RNA–Protein interactions for RNA: ENST00000571995.5

RAB40B-206, Transcript of RAB40B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40B, Length 3,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-206ENST00000571995 PANK1Q8TE04 598 aa21.01■□□□□ 0.95
RAB40B-206ENST00000571995 FAM135AQ9P2D6 1515 aa21.01■□□□□ 0.95
RAB40B-206ENST00000571995 PER1O15534 1290 aaPredicted RBP21■□□□□ 0.95
RAB40B-206ENST00000571995 SMG6Q86US8 1419 aaKnown RBP20.98■□□□□ 0.95
RAB40B-206ENST00000571995 PDE3BQ13370 1112 aa20.98■□□□□ 0.95
RAB40B-206ENST00000571995 PRAG1Q86YV5 1406 aa20.97■□□□□ 0.95
RAB40B-206ENST00000571995 EIF3AQ14152 1382 aaKnown RBP20.97■□□□□ 0.95
RAB40B-206ENST00000571995 CFAP65Q6ZU64 1925 aaKnown RBP20.96■□□□□ 0.95
RAB40B-206ENST00000571995 GCC2Q8IWJ2 1684 aa20.96■□□□□ 0.95
RAB40B-206ENST00000571995 APBB1O00213 710 aa20.96■□□□□ 0.95
RAB40B-206ENST00000571995 MBD5Q9P267 1494 aa20.96■□□□□ 0.95
RAB40B-206ENST00000571995 RTN4Q9NQC3 1192 aaKnown RBP20.95■□□□□ 0.94
RAB40B-206ENST00000571995 ABCC10Q5T3U5 1492 aa20.95■□□□□ 0.94
RAB40B-206ENST00000571995 HMOX1P09601 288 aa20.94■□□□□ 0.94
RAB40B-206ENST00000571995 VGFO15240 615 aaPredicted RBP20.93■□□□□ 0.94
RAB40B-206ENST00000571995 RALGAPBQ86X10 1494 aa20.93■□□□□ 0.94
RAB40B-206ENST00000571995 IPO9Q96P70 1041 aaKnown RBP20.93■□□□□ 0.94
RAB40B-206ENST00000571995 DEKP35659 375 aaKnown RBP20.93■□□□□ 0.94
RAB40B-206ENST00000571995 PRAM1Q96QH2 718 aa20.92■□□□□ 0.94
RAB40B-206ENST00000571995 TCP11L2Q8N4U5 519 aa20.91■□□□□ 0.94
RAB40B-206ENST00000571995 A2MP01023 1474 aa20.91■□□□□ 0.94
RAB40B-206ENST00000571995 TSR2Q969E8 191 aaKnown RBP20.91■□□□□ 0.94
RAB40B-206ENST00000571995 PLCH2O75038 1416 aa20.91■□□□□ 0.94
RAB40B-206ENST00000571995 ITSN2Q9NZM3 1697 aa20.9■□□□□ 0.94
RAB40B-206ENST00000571995 FANCAO15360 1455 aa20.9■□□□□ 0.94
RAB40B-206ENST00000571995 ADGRL1O94910 1474 aa20.9■□□□□ 0.94
RAB40B-206ENST00000571995 SPINK5Q9NQ38 1064 aaPredicted RBP20.9■□□□□ 0.94
RAB40B-206ENST00000571995 FANCIQ9NVI1 1328 aa20.89■□□□□ 0.94
RAB40B-206ENST00000571995 IDI1Q13907 227 aa20.89■□□□□ 0.93
RAB40B-206ENST00000571995 WAPLQ7Z5K2 1190 aa20.89■□□□□ 0.93
RAB40B-206ENST00000571995 AMER1Q5JTC6 1135 aaPredicted RBP20.88■□□□□ 0.93
RAB40B-206ENST00000571995 CARD14Q9BXL6 1004 aa20.88■□□□□ 0.93
RAB40B-206ENST00000571995 HDGFL2Q7Z4V5 671 aaPredicted RBP20.88■□□□□ 0.93
RAB40B-206ENST00000571995 ADGRL2O95490 1459 aa20.87■□□□□ 0.93
RAB40B-206ENST00000571995 ITPRIPQ8IWB1 547 aa20.87■□□□□ 0.93
RAB40B-206ENST00000571995 SMC4Q9NTJ3 1288 aa20.87■□□□□ 0.93
RAB40B-206ENST00000571995 LTV1Q96GA3 475 aaPredicted RBP20.86■□□□□ 0.93
RAB40B-206ENST00000571995 DMRT2Q9Y5R5 561 aa20.86■□□□□ 0.93
RAB40B-206ENST00000571995 TXNDC2Q86VQ3 553 aa20.86■□□□□ 0.93
RAB40B-206ENST00000571995 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
RAB40B-206ENST00000571995 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
RAB40B-206ENST00000571995 CGNL1Q0VF96 1302 aa20.85■□□□□ 0.93
RAB40B-206ENST00000571995 SLKQ9H2G2 1235 aaPredicted RBP20.84■□□□□ 0.93
RAB40B-206ENST00000571995 CABP1Q9NZU7 370 aa20.84■□□□□ 0.93
RAB40B-206ENST00000571995 NOS1P29475 1434 aa20.83■□□□□ 0.93
RAB40B-206ENST00000571995 ABCA8O94911 1581 aa20.83■□□□□ 0.93
RAB40B-206ENST00000571995 CD109Q6YHK3 1445 aa20.83■□□□□ 0.93
RAB40B-206ENST00000571995 PLA2R1Q13018 1463 aa20.83■□□□□ 0.92
RAB40B-206ENST00000571995 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.92
RAB40B-206ENST00000571995 RBM33Q96EV2 1170 aaKnown RBP20.82■□□□□ 0.92
RAB40B-206ENST00000571995 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.82■□□□□ 0.92
RAB40B-206ENST00000571995 UPF2Q9HAU5 1272 aaKnown RBP20.81■□□□□ 0.92
RAB40B-206ENST00000571995 TERF2IPQ9NYB0 399 aa20.81■□□□□ 0.92
RAB40B-206ENST00000571995 TNNQ9UQP3 1299 aa20.81■□□□□ 0.92
RAB40B-206ENST00000571995 SAMD9LQ8IVG5 1584 aa20.81■□□□□ 0.92
RAB40B-206ENST00000571995 E9PSI1 815 aa20.8■□□□□ 0.92
RAB40B-206ENST00000571995 ASXL2Q76L83 1435 aa20.8■□□□□ 0.92
RAB40B-206ENST00000571995 DUSP27Q5VZP5 1158 aa20.8■□□□□ 0.92
RAB40B-206ENST00000571995 TTC37Q6PGP7 1564 aa20.8■□□□□ 0.92
RAB40B-206ENST00000571995 HSP90AA1P07900 732 aaKnown RBP20.8■□□□□ 0.92
RAB40B-206ENST00000571995 BCORL1Q5H9F3 1711 aa20.8■□□□□ 0.92
RAB40B-206ENST00000571995 PARD3Q8TEW0 1356 aa20.8■□□□□ 0.92
RAB40B-206ENST00000571995 PLEKHH1Q9ULM0 1364 aa20.79■□□□□ 0.92
RAB40B-206ENST00000571995 NSD3Q9BZ95 1437 aa20.79■□□□□ 0.92
RAB40B-206ENST00000571995 SLC26A8Q96RN1 970 aa20.79■□□□□ 0.92
RAB40B-206ENST00000571995 THUMPD2Q9BTF0 503 aaKnown RBP20.79■□□□□ 0.92
RAB40B-206ENST00000571995 CEBPAP49715 358 aaPredicted RBP20.77■□□□□ 0.92
RAB40B-206ENST00000571995 RIPK4P57078 832 aa20.77■□□□□ 0.92
RAB40B-206ENST00000571995 UHRF1BP1Q6BDS2 1440 aa20.76■□□□□ 0.91
RAB40B-206ENST00000571995 SHANK2Q9UPX8 1470 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 SLFN5Q08AF3 891 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 WWC1Q8IX03 1113 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 RUNDC1Q96C34 613 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 UGGT1Q9NYU2 1555 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 TPRNQ4KMQ1 711 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 NECTIN2Q92692 538 aa20.75■□□□□ 0.91
RAB40B-206ENST00000571995 ABCC2Q92887 1545 aa20.74■□□□□ 0.91
RAB40B-206ENST00000571995 PMFBP1Q8TBY8 1022 aa20.74■□□□□ 0.91
RAB40B-206ENST00000571995 ZNF428Q96B54 188 aa20.73■□□□□ 0.91
RAB40B-206ENST00000571995 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
RAB40B-206ENST00000571995 CDC42BPAQ5VT25 1732 aa20.73■□□□□ 0.91
RAB40B-206ENST00000571995 RRS1Q15050 365 aaKnown RBP20.72■□□□□ 0.91
RAB40B-206ENST00000571995 NCKAP5LQ9HCH0 1330 aa20.72■□□□□ 0.91
RAB40B-206ENST00000571995 EXOSC9Q06265 439 aaKnown RBP20.72■□□□□ 0.91
RAB40B-206ENST00000571995 CENPQQ7L2Z9 268 aaPredicted RBP20.72■□□□□ 0.91
RAB40B-206ENST00000571995 MYH16Q9H6N6 1097 aa20.71■□□□□ 0.91
RAB40B-206ENST00000571995 DUOX2Q9NRD8 1548 aa20.7■□□□□ 0.9
RAB40B-206ENST00000571995 MFAP1P55081 439 aaKnown RBP20.7■□□□□ 0.9
RAB40B-206ENST00000571995 NGDNQ8NEJ9 315 aaKnown RBP20.7■□□□□ 0.9
RAB40B-206ENST00000571995 BACH2Q9BYV9 841 aa20.7■□□□□ 0.9
RAB40B-206ENST00000571995 SCAF11Q99590 1463 aaKnown RBP20.69■□□□□ 0.9
RAB40B-206ENST00000571995 DIAPH1O60610 1272 aaKnown RBP20.69■□□□□ 0.9
RAB40B-206ENST00000571995 KDM5CP41229 1560 aa20.68■□□□□ 0.9
RAB40B-206ENST00000571995 DDRGK1Q96HY6 314 aa20.68■□□□□ 0.9
RAB40B-206ENST00000571995 LRPPRCP42704 1394 aaKnown RBP20.68■□□□□ 0.9
RAB40B-206ENST00000571995 A0A0G2JS52 829 aa20.67■□□□□ 0.9
RAB40B-206ENST00000571995 C1orf115Q9H7X2 142 aa20.67■□□□□ 0.9
RAB40B-206ENST00000571995 WDR7Q9Y4E6 1490 aa20.66■□□□□ 0.9
RAB40B-206ENST00000571995 PRKAR2BP31323 418 aa20.66■□□□□ 0.9
RAB40B-206ENST00000571995 SLC4A10Q6U841 1118 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms