RNA–Protein interactions for RNA: ENST00000570451.5

RPA1-202, Transcript of replication protein A1, humanhuman

TSL 3

Gene RPA1, Length 630 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-202ENST00000570451 PPP1R15AO75807 674 aaPredicted RBP32.04■■■□□ 2.72
RPA1-202ENST00000570451 MYO5BQ9ULV0 1848 aa32.04■■■□□ 2.72
RPA1-202ENST00000570451 RIMS2Q9UQ26 1411 aa32.01■■■□□ 2.72
RPA1-202ENST00000570451 TMEM131LA2VDJ0 1609 aa32■■■□□ 2.71
RPA1-202ENST00000570451 ZFYVE9O95405 1425 aa32■■■□□ 2.71
RPA1-202ENST00000570451 KCNA6P17658 529 aa31.99■■■□□ 2.71
RPA1-202ENST00000570451 HDGFP51858 240 aaKnown RBP31.98■■■□□ 2.71
RPA1-202ENST00000570451 XIRP1Q702N8 1843 aaKnown RBP31.98■■■□□ 2.71
RPA1-202ENST00000570451 RRBP1Q9P2E9 1410 aaKnown RBP31.97■■■□□ 2.71
RPA1-202ENST00000570451 TMEM94Q12767 1356 aa31.95■■■□□ 2.71
RPA1-202ENST00000570451 PLEKHG1Q9ULL1 1385 aa31.95■■■□□ 2.71
RPA1-202ENST00000570451 PROSER2Q86WR7 435 aaPredicted RBP31.95■■■□□ 2.71
RPA1-202ENST00000570451 RBM33Q96EV2 1170 aaKnown RBP31.93■■■□□ 2.7
RPA1-202ENST00000570451 NUTM2DQ5VT03 806 aaPredicted RBP31.92■■■□□ 2.7
RPA1-202ENST00000570451 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.92■■■□□ 2.7
RPA1-202ENST00000570451 NWD1Q149M9 1564 aa31.88■■■□□ 2.69
RPA1-202ENST00000570451 MED1Q15648 1581 aaPredicted RBP31.87■■■□□ 2.69
RPA1-202ENST00000570451 NKTRP30414 1462 aaKnown RBP31.87■■■□□ 2.69
RPA1-202ENST00000570451 NAIPQ13075 1403 aa31.83■■■□□ 2.69
RPA1-202ENST00000570451 SOCS7O14512 581 aa31.82■■■□□ 2.68
RPA1-202ENST00000570451 SPHKAPQ2M3C7 1700 aa31.82■■■□□ 2.68
RPA1-202ENST00000570451 TBX22Q9Y458 520 aa31.8■■■□□ 2.68
RPA1-202ENST00000570451 CHD2O14647 1828 aaKnown RBP31.79■■■□□ 2.68
RPA1-202ENST00000570451 MSH6P52701 1360 aa31.78■■■□□ 2.68
RPA1-202ENST00000570451 ZNF326Q5BKZ1 582 aaKnown RBP31.77■■■□□ 2.68
RPA1-202ENST00000570451 ADAMTS13Q76LX8 1427 aa31.76■■■□□ 2.68
RPA1-202ENST00000570451 FAM135BQ49AJ0 1406 aa31.75■■■□□ 2.67
RPA1-202ENST00000570451 TRIM52Q96A61 297 aa31.75■■■□□ 2.67
RPA1-202ENST00000570451 DIP2AQ14689 1571 aa31.74■■■□□ 2.67
RPA1-202ENST00000570451 PHF23Q9BUL5 403 aaPredicted RBP31.74■■■□□ 2.67
RPA1-202ENST00000570451 HFM1A2PYH4 1435 aa31.72■■■□□ 2.67
RPA1-202ENST00000570451 C14orf37Q86TY3 774 aa31.71■■■□□ 2.67
RPA1-202ENST00000570451 ROBO1Q9Y6N7 1651 aa31.7■■■□□ 2.67
RPA1-202ENST00000570451 CLTCL1P53675 1640 aa31.68■■■□□ 2.66
RPA1-202ENST00000570451 TRPM2O94759 1503 aa31.68■■■□□ 2.66
RPA1-202ENST00000570451 PIK3R4Q99570 1358 aa31.68■■■□□ 2.66
RPA1-202ENST00000570451 SLAIN2Q9P270 581 aa31.66■■■□□ 2.66
RPA1-202ENST00000570451 AMOTL2Q9Y2J4 779 aa31.64■■■□□ 2.66
RPA1-202ENST00000570451 SLC4A1APQ9BWU0 796 aaKnown RBP31.62■■■□□ 2.65
RPA1-202ENST00000570451 PTPRUQ92729 1446 aa31.61■■■□□ 2.65
RPA1-202ENST00000570451 NCOA3Q9Y6Q9 1424 aa31.61■■■□□ 2.65
RPA1-202ENST00000570451 NRXN3Q9Y4C0 1643 aa31.6■■■□□ 2.65
RPA1-202ENST00000570451 SETBP1Q9Y6X0 1596 aa31.6■■■□□ 2.65
RPA1-202ENST00000570451 KIF1BO60333 1816 aa31.59■■■□□ 2.65
RPA1-202ENST00000570451 NEXMIFQ5QGS0 1516 aa31.57■■■□□ 2.64
RPA1-202ENST00000570451 ATF3P18847 181 aa31.55■■■□□ 2.64
RPA1-202ENST00000570451 C19orf44Q9H6X5 657 aa31.55■■■□□ 2.64
RPA1-202ENST00000570451 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.53■■■□□ 2.64
RPA1-202ENST00000570451 CADPS2Q86UW7 1296 aa31.53■■■□□ 2.64
RPA1-202ENST00000570451 METP08581 1390 aa31.53■■■□□ 2.64
RPA1-202ENST00000570451 PHLPP1O60346 1717 aa31.52■■■□□ 2.64
RPA1-202ENST00000570451 XRN1Q8IZH2 1706 aaKnown RBP31.5■■■□□ 2.63
RPA1-202ENST00000570451 FOXD1Q16676 465 aa31.49■■■□□ 2.63
RPA1-202ENST00000570451 VGFO15240 615 aaPredicted RBP31.44■■■□□ 2.62
RPA1-202ENST00000570451 JCADQ9P266 1359 aa31.42■■■□□ 2.62
RPA1-202ENST00000570451 RGS17Q9UGC6 210 aaPredicted RBP31.41■■■□□ 2.62
RPA1-202ENST00000570451 RPGRIP1LQ68CZ1 1315 aa31.41■■■□□ 2.62
RPA1-202ENST00000570451 DCCP43146 1447 aa31.4■■■□□ 2.62
RPA1-202ENST00000570451 COL16A1Q07092 1604 aaPredicted RBP31.39■■■□□ 2.62
RPA1-202ENST00000570451 MPHOSPH9Q99550 1183 aa31.38■■■□□ 2.61
RPA1-202ENST00000570451 CCDC144AA2RUR9 1427 aa31.36■■■□□ 2.61
RPA1-202ENST00000570451 BRINP3Q76B58 766 aa31.36■■■□□ 2.61
RPA1-202ENST00000570451 PPLO60437 1756 aa31.35■■■□□ 2.61
RPA1-202ENST00000570451 AHDC1Q5TGY3 1603 aaPredicted RBP31.35■■■□□ 2.61
RPA1-202ENST00000570451 ADGRL3Q9HAR2 1447 aa31.33■■■□□ 2.61
RPA1-202ENST00000570451 MST1RQ04912 1400 aa31.32■■■□□ 2.6
RPA1-202ENST00000570451 RGL3Q3MIN7 710 aa31.31■■■□□ 2.6
RPA1-202ENST00000570451 SETD1AO15047 1707 aaKnown RBP31.31■■■□□ 2.6
RPA1-202ENST00000570451 NALCNQ8IZF0 1738 aa31.29■■■□□ 2.6
RPA1-202ENST00000570451 ASXL1Q8IXJ9 1541 aa31.29■■■□□ 2.6
RPA1-202ENST00000570451 PTCH1Q13635 1447 aa31.28■■■□□ 2.6
RPA1-202ENST00000570451 SETD5Q9C0A6 1442 aa31.28■■■□□ 2.6
RPA1-202ENST00000570451 POTEAQ6S8J7 498 aa31.27■■■□□ 2.6
RPA1-202ENST00000570451 ROBO2Q9HCK4 1378 aa31.27■■■□□ 2.6
RPA1-202ENST00000570451 MEX3CQ5U5Q3 659 aaKnown RBP31.25■■■□□ 2.59
RPA1-202ENST00000570451 SPATA31A6Q5VVP1 1343 aa31.24■■■□□ 2.59
RPA1-202ENST00000570451 ADGRF5Q8IZF2 1346 aa31.24■■■□□ 2.59
RPA1-202ENST00000570451 SPATA31E1Q6ZUB1 1445 aa31.23■■■□□ 2.59
RPA1-202ENST00000570451 SHPRHQ149N8 1683 aa31.22■■■□□ 2.59
RPA1-202ENST00000570451 ACIN1Q9UKV3 1341 aaKnown RBP31.22■■■□□ 2.59
RPA1-202ENST00000570451 LRP6O75581 1613 aa31.21■■■□□ 2.59
RPA1-202ENST00000570451 ANKRD30BQ9BXX2 1392 aa31.19■■■□□ 2.58
RPA1-202ENST00000570451 DDX17Q92841 729 aaKnown RBP31.19■■■□□ 2.58
RPA1-202ENST00000570451 NHSL1Q5SYE7 1610 aa31.17■■■□□ 2.58
RPA1-202ENST00000570451 PRAG1Q86YV5 1406 aa31.17■■■□□ 2.58
RPA1-202ENST00000570451 C1orf167Q5SNV9 1468 aa31.17■■■□□ 2.58
RPA1-202ENST00000570451 NUTM2BA6NNL0 878 aaPredicted RBP31.17■■■□□ 2.58
RPA1-202ENST00000570451 NUTM2EB1AL46 878 aaPredicted RBP31.17■■■□□ 2.58
RPA1-202ENST00000570451 NUTM2AQ8IVF1 878 aaPredicted RBP31.17■■■□□ 2.58
RPA1-202ENST00000570451 RAB3GAP2Q9H2M9 1393 aa31.17■■■□□ 2.58
RPA1-202ENST00000570451 IFT172Q9UG01 1749 aa31.15■■■□□ 2.58
RPA1-202ENST00000570451 STK26Q9P289 416 aa31.15■■■□□ 2.58
RPA1-202ENST00000570451 LRRC59Q96AG4 307 aaKnown RBP31.13■■■□□ 2.57
RPA1-202ENST00000570451 ORAI2Q96SN7 254 aa31.1■■■□□ 2.57
RPA1-202ENST00000570451 TMEM132EQ6IEE7 984 aa31.09■■■□□ 2.57
RPA1-202ENST00000570451 PIK3C2GO75747 1445 aa31.08■■■□□ 2.57
RPA1-202ENST00000570451 LRPPRCP42704 1394 aaKnown RBP31.06■■■□□ 2.56
RPA1-202ENST00000570451 ZNF772Q68DY9 489 aaPredicted RBP31.06■■■□□ 2.56
RPA1-202ENST00000570451 WAPLQ7Z5K2 1190 aa31.06■■■□□ 2.56
RPA1-202ENST00000570451 PNPLA6Q8IY17 1366 aa31.04■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms