RNA–Protein interactions for RNA: ENST00000571714.5

NPLOC4-206, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 676 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-206ENST00000571714 GCC2Q8IWJ2 1684 aa17.42■□□□□ 0.38
NPLOC4-206ENST00000571714 ANKRD50Q9ULJ7 1429 aa17.41■□□□□ 0.38
NPLOC4-206ENST00000571714 MYO5BQ9ULV0 1848 aa17.41■□□□□ 0.38
NPLOC4-206ENST00000571714 TMEM131LA2VDJ0 1609 aa17.4■□□□□ 0.38
NPLOC4-206ENST00000571714 SLC52A1Q9NWF4 448 aa17.4■□□□□ 0.38
NPLOC4-206ENST00000571714 UNC13BO14795 1591 aa17.4■□□□□ 0.38
NPLOC4-206ENST00000571714 PROSER2Q86WR7 435 aaPredicted RBP17.38■□□□□ 0.37
NPLOC4-206ENST00000571714 CHD2O14647 1828 aaKnown RBP17.37■□□□□ 0.37
NPLOC4-206ENST00000571714 PLEKHG1Q9ULL1 1385 aa17.37■□□□□ 0.37
NPLOC4-206ENST00000571714 RIMS2Q9UQ26 1411 aa17.36■□□□□ 0.37
NPLOC4-206ENST00000571714 E9PCH4 1651 aa17.36■□□□□ 0.37
NPLOC4-206ENST00000571714 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
NPLOC4-206ENST00000571714 MSH6P52701 1360 aa17.34■□□□□ 0.37
NPLOC4-206ENST00000571714 PHLPP1O60346 1717 aa17.33■□□□□ 0.37
NPLOC4-206ENST00000571714 POTEAQ6S8J7 498 aa17.33■□□□□ 0.36
NPLOC4-206ENST00000571714 COL16A1Q07092 1604 aaPredicted RBP17.32■□□□□ 0.36
NPLOC4-206ENST00000571714 ADAMTS13Q76LX8 1427 aa17.31■□□□□ 0.36
NPLOC4-206ENST00000571714 BCANQ96GW7 911 aa17.31■□□□□ 0.36
NPLOC4-206ENST00000571714 IQGAP3Q86VI3 1631 aa17.31■□□□□ 0.36
NPLOC4-206ENST00000571714 DIP2AQ14689 1571 aa17.29■□□□□ 0.36
NPLOC4-206ENST00000571714 SLAIN2Q9P270 581 aa17.29■□□□□ 0.36
NPLOC4-206ENST00000571714 PPP1R15AO75807 674 aaPredicted RBP17.28■□□□□ 0.36
NPLOC4-206ENST00000571714 SETD1AO15047 1707 aaKnown RBP17.27■□□□□ 0.36
NPLOC4-206ENST00000571714 TBX22Q9Y458 520 aa17.27■□□□□ 0.36
NPLOC4-206ENST00000571714 NCOA3Q9Y6Q9 1424 aa17.27■□□□□ 0.35
NPLOC4-206ENST00000571714 ROCK1Q13464 1354 aa17.27■□□□□ 0.35
NPLOC4-206ENST00000571714 JCADQ9P266 1359 aa17.27■□□□□ 0.35
NPLOC4-206ENST00000571714 LRP6O75581 1613 aa17.26■□□□□ 0.35
NPLOC4-206ENST00000571714 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.26■□□□□ 0.35
NPLOC4-206ENST00000571714 NUTM2DQ5VT03 806 aaPredicted RBP17.25■□□□□ 0.35
NPLOC4-206ENST00000571714 AHDC1Q5TGY3 1603 aaPredicted RBP17.24■□□□□ 0.35
NPLOC4-206ENST00000571714 NRXN3Q9Y4C0 1643 aa17.24■□□□□ 0.35
NPLOC4-206ENST00000571714 PTPRUQ92729 1446 aa17.23■□□□□ 0.35
NPLOC4-206ENST00000571714 CHGAP10645 457 aaKnown RBP17.23■□□□□ 0.35
NPLOC4-206ENST00000571714 HDGFP51858 240 aaKnown RBP17.23■□□□□ 0.35
NPLOC4-206ENST00000571714 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.23■□□□□ 0.35
NPLOC4-206ENST00000571714 PIK3R4Q99570 1358 aa17.23■□□□□ 0.35
NPLOC4-206ENST00000571714 TRPM2O94759 1503 aa17.22■□□□□ 0.35
NPLOC4-206ENST00000571714 SHPRHQ149N8 1683 aa17.21■□□□□ 0.35
NPLOC4-206ENST00000571714 XRN1Q8IZH2 1706 aaKnown RBP17.21■□□□□ 0.35
NPLOC4-206ENST00000571714 NUP155O75694 1391 aa17.19■□□□□ 0.34
NPLOC4-206ENST00000571714 SETBP1Q9Y6X0 1596 aa17.19■□□□□ 0.34
NPLOC4-206ENST00000571714 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
NPLOC4-206ENST00000571714 C14orf37Q86TY3 774 aa17.17■□□□□ 0.34
NPLOC4-206ENST00000571714 CADPS2Q86UW7 1296 aa17.17■□□□□ 0.34
NPLOC4-206ENST00000571714 C19orf44Q9H6X5 657 aa17.17■□□□□ 0.34
NPLOC4-206ENST00000571714 SPATA31A6Q5VVP1 1343 aa17.17■□□□□ 0.34
NPLOC4-206ENST00000571714 DCCP43146 1447 aa17.15■□□□□ 0.34
NPLOC4-206ENST00000571714 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
NPLOC4-206ENST00000571714 ATF3P18847 181 aa17.14■□□□□ 0.33
NPLOC4-206ENST00000571714 BRINP3Q76B58 766 aa17.14■□□□□ 0.33
NPLOC4-206ENST00000571714 ASXL1Q8IXJ9 1541 aa17.14■□□□□ 0.33
NPLOC4-206ENST00000571714 NHSL1Q5SYE7 1610 aa17.13■□□□□ 0.33
NPLOC4-206ENST00000571714 MST1RQ04912 1400 aa17.13■□□□□ 0.33
NPLOC4-206ENST00000571714 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
NPLOC4-206ENST00000571714 ITGAEP38570 1179 aa17.12■□□□□ 0.33
NPLOC4-206ENST00000571714 NEXMIFQ5QGS0 1516 aa17.11■□□□□ 0.33
NPLOC4-206ENST00000571714 METP08581 1390 aa17.11■□□□□ 0.33
NPLOC4-206ENST00000571714 NALCNQ8IZF0 1738 aa17.1■□□□□ 0.33
NPLOC4-206ENST00000571714 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
NPLOC4-206ENST00000571714 MEX3CQ5U5Q3 659 aaKnown RBP17.08■□□□□ 0.32
NPLOC4-206ENST00000571714 ADGRL3Q9HAR2 1447 aa17.07■□□□□ 0.32
NPLOC4-206ENST00000571714 ZNF772Q68DY9 489 aaPredicted RBP17.07■□□□□ 0.32
NPLOC4-206ENST00000571714 PPARGC1BQ86YN6 1023 aaKnown RBP17.06■□□□□ 0.32
NPLOC4-206ENST00000571714 TRIM52Q96A61 297 aa17.05■□□□□ 0.32
NPLOC4-206ENST00000571714 ZNF326Q5BKZ1 582 aaKnown RBP17.04■□□□□ 0.32
NPLOC4-206ENST00000571714 UPF1Q92900 1129 aaKnown RBP eCLIP17.04■□□□□ 0.323e-7■■□□□ 13.9
NPLOC4-206ENST00000571714 NUTM2BA6NNL0 878 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-206ENST00000571714 NUTM2EB1AL46 878 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-206ENST00000571714 NUTM2AQ8IVF1 878 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-206ENST00000571714 CDK12Q9NYV4 1490 aaPredicted RBP17.03■□□□□ 0.32
NPLOC4-206ENST00000571714 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.32
NPLOC4-206ENST00000571714 LAMC1P11047 1609 aa17.02■□□□□ 0.31
NPLOC4-206ENST00000571714 NAIPQ13075 1403 aa17.02■□□□□ 0.31
NPLOC4-206ENST00000571714 PNPLA6Q8IY17 1366 aa17.02■□□□□ 0.31
NPLOC4-206ENST00000571714 KIF1BO60333 1816 aa17.01■□□□□ 0.31
NPLOC4-206ENST00000571714 RRBP1Q9P2E9 1410 aaKnown RBP17.01■□□□□ 0.31
NPLOC4-206ENST00000571714 AFF2P51816 1311 aa17■□□□□ 0.31
NPLOC4-206ENST00000571714 PTCH1Q13635 1447 aa17■□□□□ 0.31
NPLOC4-206ENST00000571714 RXRBP28702 533 aa16.99■□□□□ 0.31
NPLOC4-206ENST00000571714 C1orf167Q5SNV9 1468 aa16.99■□□□□ 0.31
NPLOC4-206ENST00000571714 RGS12O14924 1447 aa16.98■□□□□ 0.31
NPLOC4-206ENST00000571714 PRAG1Q86YV5 1406 aa16.98■□□□□ 0.31
NPLOC4-206ENST00000571714 LRRC59Q96AG4 307 aaKnown RBP16.98■□□□□ 0.31
NPLOC4-206ENST00000571714 ROBO2Q9HCK4 1378 aa16.98■□□□□ 0.31
NPLOC4-206ENST00000571714 PPLO60437 1756 aa16.94■□□□□ 0.3
NPLOC4-206ENST00000571714 C8orf37Q96NL8 207 aa16.94■□□□□ 0.3
NPLOC4-206ENST00000571714 ORAI2Q96SN7 254 aa16.92■□□□□ 0.3
NPLOC4-206ENST00000571714 HFM1A2PYH4 1435 aa16.92■□□□□ 0.3
NPLOC4-206ENST00000571714 SOS2Q07890 1332 aaPredicted RBP16.92■□□□□ 0.3
NPLOC4-206ENST00000571714 COL22A1Q8NFW1 1626 aaPredicted RBP16.92■□□□□ 0.3
NPLOC4-206ENST00000571714 CDC42BPGQ6DT37 1551 aa16.89■□□□□ 0.3
NPLOC4-206ENST00000571714 VGFO15240 615 aaPredicted RBP16.89■□□□□ 0.29
NPLOC4-206ENST00000571714 RBM6P78332 1123 aaKnown RBP16.89■□□□□ 0.29
NPLOC4-206ENST00000571714 QTRT2Q9H974 415 aaKnown RBP16.89■□□□□ 0.29
NPLOC4-206ENST00000571714 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
NPLOC4-206ENST00000571714 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
NPLOC4-206ENST00000571714 MYOM2P54296 1465 aa16.86■□□□□ 0.29
NPLOC4-206ENST00000571714 PXDNQ92626 1479 aa16.86■□□□□ 0.29
NPLOC4-206ENST00000571714 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms