RNA–Protein interactions for RNA: ENST00000575934.5

ABR-233, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 3

Gene ABR, Length 689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-233ENST00000575934 NWD1Q149M9 1564 aa31.21■■■□□ 2.59
ABR-233ENST00000575934 ILDR2Q71H61 639 aa31.2■■■□□ 2.59
ABR-233ENST00000575934 RIMS2Q9UQ26 1411 aa31.19■■■□□ 2.58
ABR-233ENST00000575934 SLC26A8Q96RN1 970 aa31.18■■■□□ 2.58
ABR-233ENST00000575934 KCNA6P17658 529 aa31.17■■■□□ 2.58
ABR-233ENST00000575934 PLEKHG1Q9ULL1 1385 aa31.17■■■□□ 2.58
ABR-233ENST00000575934 SPHKAPQ2M3C7 1700 aa31.15■■■□□ 2.58
ABR-233ENST00000575934 CHD2O14647 1828 aaKnown RBP31.15■■■□□ 2.58
ABR-233ENST00000575934 NKTRP30414 1462 aaKnown RBP31.14■■■□□ 2.58
ABR-233ENST00000575934 HDGFP51858 240 aaKnown RBP31.11■■■□□ 2.57
ABR-233ENST00000575934 TMEM94Q12767 1356 aa31.11■■■□□ 2.57
ABR-233ENST00000575934 MED1Q15648 1581 aaPredicted RBP31.11■■■□□ 2.57
ABR-233ENST00000575934 CHGAP10645 457 aaKnown RBP31.08■■■□□ 2.57
ABR-233ENST00000575934 PPP1R15AO75807 674 aaPredicted RBP31.07■■■□□ 2.56
ABR-233ENST00000575934 BCANQ96GW7 911 aa31.07■■■□□ 2.56
ABR-233ENST00000575934 NAIPQ13075 1403 aa31.07■■■□□ 2.56
ABR-233ENST00000575934 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.06■■■□□ 2.56
ABR-233ENST00000575934 DIP2AQ14689 1571 aa31.05■■■□□ 2.56
ABR-233ENST00000575934 PROSER2Q86WR7 435 aaPredicted RBP31.04■■■□□ 2.56
ABR-233ENST00000575934 ADAMTS13Q76LX8 1427 aa31.02■■■□□ 2.56
ABR-233ENST00000575934 SENP3Q9H4L4 574 aaPredicted RBP31.02■■■□□ 2.56
ABR-233ENST00000575934 TBX22Q9Y458 520 aa31.01■■■□□ 2.55
ABR-233ENST00000575934 FAM135BQ49AJ0 1406 aa30.99■■■□□ 2.55
ABR-233ENST00000575934 RBM33Q96EV2 1170 aaKnown RBP30.98■■■□□ 2.55
ABR-233ENST00000575934 SOCS7O14512 581 aa30.97■■■□□ 2.55
ABR-233ENST00000575934 NUTM2DQ5VT03 806 aaPredicted RBP30.97■■■□□ 2.55
ABR-233ENST00000575934 HFM1A2PYH4 1435 aa30.97■■■□□ 2.55
ABR-233ENST00000575934 ROBO1Q9Y6N7 1651 aa30.97■■■□□ 2.55
ABR-233ENST00000575934 CLTCL1P53675 1640 aa30.96■■■□□ 2.55
ABR-233ENST00000575934 TRPM2O94759 1503 aa30.96■■■□□ 2.55
ABR-233ENST00000575934 PIK3R4Q99570 1358 aa30.94■■■□□ 2.54
ABR-233ENST00000575934 NRXN3Q9Y4C0 1643 aa30.94■■■□□ 2.54
ABR-233ENST00000575934 KIF1BO60333 1816 aa30.94■■■□□ 2.54
ABR-233ENST00000575934 MSH6P52701 1360 aa30.93■■■□□ 2.54
ABR-233ENST00000575934 NCOA3Q9Y6Q9 1424 aa30.9■■■□□ 2.54
ABR-233ENST00000575934 SETBP1Q9Y6X0 1596 aa30.9■■■□□ 2.54
ABR-233ENST00000575934 NEXMIFQ5QGS0 1516 aa30.86■■■□□ 2.53
ABR-233ENST00000575934 XRN1Q8IZH2 1706 aaKnown RBP30.84■■■□□ 2.53
ABR-233ENST00000575934 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.84■■■□□ 2.53
ABR-233ENST00000575934 PTPRUQ92729 1446 aa30.83■■■□□ 2.53
ABR-233ENST00000575934 ZNF326Q5BKZ1 582 aaKnown RBP30.82■■■□□ 2.52
ABR-233ENST00000575934 TRIM52Q96A61 297 aa30.8■■■□□ 2.52
ABR-233ENST00000575934 SLAIN2Q9P270 581 aa30.79■■■□□ 2.52
ABR-233ENST00000575934 PHLPP1O60346 1717 aa30.78■■■□□ 2.52
ABR-233ENST00000575934 PHF23Q9BUL5 403 aaPredicted RBP30.78■■■□□ 2.52
ABR-233ENST00000575934 AMOTL2Q9Y2J4 779 aa30.77■■■□□ 2.52
ABR-233ENST00000575934 SLC4A1APQ9BWU0 796 aaKnown RBP30.74■■■□□ 2.51
ABR-233ENST00000575934 C14orf37Q86TY3 774 aa30.73■■■□□ 2.51
ABR-233ENST00000575934 C19orf44Q9H6X5 657 aa30.72■■■□□ 2.51
ABR-233ENST00000575934 METP08581 1390 aa30.71■■■□□ 2.51
ABR-233ENST00000575934 SETD1AO15047 1707 aaKnown RBP30.71■■■□□ 2.51
ABR-233ENST00000575934 PPLO60437 1756 aa30.71■■■□□ 2.51
ABR-233ENST00000575934 COL16A1Q07092 1604 aaPredicted RBP30.7■■■□□ 2.51
ABR-233ENST00000575934 CADPS2Q86UW7 1296 aa30.7■■■□□ 2.51
ABR-233ENST00000575934 DCCP43146 1447 aa30.67■■■□□ 2.5
ABR-233ENST00000575934 AHDC1Q5TGY3 1603 aaPredicted RBP30.65■■■□□ 2.5
ABR-233ENST00000575934 ATF3P18847 181 aa30.65■■■□□ 2.5
ABR-233ENST00000575934 RPGRIP1LQ68CZ1 1315 aa30.62■■■□□ 2.49
ABR-233ENST00000575934 NALCNQ8IZF0 1738 aa30.61■■■□□ 2.49
ABR-233ENST00000575934 VGFO15240 615 aaPredicted RBP30.61■■■□□ 2.49
ABR-233ENST00000575934 RGS17Q9UGC6 210 aaPredicted RBP30.61■■■□□ 2.49
ABR-233ENST00000575934 JCADQ9P266 1359 aa30.6■■■□□ 2.49
ABR-233ENST00000575934 FOXD1Q16676 465 aa30.58■■■□□ 2.49
ABR-233ENST00000575934 ADGRL3Q9HAR2 1447 aa30.57■■■□□ 2.48
ABR-233ENST00000575934 IFT172Q9UG01 1749 aa30.56■■■□□ 2.48
ABR-233ENST00000575934 MST1RQ04912 1400 aa30.56■■■□□ 2.48
ABR-233ENST00000575934 PTCH1Q13635 1447 aa30.56■■■□□ 2.48
ABR-233ENST00000575934 SHPRHQ149N8 1683 aa30.55■■■□□ 2.48
ABR-233ENST00000575934 CCDC144AA2RUR9 1427 aa30.55■■■□□ 2.48
ABR-233ENST00000575934 PRAG1Q86YV5 1406 aa30.55■■■□□ 2.48
ABR-233ENST00000575934 MPHOSPH9Q99550 1183 aa30.54■■■□□ 2.48
ABR-233ENST00000575934 ASXL1Q8IXJ9 1541 aa30.53■■■□□ 2.48
ABR-233ENST00000575934 BRINP3Q76B58 766 aa30.53■■■□□ 2.48
ABR-233ENST00000575934 NHSL1Q5SYE7 1610 aa30.53■■■□□ 2.48
ABR-233ENST00000575934 SPATA31E1Q6ZUB1 1445 aa30.51■■■□□ 2.47
ABR-233ENST00000575934 ACIN1Q9UKV3 1341 aaKnown RBP30.47■■■□□ 2.47
ABR-233ENST00000575934 SETD5Q9C0A6 1442 aa30.47■■■□□ 2.47
ABR-233ENST00000575934 ROBO2Q9HCK4 1378 aa30.47■■■□□ 2.47
ABR-233ENST00000575934 SPATA31A6Q5VVP1 1343 aa30.46■■■□□ 2.47
ABR-233ENST00000575934 LRP6O75581 1613 aa30.45■■■□□ 2.47
ABR-233ENST00000575934 POTEAQ6S8J7 498 aa30.43■■■□□ 2.46
ABR-233ENST00000575934 ADGRF5Q8IZF2 1346 aa30.42■■■□□ 2.46
ABR-233ENST00000575934 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
ABR-233ENST00000575934 RGL3Q3MIN7 710 aa30.39■■■□□ 2.46
ABR-233ENST00000575934 LAMC1P11047 1609 aa30.39■■■□□ 2.46
ABR-233ENST00000575934 C1orf167Q5SNV9 1468 aa30.38■■■□□ 2.45
ABR-233ENST00000575934 KNDC1Q76NI1 1749 aa30.37■■■□□ 2.45
ABR-233ENST00000575934 RAB3GAP2Q9H2M9 1393 aa30.36■■■□□ 2.45
ABR-233ENST00000575934 PIK3C2GO75747 1445 aa30.35■■■□□ 2.45
ABR-233ENST00000575934 CDC42BPGQ6DT37 1551 aa30.33■■■□□ 2.45
ABR-233ENST00000575934 TECPR2O15040 1411 aa30.33■■■□□ 2.45
ABR-233ENST00000575934 DDX17Q92841 729 aaKnown RBP30.29■■■□□ 2.44
ABR-233ENST00000575934 LRRC59Q96AG4 307 aaKnown RBP30.29■■■□□ 2.44
ABR-233ENST00000575934 LRPPRCP42704 1394 aaKnown RBP30.28■■■□□ 2.44
ABR-233ENST00000575934 MEX3CQ5U5Q3 659 aaKnown RBP30.28■■■□□ 2.44
ABR-233ENST00000575934 NRXN1Q9ULB1 1477 aa30.27■■■□□ 2.44
ABR-233ENST00000575934 MYOM2P54296 1465 aa30.26■■■□□ 2.44
ABR-233ENST00000575934 PNPLA6Q8IY17 1366 aa30.26■■■□□ 2.43
ABR-233ENST00000575934 ABCC11Q96J66 1382 aa30.25■■■□□ 2.43
ABR-233ENST00000575934 ORAI2Q96SN7 254 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms