RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 RABGEF1Q9UJ41 708 aa8.7□□□□□ -1.02
PRPF8-211ENST00000574728 CCDC88BA6NC98 1476 aa8.7□□□□□ -1.02
PRPF8-211ENST00000574728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.69□□□□□ -1.02
PRPF8-211ENST00000574728 EYA1Q99502 592 aa8.69□□□□□ -1.02
PRPF8-211ENST00000574728 GPCPD1Q9NPB8 672 aa8.69□□□□□ -1.02
PRPF8-211ENST00000574728 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
PRPF8-211ENST00000574728 ERCC6Q03468 1493 aa8.69□□□□□ -1.02
PRPF8-211ENST00000574728 TK2O00142 265 aa8.68□□□□□ -1.02
PRPF8-211ENST00000574728 TMEM132AQ24JP5 1023 aa8.68□□□□□ -1.02
PRPF8-211ENST00000574728 GIGYF2Q6Y7W6 1299 aaKnown RBP8.68□□□□□ -1.02
PRPF8-211ENST00000574728 VPS9D1Q9Y2B5 631 aa8.68□□□□□ -1.02
PRPF8-211ENST00000574728 THOC2Q8NI27 1593 aaKnown RBP8.68□□□□□ -1.02
PRPF8-211ENST00000574728 RCCD1A6NED2 376 aa8.67□□□□□ -1.02
PRPF8-211ENST00000574728 C3orf80F5H4A9 247 aa8.67□□□□□ -1.02
PRPF8-211ENST00000574728 CUX2O14529 1486 aa8.67□□□□□ -1.02
PRPF8-211ENST00000574728 DNAJB2P25686 324 aa8.67□□□□□ -1.02
PRPF8-211ENST00000574728 PDS5BQ9NTI5 1447 aa8.67□□□□□ -1.02
PRPF8-211ENST00000574728 SMAPO00193 183 aa8.66□□□□□ -1.02
PRPF8-211ENST00000574728 LSM11P83369 360 aaKnown RBP eCLIP8.66□□□□□ -1.02
PRPF8-211ENST00000574728 NLRP7Q8WX94 980 aa8.66□□□□□ -1.02
PRPF8-211ENST00000574728 TMUB1Q9BVT8 246 aa8.66□□□□□ -1.02
PRPF8-211ENST00000574728 NBPF3Q9H094 633 aa8.66□□□□□ -1.02
PRPF8-211ENST00000574728 REPIN1Q9BWE0 567 aaKnown RBP8.65□□□□□ -1.02
PRPF8-211ENST00000574728 DDRGK1Q96HY6 314 aa8.64□□□□□ -1.03
PRPF8-211ENST00000574728 KIF21AQ7Z4S6 1674 aa8.64□□□□□ -1.03
PRPF8-211ENST00000574728 SSTR3P32745 418 aaPredicted RBP8.63□□□□□ -1.03
PRPF8-211ENST00000574728 ADGRD1Q6QNK2 874 aa8.63□□□□□ -1.03
PRPF8-211ENST00000574728 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
PRPF8-211ENST00000574728 SEPT9Q9UHD8 586 aaPredicted RBP8.63□□□□□ -1.03
PRPF8-211ENST00000574728 FANCD2Q9BXW9 1451 aa8.63□□□□□ -1.03
PRPF8-211ENST00000574728 FAM98CQ17RN3 349 aaKnown RBP8.62□□□□□ -1.03
PRPF8-211ENST00000574728 LAPTM4BQ86VI4 370 aa8.62□□□□□ -1.03
PRPF8-211ENST00000574728 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
PRPF8-211ENST00000574728 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
PRPF8-211ENST00000574728 FAM217BQ9NTX9 383 aaPredicted RBP8.62□□□□□ -1.03
PRPF8-211ENST00000574728 BHMG1C9JSJ3 638 aaPredicted RBP8.61□□□□□ -1.03
PRPF8-211ENST00000574728 MS4A1P11836 297 aa8.61□□□□□ -1.03
PRPF8-211ENST00000574728 HDGFP51858 240 aaKnown RBP8.61□□□□□ -1.03
PRPF8-211ENST00000574728 ANKRD13DQ6ZTN6 518 aa8.61□□□□□ -1.03
PRPF8-211ENST00000574728 MRPL50Q8N5N7 158 aaKnown RBP8.61□□□□□ -1.03
PRPF8-211ENST00000574728 MRC2Q9UBG0 1479 aa8.61□□□□□ -1.03
PRPF8-211ENST00000574728 WDR62O43379 1518 aa8.6□□□□□ -1.03
PRPF8-211ENST00000574728 SULF1Q8IWU6 871 aa8.6□□□□□ -1.03
PRPF8-211ENST00000574728 STAC3Q96MF2 364 aa8.6□□□□□ -1.03
PRPF8-211ENST00000574728 SLC4A3P48751 1232 aa8.59□□□□□ -1.03
PRPF8-211ENST00000574728 POTEGQ6S5H5 508 aa8.59□□□□□ -1.03
PRPF8-211ENST00000574728 URB2Q14146 1524 aaKnown RBP8.59□□□□□ -1.03
PRPF8-211ENST00000574728 CEP164Q9UPV0 1460 aa8.58□□□□□ -1.04
PRPF8-211ENST00000574728 HRO43593 1189 aa8.58□□□□□ -1.04
PRPF8-211ENST00000574728 POTEMA6NI47 508 aa8.57□□□□□ -1.04
PRPF8-211ENST00000574728 DDX11L8A8MPP1 907 aa8.57□□□□□ -1.04
PRPF8-211ENST00000574728 SWT1Q5T5J6 900 aaKnown RBP8.57□□□□□ -1.04
PRPF8-211ENST00000574728 RSPH4AQ5TD94 716 aa8.57□□□□□ -1.04
PRPF8-211ENST00000574728 BEGAINQ9BUH8 593 aa8.57□□□□□ -1.04
PRPF8-211ENST00000574728 PLEKHG3A1L390 1219 aa8.56□□□□□ -1.04
PRPF8-211ENST00000574728 ZFRQ96KR1 1074 aaKnown RBP8.56□□□□□ -1.04
PRPF8-211ENST00000574728 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
PRPF8-211ENST00000574728 KRTAP3-2Q9BYR7 98 aa8.56□□□□□ -1.04
PRPF8-211ENST00000574728 GOLGA8CPA6NN73 597 aa8.55□□□□□ -1.04
PRPF8-211ENST00000574728 SUPT5HO00267 1087 aaKnown RBP8.55□□□□□ -1.04
PRPF8-211ENST00000574728 CD46P15529 392 aa8.55□□□□□ -1.04
PRPF8-211ENST00000574728 SLF2Q8IX21 1173 aa8.55□□□□□ -1.04
PRPF8-211ENST00000574728 RDH13Q8NBN7 331 aa8.55□□□□□ -1.04
PRPF8-211ENST00000574728 SAMD7Q7Z3H4 446 aa8.54□□□□□ -1.04
PRPF8-211ENST00000574728 CDAN1Q8IWY9 1227 aa8.54□□□□□ -1.04
PRPF8-211ENST00000574728 DIXDC1Q155Q3 683 aa8.53□□□□□ -1.04
PRPF8-211ENST00000574728 RSPH6AQ9H0K4 717 aa8.53□□□□□ -1.04
PRPF8-211ENST00000574728 ANKK1Q8NFD2 765 aa8.52□□□□□ -1.05
PRPF8-211ENST00000574728 LRCH3Q96II8 777 aa8.52□□□□□ -1.05
PRPF8-211ENST00000574728 RNF40O75150 1001 aa8.51□□□□□ -1.05
PRPF8-211ENST00000574728 NUTM1Q86Y26 1132 aa8.51□□□□□ -1.05
PRPF8-211ENST00000574728 NECTIN2Q92692 538 aa8.51□□□□□ -1.05
PRPF8-211ENST00000574728 GOPCQ9HD26 462 aa8.51□□□□□ -1.05
PRPF8-211ENST00000574728 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.51□□□□□ -1.05
PRPF8-211ENST00000574728 PRDM2Q13029 1718 aa8.51□□□□□ -1.05
PRPF8-211ENST00000574728 TOPBP1Q92547 1522 aa8.5□□□□□ -1.05
PRPF8-211ENST00000574728 SH3D19Q5HYK7 790 aa8.5□□□□□ -1.05
PRPF8-211ENST00000574728 SLC10A3P09131 477 aa8.49□□□□□ -1.05
PRPF8-211ENST00000574728 GCGRP47871 477 aa8.48□□□□□ -1.05
PRPF8-211ENST00000574728 WNT2BQ93097 391 aa8.48□□□□□ -1.05
PRPF8-211ENST00000574728 TBC1D2Q9BYX2 928 aa8.48□□□□□ -1.05
PRPF8-211ENST00000574728 SKIV2LQ15477 1246 aaKnown RBP8.47□□□□□ -1.05
PRPF8-211ENST00000574728 SPIRE2Q8WWL2 714 aa8.47□□□□□ -1.05
PRPF8-211ENST00000574728 PCMTD1Q96MG8 357 aaPredicted RBP8.47□□□□□ -1.05
PRPF8-211ENST00000574728 GTF3C3Q9Y5Q9 886 aa8.47□□□□□ -1.05
PRPF8-211ENST00000574728 SOWAHBA6NEL2 793 aa8.46□□□□□ -1.06
PRPF8-211ENST00000574728 KDM4AO75164 1064 aa8.46□□□□□ -1.06
PRPF8-211ENST00000574728 CFHP08603 1231 aa8.46□□□□□ -1.06
PRPF8-211ENST00000574728 USP46P62068 366 aa8.46□□□□□ -1.06
PRPF8-211ENST00000574728 MYSM1Q5VVJ2 828 aa8.46□□□□□ -1.06
PRPF8-211ENST00000574728 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.06
PRPF8-211ENST00000574728 KMT5BQ4FZB7 885 aa8.45□□□□□ -1.06
PRPF8-211ENST00000574728 ATP1B4Q9UN42 357 aaPredicted RBP8.45□□□□□ -1.06
PRPF8-211ENST00000574728 CUX1P39880 1505 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 ZNF608Q9ULD9 1512 aaPredicted RBP8.44□□□□□ -1.06
PRPF8-211ENST00000574728 ABCC8Q09428 1581 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 CLK2P49760 499 aaKnown RBP8.44□□□□□ -1.06
PRPF8-211ENST00000574728 BCAMP50895 628 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 PPP4CP60510 307 aa8.44□□□□□ -1.06
PRPF8-211ENST00000574728 PRR14Q9BWN1 585 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms