RNA–Protein interactions for RNA: ENST00000572650.1

ABR-219, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 4

Gene ABR, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-219ENST00000572650 RGS17Q9UGC6 210 aaPredicted RBP26.96■■□□□ 1.91
ABR-219ENST00000572650 FAM50AQ14320 339 aaKnown RBP26.95■■□□□ 1.9
ABR-219ENST00000572650 PLEKHG1Q9ULL1 1385 aa26.93■■□□□ 1.9
ABR-219ENST00000572650 ROBO1Q9Y6N7 1651 aa26.9■■□□□ 1.9
ABR-219ENST00000572650 RBM33Q96EV2 1170 aaKnown RBP26.9■■□□□ 1.9
ABR-219ENST00000572650 TMEM131LA2VDJ0 1609 aa26.9■■□□□ 1.9
ABR-219ENST00000572650 RIMS2Q9UQ26 1411 aa26.89■■□□□ 1.89
ABR-219ENST00000572650 UNC13BO14795 1591 aa26.88■■□□□ 1.89
ABR-219ENST00000572650 GCC2Q8IWJ2 1684 aa26.87■■□□□ 1.89
ABR-219ENST00000572650 HDGFP51858 240 aaKnown RBP26.87■■□□□ 1.89
ABR-219ENST00000572650 MSH6P52701 1360 aa26.86■■□□□ 1.89
ABR-219ENST00000572650 ROCK1Q13464 1354 aa26.85■■□□□ 1.89
ABR-219ENST00000572650 BCANQ96GW7 911 aa26.85■■□□□ 1.89
ABR-219ENST00000572650 TBX22Q9Y458 520 aa26.85■■□□□ 1.89
ABR-219ENST00000572650 CHD2O14647 1828 aaKnown RBP26.85■■□□□ 1.89
ABR-219ENST00000572650 MYO5BQ9ULV0 1848 aa26.85■■□□□ 1.89
ABR-219ENST00000572650 NCOA3Q9Y6Q9 1424 aa26.82■■□□□ 1.88
ABR-219ENST00000572650 SLAIN2Q9P270 581 aa26.82■■□□□ 1.88
ABR-219ENST00000572650 PPP1R15AO75807 674 aaPredicted RBP26.81■■□□□ 1.88
ABR-219ENST00000572650 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.81■■□□□ 1.88
ABR-219ENST00000572650 E9PCH4 1651 aa26.8■■□□□ 1.88
ABR-219ENST00000572650 ADAMTS13Q76LX8 1427 aa26.79■■□□□ 1.88
ABR-219ENST00000572650 IQGAP3Q86VI3 1631 aa26.78■■□□□ 1.88
ABR-219ENST00000572650 PIK3R4Q99570 1358 aa26.76■■□□□ 1.87
ABR-219ENST00000572650 POTEAQ6S8J7 498 aa26.76■■□□□ 1.87
ABR-219ENST00000572650 DIP2AQ14689 1571 aa26.75■■□□□ 1.87
ABR-219ENST00000572650 JCADQ9P266 1359 aa26.72■■□□□ 1.87
ABR-219ENST00000572650 CHGAP10645 457 aaKnown RBP26.72■■□□□ 1.87
ABR-219ENST00000572650 PHLPP1O60346 1717 aa26.72■■□□□ 1.87
ABR-219ENST00000572650 NUP155O75694 1391 aa26.7■■□□□ 1.86
ABR-219ENST00000572650 COL16A1Q07092 1604 aaPredicted RBP26.68■■□□□ 1.86
ABR-219ENST00000572650 NUTM2DQ5VT03 806 aaPredicted RBP26.68■■□□□ 1.86
ABR-219ENST00000572650 C19orf44Q9H6X5 657 aa26.67■■□□□ 1.86
ABR-219ENST00000572650 CADPS2Q86UW7 1296 aa26.66■■□□□ 1.86
ABR-219ENST00000572650 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.65■■□□□ 1.86
ABR-219ENST00000572650 TRPM2O94759 1503 aa26.65■■□□□ 1.86
ABR-219ENST00000572650 PTPRUQ92729 1446 aa26.65■■□□□ 1.86
ABR-219ENST00000572650 AHDC1Q5TGY3 1603 aaPredicted RBP26.62■■□□□ 1.85
ABR-219ENST00000572650 C14orf37Q86TY3 774 aa26.61■■□□□ 1.85
ABR-219ENST00000572650 AMOTL2Q9Y2J4 779 aa26.61■■□□□ 1.85
ABR-219ENST00000572650 SPATA31A6Q5VVP1 1343 aa26.61■■□□□ 1.85
ABR-219ENST00000572650 ATF3P18847 181 aa26.6■■□□□ 1.85
ABR-219ENST00000572650 SETBP1Q9Y6X0 1596 aa26.58■■□□□ 1.85
ABR-219ENST00000572650 NRXN3Q9Y4C0 1643 aa26.58■■□□□ 1.85
ABR-219ENST00000572650 LRP6O75581 1613 aa26.57■■□□□ 1.84
ABR-219ENST00000572650 DCCP43146 1447 aa26.57■■□□□ 1.84
ABR-219ENST00000572650 ITGAEP38570 1179 aa26.56■■□□□ 1.84
ABR-219ENST00000572650 XRN1Q8IZH2 1706 aaKnown RBP26.55■■□□□ 1.84
ABR-219ENST00000572650 SPHKAPQ2M3C7 1700 aa26.54■■□□□ 1.84
ABR-219ENST00000572650 BRINP3Q76B58 766 aa26.54■■□□□ 1.84
ABR-219ENST00000572650 SHPRHQ149N8 1683 aa26.54■■□□□ 1.84
ABR-219ENST00000572650 METP08581 1390 aa26.49■■□□□ 1.83
ABR-219ENST00000572650 ZNF772Q68DY9 489 aaPredicted RBP26.48■■□□□ 1.83
ABR-219ENST00000572650 MST1RQ04912 1400 aa26.48■■□□□ 1.83
ABR-219ENST00000572650 ASXL1Q8IXJ9 1541 aa26.47■■□□□ 1.83
ABR-219ENST00000572650 NEXMIFQ5QGS0 1516 aa26.46■■□□□ 1.83
ABR-219ENST00000572650 SETD1AO15047 1707 aaKnown RBP26.46■■□□□ 1.83
ABR-219ENST00000572650 ZNF326Q5BKZ1 582 aaKnown RBP26.46■■□□□ 1.83
ABR-219ENST00000572650 SETD5Q9C0A6 1442 aa26.46■■□□□ 1.83
ABR-219ENST00000572650 MEX3CQ5U5Q3 659 aaKnown RBP26.45■■□□□ 1.82
ABR-219ENST00000572650 CLTCL1P53675 1640 aa26.44■■□□□ 1.82
ABR-219ENST00000572650 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
ABR-219ENST00000572650 RRBP1Q9P2E9 1410 aaKnown RBP26.43■■□□□ 1.82
ABR-219ENST00000572650 NAIPQ13075 1403 aa26.41■■□□□ 1.82
ABR-219ENST00000572650 ADGRL3Q9HAR2 1447 aa26.41■■□□□ 1.82
ABR-219ENST00000572650 NHSL1Q5SYE7 1610 aa26.41■■□□□ 1.82
ABR-219ENST00000572650 LRRC59Q96AG4 307 aaKnown RBP26.36■■□□□ 1.81
ABR-219ENST00000572650 NALCNQ8IZF0 1738 aa26.34■■□□□ 1.81
ABR-219ENST00000572650 CDK12Q9NYV4 1490 aaPredicted RBP26.34■■□□□ 1.81
ABR-219ENST00000572650 PTCH1Q13635 1447 aa26.33■■□□□ 1.81
ABR-219ENST00000572650 PRAG1Q86YV5 1406 aa26.33■■□□□ 1.81
ABR-219ENST00000572650 KIF1BO60333 1816 aa26.33■■□□□ 1.81
ABR-219ENST00000572650 NUTM2BA6NNL0 878 aaPredicted RBP26.33■■□□□ 1.81
ABR-219ENST00000572650 NUTM2EB1AL46 878 aaPredicted RBP26.33■■□□□ 1.81
ABR-219ENST00000572650 RXRBP28702 533 aa26.33■■□□□ 1.81
ABR-219ENST00000572650 NUTM2AQ8IVF1 878 aaPredicted RBP26.33■■□□□ 1.81
ABR-219ENST00000572650 UPF1Q92900 1129 aaKnown RBP eCLIP26.33■■□□□ 1.81
ABR-219ENST00000572650 C1orf167Q5SNV9 1468 aa26.31■■□□□ 1.8
ABR-219ENST00000572650 TRIM52Q96A61 297 aa26.31■■□□□ 1.8
ABR-219ENST00000572650 PNPLA6Q8IY17 1366 aa26.31■■□□□ 1.8
ABR-219ENST00000572650 VGFO15240 615 aaPredicted RBP26.3■■□□□ 1.8
ABR-219ENST00000572650 AFF2P51816 1311 aa26.3■■□□□ 1.8
ABR-219ENST00000572650 DDX17Q92841 729 aaKnown RBP26.29■■□□□ 1.8
ABR-219ENST00000572650 RPGRIP1LQ68CZ1 1315 aa26.29■■□□□ 1.8
ABR-219ENST00000572650 HFM1A2PYH4 1435 aa26.29■■□□□ 1.8
ABR-219ENST00000572650 LAMC1P11047 1609 aa26.28■■□□□ 1.8
ABR-219ENST00000572650 ROBO2Q9HCK4 1378 aa26.27■■□□□ 1.8
ABR-219ENST00000572650 SOS2Q07890 1332 aaPredicted RBP26.22■■□□□ 1.79
ABR-219ENST00000572650 C8orf37Q96NL8 207 aa26.2■■□□□ 1.78
ABR-219ENST00000572650 SLC4A1APQ9BWU0 796 aaKnown RBP26.2■■□□□ 1.78
ABR-219ENST00000572650 ORAI2Q96SN7 254 aa26.19■■□□□ 1.78
ABR-219ENST00000572650 PPLO60437 1756 aa26.18■■□□□ 1.78
ABR-219ENST00000572650 RBM6P78332 1123 aaKnown RBP26.18■■□□□ 1.78
ABR-219ENST00000572650 QTRT2Q9H974 415 aaKnown RBP26.18■■□□□ 1.78
ABR-219ENST00000572650 RGS12O14924 1447 aa26.16■■□□□ 1.78
ABR-219ENST00000572650 NGLY1Q96IV0 654 aa26.12■■□□□ 1.77
ABR-219ENST00000572650 CDC42BPGQ6DT37 1551 aa26.12■■□□□ 1.77
ABR-219ENST00000572650 ADAMTS2O95450 1211 aa26.11■■□□□ 1.77
ABR-219ENST00000572650 COL22A1Q8NFW1 1626 aaPredicted RBP26.1■■□□□ 1.77
ABR-219ENST00000572650 TECPR2O15040 1411 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms