RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 PPP1R15AO75807 674 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-216ENST00000574344 SENP3Q9H4L4 574 aaPredicted RBP14.64□□□□□ -0.07
NPLOC4-216ENST00000574344 RIMS2Q9UQ26 1411 aa14.63□□□□□ -0.07
NPLOC4-216ENST00000574344 SLC26A8Q96RN1 970 aa14.62□□□□□ -0.07
NPLOC4-216ENST00000574344 ALKQ9UM73 1620 aa14.62□□□□□ -0.07
NPLOC4-216ENST00000574344 ZFYVE9O95405 1425 aa14.61□□□□□ -0.07
NPLOC4-216ENST00000574344 CHD2O14647 1828 aaKnown RBP14.61□□□□□ -0.07
NPLOC4-216ENST00000574344 KIF1BO60333 1816 aa14.61□□□□□ -0.07
NPLOC4-216ENST00000574344 NWD1Q149M9 1564 aa14.6□□□□□ -0.07
NPLOC4-216ENST00000574344 HDGFP51858 240 aaKnown RBP14.6□□□□□ -0.07
NPLOC4-216ENST00000574344 NAIPQ13075 1403 aa14.59□□□□□ -0.07
NPLOC4-216ENST00000574344 PLEKHG1Q9ULL1 1385 aa14.59□□□□□ -0.07
NPLOC4-216ENST00000574344 NKTRP30414 1462 aaKnown RBP14.58□□□□□ -0.08
NPLOC4-216ENST00000574344 HSPA1LP34931 641 aa14.58□□□□□ -0.08
NPLOC4-216ENST00000574344 DIP2AQ14689 1571 aa14.57□□□□□ -0.08
NPLOC4-216ENST00000574344 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.57□□□□□ -0.08
NPLOC4-216ENST00000574344 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
NPLOC4-216ENST00000574344 KCNA6P17658 529 aa14.56□□□□□ -0.08
NPLOC4-216ENST00000574344 NUTM2DQ5VT03 806 aaPredicted RBP14.56□□□□□ -0.08
NPLOC4-216ENST00000574344 TMEM94Q12767 1356 aa14.56□□□□□ -0.08
NPLOC4-216ENST00000574344 PROSER2Q86WR7 435 aaPredicted RBP14.55□□□□□ -0.08
NPLOC4-216ENST00000574344 TRIM52Q96A61 297 aa14.55□□□□□ -0.08
NPLOC4-216ENST00000574344 HFM1A2PYH4 1435 aa14.55□□□□□ -0.08
NPLOC4-216ENST00000574344 TRPM2O94759 1503 aa14.55□□□□□ -0.08
NPLOC4-216ENST00000574344 MED1Q15648 1581 aaPredicted RBP14.54□□□□□ -0.08
NPLOC4-216ENST00000574344 ZNF326Q5BKZ1 582 aaKnown RBP14.53□□□□□ -0.08
NPLOC4-216ENST00000574344 ROBO1Q9Y6N7 1651 aa14.52□□□□□ -0.08
NPLOC4-216ENST00000574344 RBM33Q96EV2 1170 aaKnown RBP14.52□□□□□ -0.09
NPLOC4-216ENST00000574344 MSH6P52701 1360 aa14.5□□□□□ -0.09
NPLOC4-216ENST00000574344 NRXN3Q9Y4C0 1643 aa14.5□□□□□ -0.09
NPLOC4-216ENST00000574344 ADAMTS13Q76LX8 1427 aa14.49□□□□□ -0.09
NPLOC4-216ENST00000574344 NEXMIFQ5QGS0 1516 aa14.48□□□□□ -0.09
NPLOC4-216ENST00000574344 ILDR2Q71H61 639 aa14.48□□□□□ -0.09
NPLOC4-216ENST00000574344 C14orf37Q86TY3 774 aa14.48□□□□□ -0.09
NPLOC4-216ENST00000574344 TBX22Q9Y458 520 aa14.48□□□□□ -0.09
NPLOC4-216ENST00000574344 SETBP1Q9Y6X0 1596 aa14.47□□□□□ -0.09
NPLOC4-216ENST00000574344 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.47□□□□□ -0.09
NPLOC4-216ENST00000574344 SLC4A1APQ9BWU0 796 aaKnown RBP14.47□□□□□ -0.09
NPLOC4-216ENST00000574344 PHLPP1O60346 1717 aa14.46□□□□□ -0.09
NPLOC4-216ENST00000574344 PPLO60437 1756 aa14.46□□□□□ -0.09
NPLOC4-216ENST00000574344 XRN1Q8IZH2 1706 aaKnown RBP14.46□□□□□ -0.1
NPLOC4-216ENST00000574344 PIK3R4Q99570 1358 aa14.46□□□□□ -0.1
NPLOC4-216ENST00000574344 FAM135BQ49AJ0 1406 aa14.44□□□□□ -0.1
NPLOC4-216ENST00000574344 PHF23Q9BUL5 403 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-216ENST00000574344 AMOTL2Q9Y2J4 779 aa14.42□□□□□ -0.1
NPLOC4-216ENST00000574344 PTPRUQ92729 1446 aa14.41□□□□□ -0.1
NPLOC4-216ENST00000574344 NCOA3Q9Y6Q9 1424 aa14.41□□□□□ -0.1
NPLOC4-216ENST00000574344 SETD1AO15047 1707 aaKnown RBP14.41□□□□□ -0.1
NPLOC4-216ENST00000574344 NALCNQ8IZF0 1738 aa14.39□□□□□ -0.11
NPLOC4-216ENST00000574344 ATF3P18847 181 aa14.39□□□□□ -0.11
NPLOC4-216ENST00000574344 FOXD1Q16676 465 aa14.39□□□□□ -0.11
NPLOC4-216ENST00000574344 SLAIN2Q9P270 581 aa14.39□□□□□ -0.11
NPLOC4-216ENST00000574344 CCDC144AA2RUR9 1427 aa14.39□□□□□ -0.11
NPLOC4-216ENST00000574344 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
NPLOC4-216ENST00000574344 SOCS7O14512 581 aa14.38□□□□□ -0.11
NPLOC4-216ENST00000574344 METP08581 1390 aa14.37□□□□□ -0.11
NPLOC4-216ENST00000574344 CADPS2Q86UW7 1296 aa14.37□□□□□ -0.11
NPLOC4-216ENST00000574344 COL16A1Q07092 1604 aaPredicted RBP14.37□□□□□ -0.11
NPLOC4-216ENST00000574344 SETD5Q9C0A6 1442 aa14.36□□□□□ -0.11
NPLOC4-216ENST00000574344 VGFO15240 615 aaPredicted RBP14.36□□□□□ -0.11
NPLOC4-216ENST00000574344 C19orf44Q9H6X5 657 aa14.36□□□□□ -0.11
NPLOC4-216ENST00000574344 MPHOSPH9Q99550 1183 aa14.35□□□□□ -0.11
NPLOC4-216ENST00000574344 RPGRIP1LQ68CZ1 1315 aa14.35□□□□□ -0.11
NPLOC4-216ENST00000574344 DCCP43146 1447 aa14.34□□□□□ -0.11
NPLOC4-216ENST00000574344 AHDC1Q5TGY3 1603 aaPredicted RBP14.33□□□□□ -0.11
NPLOC4-216ENST00000574344 ADGRL3Q9HAR2 1447 aa14.32□□□□□ -0.12
NPLOC4-216ENST00000574344 RGL3Q3MIN7 710 aa14.32□□□□□ -0.12
NPLOC4-216ENST00000574344 ACIN1Q9UKV3 1341 aaKnown RBP14.32□□□□□ -0.12
NPLOC4-216ENST00000574344 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
NPLOC4-216ENST00000574344 NHSL1Q5SYE7 1610 aa14.31□□□□□ -0.12
NPLOC4-216ENST00000574344 RAB3GAP2Q9H2M9 1393 aa14.31□□□□□ -0.12
NPLOC4-216ENST00000574344 JCADQ9P266 1359 aa14.31□□□□□ -0.12
NPLOC4-216ENST00000574344 PTCH1Q13635 1447 aa14.31□□□□□ -0.12
NPLOC4-216ENST00000574344 ASXL1Q8IXJ9 1541 aa14.31□□□□□ -0.12
NPLOC4-216ENST00000574344 MST1RQ04912 1400 aa14.29□□□□□ -0.12
NPLOC4-216ENST00000574344 SPATA31E1Q6ZUB1 1445 aa14.29□□□□□ -0.12
NPLOC4-216ENST00000574344 KNDC1Q76NI1 1749 aa14.28□□□□□ -0.12
NPLOC4-216ENST00000574344 ANKRD30BQ9BXX2 1392 aa14.27□□□□□ -0.12
NPLOC4-216ENST00000574344 BRINP3Q76B58 766 aa14.27□□□□□ -0.13
NPLOC4-216ENST00000574344 LAMC1P11047 1609 aa14.26□□□□□ -0.13
NPLOC4-216ENST00000574344 ROBO2Q9HCK4 1378 aa14.26□□□□□ -0.13
NPLOC4-216ENST00000574344 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
NPLOC4-216ENST00000574344 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
NPLOC4-216ENST00000574344 MEX3CQ5U5Q3 659 aaKnown RBP14.24□□□□□ -0.13
NPLOC4-216ENST00000574344 PIK3C2GO75747 1445 aa14.24□□□□□ -0.13
NPLOC4-216ENST00000574344 C1orf167Q5SNV9 1468 aa14.23□□□□□ -0.13
NPLOC4-216ENST00000574344 LRP6O75581 1613 aa14.23□□□□□ -0.13
NPLOC4-216ENST00000574344 CDC42BPGQ6DT37 1551 aa14.22□□□□□ -0.13
NPLOC4-216ENST00000574344 SPATA31A6Q5VVP1 1343 aa14.22□□□□□ -0.13
NPLOC4-216ENST00000574344 STK26Q9P289 416 aa14.22□□□□□ -0.13
NPLOC4-216ENST00000574344 RGS17Q9UGC6 210 aaPredicted RBP14.22□□□□□ -0.13
NPLOC4-216ENST00000574344 MYOM2P54296 1465 aa14.21□□□□□ -0.13
NPLOC4-216ENST00000574344 NUTM2BA6NNL0 878 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-216ENST00000574344 NUTM2EB1AL46 878 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-216ENST00000574344 TMEM132EQ6IEE7 984 aa14.19□□□□□ -0.14
NPLOC4-216ENST00000574344 NUTM2AQ8IVF1 878 aaPredicted RBP14.19□□□□□ -0.14
NPLOC4-216ENST00000574344 DDX17Q92841 729 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-216ENST00000574344 LRPPRCP42704 1394 aaKnown RBP14.19□□□□□ -0.14
NPLOC4-216ENST00000574344 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
NPLOC4-216ENST00000574344 TECPR2O15040 1411 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms