RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 SLC26A8Q96RN1 970 aa26.4■■□□□ 1.82
LITAF-211ENST00000572255 RIMS2Q9UQ26 1411 aa26.39■■□□□ 1.81
LITAF-211ENST00000572255 CHGAP10645 457 aaKnown RBP26.35■■□□□ 1.81
LITAF-211ENST00000572255 KCNA6P17658 529 aa26.35■■□□□ 1.81
LITAF-211ENST00000572255 BCANQ96GW7 911 aa26.35■■□□□ 1.81
LITAF-211ENST00000572255 PLEKHG1Q9ULL1 1385 aa26.34■■□□□ 1.81
LITAF-211ENST00000572255 PPP1R15AO75807 674 aaPredicted RBP26.33■■□□□ 1.81
LITAF-211ENST00000572255 HDGFP51858 240 aaKnown RBP26.33■■□□□ 1.81
LITAF-211ENST00000572255 ILDR2Q71H61 639 aa26.33■■□□□ 1.81
LITAF-211ENST00000572255 SENP3Q9H4L4 574 aaPredicted RBP26.33■■□□□ 1.81
LITAF-211ENST00000572255 NWD1Q149M9 1564 aa26.33■■□□□ 1.8
LITAF-211ENST00000572255 TMEM94Q12767 1356 aa26.31■■□□□ 1.8
LITAF-211ENST00000572255 SPHKAPQ2M3C7 1700 aa26.3■■□□□ 1.8
LITAF-211ENST00000572255 NAIPQ13075 1403 aa26.3■■□□□ 1.8
LITAF-211ENST00000572255 NKTRP30414 1462 aaKnown RBP26.3■■□□□ 1.8
LITAF-211ENST00000572255 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.29■■□□□ 1.8
LITAF-211ENST00000572255 PROSER2Q86WR7 435 aaPredicted RBP26.28■■□□□ 1.8
LITAF-211ENST00000572255 CHD2O14647 1828 aaKnown RBP26.27■■□□□ 1.8
LITAF-211ENST00000572255 MED1Q15648 1581 aaPredicted RBP26.24■■□□□ 1.79
LITAF-211ENST00000572255 NUTM2DQ5VT03 806 aaPredicted RBP26.24■■□□□ 1.79
LITAF-211ENST00000572255 RBM33Q96EV2 1170 aaKnown RBP26.23■■□□□ 1.79
LITAF-211ENST00000572255 TBX22Q9Y458 520 aa26.22■■□□□ 1.79
LITAF-211ENST00000572255 DIP2AQ14689 1571 aa26.21■■□□□ 1.79
LITAF-211ENST00000572255 HFM1A2PYH4 1435 aa26.21■■□□□ 1.79
LITAF-211ENST00000572255 ADAMTS13Q76LX8 1427 aa26.21■■□□□ 1.79
LITAF-211ENST00000572255 FAM135BQ49AJ0 1406 aa26.17■■□□□ 1.78
LITAF-211ENST00000572255 TRPM2O94759 1503 aa26.17■■□□□ 1.78
LITAF-211ENST00000572255 CLTCL1P53675 1640 aa26.17■■□□□ 1.78
LITAF-211ENST00000572255 MSH6P52701 1360 aa26.15■■□□□ 1.78
LITAF-211ENST00000572255 PIK3R4Q99570 1358 aa26.14■■□□□ 1.78
LITAF-211ENST00000572255 ROBO1Q9Y6N7 1651 aa26.13■■□□□ 1.77
LITAF-211ENST00000572255 SOCS7O14512 581 aa26.13■■□□□ 1.77
LITAF-211ENST00000572255 TRIM52Q96A61 297 aa26.13■■□□□ 1.77
LITAF-211ENST00000572255 ZNF326Q5BKZ1 582 aaKnown RBP26.12■■□□□ 1.77
LITAF-211ENST00000572255 NRXN3Q9Y4C0 1643 aa26.11■■□□□ 1.77
LITAF-211ENST00000572255 KIF1BO60333 1816 aa26.1■■□□□ 1.77
LITAF-211ENST00000572255 SETBP1Q9Y6X0 1596 aa26.1■■□□□ 1.77
LITAF-211ENST00000572255 NCOA3Q9Y6Q9 1424 aa26.09■■□□□ 1.77
LITAF-211ENST00000572255 NEXMIFQ5QGS0 1516 aa26.07■■□□□ 1.76
LITAF-211ENST00000572255 PTPRUQ92729 1446 aa26.06■■□□□ 1.76
LITAF-211ENST00000572255 SLC4A1APQ9BWU0 796 aaKnown RBP26.05■■□□□ 1.76
LITAF-211ENST00000572255 SLAIN2Q9P270 581 aa26.05■■□□□ 1.76
LITAF-211ENST00000572255 AMOTL2Q9Y2J4 779 aa26.05■■□□□ 1.76
LITAF-211ENST00000572255 C14orf37Q86TY3 774 aa26.04■■□□□ 1.76
LITAF-211ENST00000572255 PHF23Q9BUL5 403 aaPredicted RBP26.03■■□□□ 1.76
LITAF-211ENST00000572255 XRN1Q8IZH2 1706 aaKnown RBP26.02■■□□□ 1.76
LITAF-211ENST00000572255 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.02■■□□□ 1.76
LITAF-211ENST00000572255 METP08581 1390 aa25.98■■□□□ 1.75
LITAF-211ENST00000572255 PHLPP1O60346 1717 aa25.98■■□□□ 1.75
LITAF-211ENST00000572255 C19orf44Q9H6X5 657 aa25.98■■□□□ 1.75
LITAF-211ENST00000572255 CADPS2Q86UW7 1296 aa25.96■■□□□ 1.75
LITAF-211ENST00000572255 ATF3P18847 181 aa25.95■■□□□ 1.74
LITAF-211ENST00000572255 FOXD1Q16676 465 aa25.93■■□□□ 1.74
LITAF-211ENST00000572255 VGFO15240 615 aaPredicted RBP25.91■■□□□ 1.74
LITAF-211ENST00000572255 PPLO60437 1756 aa25.91■■□□□ 1.74
LITAF-211ENST00000572255 RPGRIP1LQ68CZ1 1315 aa25.9■■□□□ 1.74
LITAF-211ENST00000572255 DCCP43146 1447 aa25.9■■□□□ 1.74
LITAF-211ENST00000572255 COL16A1Q07092 1604 aaPredicted RBP25.9■■□□□ 1.74
LITAF-211ENST00000572255 SETD1AO15047 1707 aaKnown RBP25.9■■□□□ 1.74
LITAF-211ENST00000572255 MPHOSPH9Q99550 1183 aa25.87■■□□□ 1.73
LITAF-211ENST00000572255 JCADQ9P266 1359 aa25.86■■□□□ 1.73
LITAF-211ENST00000572255 AHDC1Q5TGY3 1603 aaPredicted RBP25.86■■□□□ 1.73
LITAF-211ENST00000572255 CCDC144AA2RUR9 1427 aa25.86■■□□□ 1.73
LITAF-211ENST00000572255 RGS17Q9UGC6 210 aaPredicted RBP25.85■■□□□ 1.73
LITAF-211ENST00000572255 NALCNQ8IZF0 1738 aa25.84■■□□□ 1.73
LITAF-211ENST00000572255 ADGRL3Q9HAR2 1447 aa25.84■■□□□ 1.73
LITAF-211ENST00000572255 MST1RQ04912 1400 aa25.82■■□□□ 1.72
LITAF-211ENST00000572255 SETD5Q9C0A6 1442 aa25.82■■□□□ 1.72
LITAF-211ENST00000572255 BRINP3Q76B58 766 aa25.82■■□□□ 1.72
LITAF-211ENST00000572255 PTCH1Q13635 1447 aa25.81■■□□□ 1.72
LITAF-211ENST00000572255 SPATA31E1Q6ZUB1 1445 aa25.8■■□□□ 1.72
LITAF-211ENST00000572255 ACIN1Q9UKV3 1341 aaKnown RBP25.8■■□□□ 1.72
LITAF-211ENST00000572255 ASXL1Q8IXJ9 1541 aa25.79■■□□□ 1.72
LITAF-211ENST00000572255 IFT172Q9UG01 1749 aa25.78■■□□□ 1.72
LITAF-211ENST00000572255 ROBO2Q9HCK4 1378 aa25.78■■□□□ 1.72
LITAF-211ENST00000572255 PRAG1Q86YV5 1406 aa25.78■■□□□ 1.72
LITAF-211ENST00000572255 RGL3Q3MIN7 710 aa25.77■■□□□ 1.72
LITAF-211ENST00000572255 SHPRHQ149N8 1683 aa25.77■■□□□ 1.72
LITAF-211ENST00000572255 ADGRF5Q8IZF2 1346 aa25.75■■□□□ 1.71
LITAF-211ENST00000572255 NHSL1Q5SYE7 1610 aa25.74■■□□□ 1.71
LITAF-211ENST00000572255 ANKRD30BQ9BXX2 1392 aa25.73■■□□□ 1.71
LITAF-211ENST00000572255 SPATA31A6Q5VVP1 1343 aa25.73■■□□□ 1.71
LITAF-211ENST00000572255 RAB3GAP2Q9H2M9 1393 aa25.72■■□□□ 1.71
LITAF-211ENST00000572255 LRP6O75581 1613 aa25.72■■□□□ 1.71
LITAF-211ENST00000572255 POTEAQ6S8J7 498 aa25.71■■□□□ 1.71
LITAF-211ENST00000572255 C1orf167Q5SNV9 1468 aa25.68■■□□□ 1.7
LITAF-211ENST00000572255 PIK3C2GO75747 1445 aa25.66■■□□□ 1.7
LITAF-211ENST00000572255 MEX3CQ5U5Q3 659 aaKnown RBP25.64■■□□□ 1.7
LITAF-211ENST00000572255 DDX17Q92841 729 aaKnown RBP25.64■■□□□ 1.7
LITAF-211ENST00000572255 TECPR2O15040 1411 aa25.63■■□□□ 1.69
LITAF-211ENST00000572255 LRPPRCP42704 1394 aaKnown RBP25.62■■□□□ 1.69
LITAF-211ENST00000572255 LRRC59Q96AG4 307 aaKnown RBP25.62■■□□□ 1.69
LITAF-211ENST00000572255 STK26Q9P289 416 aa25.62■■□□□ 1.69
LITAF-211ENST00000572255 KNDC1Q76NI1 1749 aa25.62■■□□□ 1.69
LITAF-211ENST00000572255 LAMC1P11047 1609 aa25.62■■□□□ 1.69
LITAF-211ENST00000572255 CDC42BPGQ6DT37 1551 aa25.61■■□□□ 1.69
LITAF-211ENST00000572255 TMEM132EQ6IEE7 984 aa25.6■■□□□ 1.69
LITAF-211ENST00000572255 NUTM2BA6NNL0 878 aaPredicted RBP25.59■■□□□ 1.69
LITAF-211ENST00000572255 NUTM2EB1AL46 878 aaPredicted RBP25.59■■□□□ 1.69
LITAF-211ENST00000572255 NUTM2AQ8IVF1 878 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms