RNA–Protein interactions for RNA: ENST00000574999.1

ATP2A3-214, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 3

Gene ATP2A3, Length 776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-214ENST00000574999 RIMS2Q9UQ26 1411 aa20.01■□□□□ 0.79
ATP2A3-214ENST00000574999 CHGAP10645 457 aaKnown RBP20■□□□□ 0.79
ATP2A3-214ENST00000574999 HDGFP51858 240 aaKnown RBP20■□□□□ 0.79
ATP2A3-214ENST00000574999 ILDR2Q71H61 639 aa20■□□□□ 0.79
ATP2A3-214ENST00000574999 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
ATP2A3-214ENST00000574999 PLEKHG1Q9ULL1 1385 aa19.98■□□□□ 0.79
ATP2A3-214ENST00000574999 BCANQ96GW7 911 aa19.98■□□□□ 0.79
ATP2A3-214ENST00000574999 NAIPQ13075 1403 aa19.98■□□□□ 0.79
ATP2A3-214ENST00000574999 MYO5BQ9ULV0 1848 aa19.97■□□□□ 0.79
ATP2A3-214ENST00000574999 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.96■□□□□ 0.79
ATP2A3-214ENST00000574999 TMEM94Q12767 1356 aa19.95■□□□□ 0.79
ATP2A3-214ENST00000574999 XIRP1Q702N8 1843 aaKnown RBP19.95■□□□□ 0.78
ATP2A3-214ENST00000574999 PPP1R15AO75807 674 aaPredicted RBP19.95■□□□□ 0.78
ATP2A3-214ENST00000574999 NUTM2DQ5VT03 806 aaPredicted RBP19.95■□□□□ 0.78
ATP2A3-214ENST00000574999 PROSER2Q86WR7 435 aaPredicted RBP19.95■□□□□ 0.78
ATP2A3-214ENST00000574999 RBM33Q96EV2 1170 aaKnown RBP19.95■□□□□ 0.78
ATP2A3-214ENST00000574999 TBX22Q9Y458 520 aa19.94■□□□□ 0.78
ATP2A3-214ENST00000574999 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
ATP2A3-214ENST00000574999 HFM1A2PYH4 1435 aa19.9■□□□□ 0.78
ATP2A3-214ENST00000574999 NKTRP30414 1462 aaKnown RBP19.89■□□□□ 0.77
ATP2A3-214ENST00000574999 ADAMTS13Q76LX8 1427 aa19.89■□□□□ 0.77
ATP2A3-214ENST00000574999 FAM135BQ49AJ0 1406 aa19.86■□□□□ 0.77
ATP2A3-214ENST00000574999 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
ATP2A3-214ENST00000574999 SPHKAPQ2M3C7 1700 aa19.85■□□□□ 0.77
ATP2A3-214ENST00000574999 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
ATP2A3-214ENST00000574999 PIK3R4Q99570 1358 aa19.83■□□□□ 0.76
ATP2A3-214ENST00000574999 ZNF326Q5BKZ1 582 aaKnown RBP19.82■□□□□ 0.76
ATP2A3-214ENST00000574999 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
ATP2A3-214ENST00000574999 MED1Q15648 1581 aaPredicted RBP19.82■□□□□ 0.76
ATP2A3-214ENST00000574999 TRPM2O94759 1503 aa19.81■□□□□ 0.76
ATP2A3-214ENST00000574999 SOCS7O14512 581 aa19.81■□□□□ 0.76
ATP2A3-214ENST00000574999 SLAIN2Q9P270 581 aa19.81■□□□□ 0.76
ATP2A3-214ENST00000574999 MSH6P52701 1360 aa19.81■□□□□ 0.76
ATP2A3-214ENST00000574999 CLTCL1P53675 1640 aa19.8■□□□□ 0.76
ATP2A3-214ENST00000574999 NCOA3Q9Y6Q9 1424 aa19.8■□□□□ 0.76
ATP2A3-214ENST00000574999 SLC4A1APQ9BWU0 796 aaKnown RBP19.8■□□□□ 0.76
ATP2A3-214ENST00000574999 AMOTL2Q9Y2J4 779 aa19.8■□□□□ 0.76
ATP2A3-214ENST00000574999 PTPRUQ92729 1446 aa19.79■□□□□ 0.76
ATP2A3-214ENST00000574999 SETBP1Q9Y6X0 1596 aa19.77■□□□□ 0.76
ATP2A3-214ENST00000574999 NRXN3Q9Y4C0 1643 aa19.76■□□□□ 0.75
ATP2A3-214ENST00000574999 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
ATP2A3-214ENST00000574999 METP08581 1390 aa19.75■□□□□ 0.75
ATP2A3-214ENST00000574999 C19orf44Q9H6X5 657 aa19.75■□□□□ 0.75
ATP2A3-214ENST00000574999 NEXMIFQ5QGS0 1516 aa19.75■□□□□ 0.75
ATP2A3-214ENST00000574999 FOXD1Q16676 465 aa19.73■□□□□ 0.75
ATP2A3-214ENST00000574999 C14orf37Q86TY3 774 aa19.73■□□□□ 0.75
ATP2A3-214ENST00000574999 CADPS2Q86UW7 1296 aa19.71■□□□□ 0.75
ATP2A3-214ENST00000574999 VGFO15240 615 aaPredicted RBP19.7■□□□□ 0.74
ATP2A3-214ENST00000574999 ATF3P18847 181 aa19.7■□□□□ 0.74
ATP2A3-214ENST00000574999 MPHOSPH9Q99550 1183 aa19.7■□□□□ 0.74
ATP2A3-214ENST00000574999 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
ATP2A3-214ENST00000574999 RPGRIP1LQ68CZ1 1315 aa19.69■□□□□ 0.74
ATP2A3-214ENST00000574999 KIF1BO60333 1816 aa19.69■□□□□ 0.74
ATP2A3-214ENST00000574999 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.68■□□□□ 0.74
ATP2A3-214ENST00000574999 XRN1Q8IZH2 1706 aaKnown RBP19.68■□□□□ 0.74
ATP2A3-214ENST00000574999 RGS17Q9UGC6 210 aaPredicted RBP19.66■□□□□ 0.74
ATP2A3-214ENST00000574999 DCCP43146 1447 aa19.62■□□□□ 0.73
ATP2A3-214ENST00000574999 SETD5Q9C0A6 1442 aa19.62■□□□□ 0.73
ATP2A3-214ENST00000574999 BRINP3Q76B58 766 aa19.62■□□□□ 0.73
ATP2A3-214ENST00000574999 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
ATP2A3-214ENST00000574999 CCDC144AA2RUR9 1427 aa19.61■□□□□ 0.73
ATP2A3-214ENST00000574999 SPATA31E1Q6ZUB1 1445 aa19.6■□□□□ 0.73
ATP2A3-214ENST00000574999 JCADQ9P266 1359 aa19.6■□□□□ 0.73
ATP2A3-214ENST00000574999 RGL3Q3MIN7 710 aa19.6■□□□□ 0.73
ATP2A3-214ENST00000574999 ACIN1Q9UKV3 1341 aaKnown RBP19.59■□□□□ 0.73
ATP2A3-214ENST00000574999 COL16A1Q07092 1604 aaPredicted RBP19.58■□□□□ 0.73
ATP2A3-214ENST00000574999 ROBO2Q9HCK4 1378 aa19.58■□□□□ 0.73
ATP2A3-214ENST00000574999 ADGRF5Q8IZF2 1346 aa19.58■□□□□ 0.73
ATP2A3-214ENST00000574999 SETD1AO15047 1707 aaKnown RBP19.58■□□□□ 0.72
ATP2A3-214ENST00000574999 MST1RQ04912 1400 aa19.58■□□□□ 0.72
ATP2A3-214ENST00000574999 ADGRL3Q9HAR2 1447 aa19.58■□□□□ 0.72
ATP2A3-214ENST00000574999 PPLO60437 1756 aa19.57■□□□□ 0.72
ATP2A3-214ENST00000574999 AHDC1Q5TGY3 1603 aaPredicted RBP19.57■□□□□ 0.72
ATP2A3-214ENST00000574999 PTCH1Q13635 1447 aa19.56■□□□□ 0.72
ATP2A3-214ENST00000574999 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
ATP2A3-214ENST00000574999 RAB3GAP2Q9H2M9 1393 aa19.55■□□□□ 0.72
ATP2A3-214ENST00000574999 POTEAQ6S8J7 498 aa19.54■□□□□ 0.72
ATP2A3-214ENST00000574999 ANKRD30BQ9BXX2 1392 aa19.54■□□□□ 0.72
ATP2A3-214ENST00000574999 ASXL1Q8IXJ9 1541 aa19.52■□□□□ 0.72
ATP2A3-214ENST00000574999 NALCNQ8IZF0 1738 aa19.52■□□□□ 0.72
ATP2A3-214ENST00000574999 SPATA31A6Q5VVP1 1343 aa19.51■□□□□ 0.71
ATP2A3-214ENST00000574999 C1orf167Q5SNV9 1468 aa19.49■□□□□ 0.71
ATP2A3-214ENST00000574999 DDX17Q92841 729 aaKnown RBP19.49■□□□□ 0.71
ATP2A3-214ENST00000574999 LRP6O75581 1613 aa19.48■□□□□ 0.71
ATP2A3-214ENST00000574999 TMEM132EQ6IEE7 984 aa19.48■□□□□ 0.71
ATP2A3-214ENST00000574999 STK26Q9P289 416 aa19.47■□□□□ 0.71
ATP2A3-214ENST00000574999 PIK3C2GO75747 1445 aa19.47■□□□□ 0.71
ATP2A3-214ENST00000574999 IFT172Q9UG01 1749 aa19.47■□□□□ 0.71
ATP2A3-214ENST00000574999 LRRC59Q96AG4 307 aaKnown RBP19.46■□□□□ 0.71
ATP2A3-214ENST00000574999 ORAI2Q96SN7 254 aa19.46■□□□□ 0.71
ATP2A3-214ENST00000574999 SHPRHQ149N8 1683 aa19.46■□□□□ 0.71
ATP2A3-214ENST00000574999 LRPPRCP42704 1394 aaKnown RBP19.45■□□□□ 0.7
ATP2A3-214ENST00000574999 NHSL1Q5SYE7 1610 aa19.45■□□□□ 0.7
ATP2A3-214ENST00000574999 HRCP23327 699 aa19.45■□□□□ 0.7
ATP2A3-214ENST00000574999 WAPLQ7Z5K2 1190 aa19.45■□□□□ 0.7
ATP2A3-214ENST00000574999 ABCC11Q96J66 1382 aa19.44■□□□□ 0.7
ATP2A3-214ENST00000574999 TECPR2O15040 1411 aa19.44■□□□□ 0.7
ATP2A3-214ENST00000574999 C14orf93Q9H972 538 aaKnown RBP19.44■□□□□ 0.7
ATP2A3-214ENST00000574999 NUTM2BA6NNL0 878 aaPredicted RBP19.42■□□□□ 0.7
ATP2A3-214ENST00000574999 NUTM2EB1AL46 878 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms