Q9Y6Q9 1424 aa25.23■■□□□ 1.63
CDK5RAP3-206ENST00000578018 PHF23Q9BUL5 403 aaPredicted RBP25.22■■□□□ 1.63
CDK5RAP3-206ENST00000578018 XRN1Q8IZH2 1706 aaKnown RBP25.2■■□□□ 1.62
CDK5RAP3-206ENST00000578018 PTPRUQ92729 1446 aa25.2■■□□□ 1.62
CDK5RAP3-206ENST00000578018 KIF1BO60333 1816 aa25.19■■□□□ 1.62
CDK5RAP3-206ENST00000578018 NEXMIFQ5QGS0 1516 aa25.19■■□□□ 1.62
CDK5RAP3-206ENST00000578018 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.19■■□□□ 1.62
CDK5RAP3-206ENST00000578018 SLAIN2Q9P270 581 aa25.18■■□□□ 1.62
CDK5RAP3-206ENST00000578018 PHLPP1O60346 1717 aa25.17■■□□□ 1.62
CDK5RAP3-206ENST00000578018 ZNF326Q5BKZ1 582 aaKnown RBP25.15■■□□□ 1.62
CDK5RAP3-206ENST00000578018 AMOTL2Q9Y2J4 779 aa25.13■■□□□ 1.61
CDK5RAP3-206ENST00000578018 C14orf37Q86TY3 774 aa25.12■■□□□ 1.61
CDK5RAP3-206ENST00000578018 COL16A1Q07092 1604 aaPredicted RBP25.12■■□□□ 1.61
CDK5RAP3-206ENST00000578018 TRIM52Q96A61 297 aa25.1■■□□□ 1.61
CDK5RAP3-206ENST00000578018 METP08581 1390 aa25.09■■□□□ 1.61
CDK5RAP3-206ENST00000578018 C19orf44Q9H6X5 657 aa25.09■■□□□ 1.61
CDK5RAP3-206ENST00000578018 CADPS2Q86UW7 1296 aa25.08■■□□□ 1.61
CDK5RAP3-206ENST00000578018 RGS17Q9UGC6 210 aaPredicted RBP25.08■■□□□ 1.61
CDK5RAP3-206ENST00000578018 DCCP43146 1447 aa25.07■■□□□ 1.6
CDK5RAP3-206ENST00000578018 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
CDK5RAP3-206ENST00000578018 SETD1AO15047 1707 aaKnown RBP25.06■■□□□ 1.6
CDK5RAP3-206ENST00000578018 ATF3P18847 181 aa25.05■■□□□ 1.6
CDK5RAP3-206ENST00000578018 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
CDK5RAP3-206ENST00000578018 JCADQ9P266 1359 aa25.05■■□□□ 1.6
CDK5RAP3-206ENST00000578018 PPLO60437 1756 aa25.03■■□□□ 1.6
CDK5RAP3-206ENST00000578018 NALCNQ8IZF0 1738 aa25.02■■□□□ 1.6
CDK5RAP3-206ENST00000578018 ADGRL3Q9HAR2 1447 aa24.99■■□□□ 1.59
CDK5RAP3-206ENST00000578018 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
CDK5RAP3-206ENST00000578018 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
CDK5RAP3-206ENST00000578018 MST1RQ04912 1400 aa24.98■■□□□ 1.59
CDK5RAP3-206ENST00000578018 PTCH1Q13635 1447 aa24.96■■□□□ 1.59
CDK5RAP3-206ENST00000578018 RPGRIP1LQ68CZ1 1315 aa24.96■■□□□ 1.59
CDK5RAP3-206ENST00000578018 VGFO15240 615 aaPredicted RBP24.96■■□□□ 1.59
CDK5RAP3-206ENST00000578018 BRINP3Q76B58 766 aa24.96■■□□□ 1.59
CDK5RAP3-206ENST00000578018 NHSL1Q5SYE7 1610 aa24.95■■□□□ 1.58
CDK5RAP3-206ENST00000578018 FOXD1Q16676 465 aa24.95■■□□□ 1.58
CDK5RAP3-206ENST00000578018 PRAG1Q86YV5 1406 aa24.95■■□□□ 1.58
CDK5RAP3-206ENST00000578018 LRP6O75581 1613 aa24.94■■□□□ 1.58
CDK5RAP3-206ENST00000578018 POTEAQ6S8J7 498 aa24.92■■□□□ 1.58
CDK5RAP3-206ENST00000578018 CCDC144AA2RUR9 1427 aa24.92■■□□□ 1.58
CDK5RAP3-206ENST00000578018 IFT172Q9UG01 1749 aa24.91■■□□□ 1.58
CDK5RAP3-206ENST00000578018 SPATA31A6Q5VVP1 1343 aa24.9■■□□□ 1.58
CDK5RAP3-206ENST00000578018 ROBO2Q9HCK4 1378 aa24.9■■□□□ 1.58
CDK5RAP3-206ENST00000578018 SPATA31E1Q6ZUB1 1445 aa24.89■■□□□ 1.58
CDK5RAP3-206ENST00000578018 MPHOSPH9Q99550 1183 aa24.88■■□□□ 1.57
CDK5RAP3-206ENST00000578018 SETD5Q9C0A6 1442 aa24.86■■□□□ 1.57
CDK5RAP3-206ENST00000578018 C1orf167Q5SNV9 1468 aa24.83■■□□□ 1.57
CDK5RAP3-206ENST00000578018 LAMC1P11047 1609 aa24.83■■□□□ 1.56
CDK5RAP3-206ENST00000578018 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
CDK5RAP3-206ENST00000578018 ANKRD30BQ9BXX2 1392 aa24.8■■□□□ 1.56
CDK5RAP3-206ENST00000578018 MEX3CQ5U5Q3 659 aaKnown RBP24.79■■□□□ 1.56
CDK5RAP3-206ENST00000578018 CDC42BPGQ6DT37 1551 aa24.79■■□□□ 1.56
CDK5RAP3-206ENST00000578018 RGL3Q3MIN7 710 aa24.78■■□□□ 1.56
CDK5RAP3-206ENST00000578018 ACIN1Q9UKV3 1341 aaKnown RBP24.78■■□□□ 1.56
CDK5RAP3-206ENST00000578018 KNDC1Q76NI1 1749 aa24.78■■□□□ 1.56
CDK5RAP3-206ENST00000578018 TECPR2O15040 1411 aa24.78■■□□□ 1.56
CDK5RAP3-206ENST00000578018 PIK3C2GO75747 1445 aa24.78■■□□□ 1.56
CDK5RAP3-206ENST00000578018 DDX17Q92841 729 aaKnown RBP24.77■■□□□ 1.56
CDK5RAP3-206ENST00000578018 LRRC59Q96AG4 307 aaKnown RBP24.75■■□□□ 1.55
CDK5RAP3-206ENST00000578018 PNPLA6Q8IY17 1366 aa24.75■■□□□ 1.55
CDK5RAP3-206ENST00000578018 RAB3GAP2Q9H2M9 1393 aa24.73■■□□□ 1.55
CDK5RAP3-206ENST00000578018 NUTM2BA6NNL0 878 aaPredicted RBP24.73■■□□□ 1.55
CDK5RAP3-206ENST00000578018 NUTM2EB1AL46 878 aaPredicted RBP24.73■■□□□ 1.55
CDK5RAP3-206ENST00000578018 ZNF772Q68DY9 489 aaPredicted RBP24.73■■□□□ 1.55
CDK5RAP3-206ENST00000578018 NUTM2AQ8IVF1 878 aaPredicted RBP24.73■■□□□ 1.55
CDK5RAP3-206ENST00000578018 LRPPRCP42704 1394 aaKnown RBP24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms