RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 KCNA6P17658 529 aa28.86■■■□□ 2.21
SPSB3-210ENST00000568416 RIMS2Q9UQ26 1411 aa28.85■■■□□ 2.21
SPSB3-210ENST00000568416 PLEKHG1Q9ULL1 1385 aa28.83■■■□□ 2.21
SPSB3-210ENST00000568416 XIRP1Q702N8 1843 aaKnown RBP28.81■■■□□ 2.2
SPSB3-210ENST00000568416 HDGFP51858 240 aaKnown RBP28.81■■■□□ 2.2
SPSB3-210ENST00000568416 NWD1Q149M9 1564 aa28.79■■■□□ 2.2
SPSB3-210ENST00000568416 TMEM94Q12767 1356 aa28.79■■■□□ 2.2
SPSB3-210ENST00000568416 MYO5BQ9ULV0 1848 aa28.79■■■□□ 2.2
SPSB3-210ENST00000568416 CHGAP10645 457 aaKnown RBP28.79■■■□□ 2.2
SPSB3-210ENST00000568416 BCANQ96GW7 911 aa28.78■■■□□ 2.2
SPSB3-210ENST00000568416 PPP1R15AO75807 674 aaPredicted RBP28.77■■■□□ 2.2
SPSB3-210ENST00000568416 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.76■■■□□ 2.19
SPSB3-210ENST00000568416 NKTRP30414 1462 aaKnown RBP28.76■■■□□ 2.19
SPSB3-210ENST00000568416 PROSER2Q86WR7 435 aaPredicted RBP28.74■■■□□ 2.19
SPSB3-210ENST00000568416 NAIPQ13075 1403 aa28.73■■■□□ 2.19
SPSB3-210ENST00000568416 SENP3Q9H4L4 574 aaPredicted RBP28.73■■■□□ 2.19
SPSB3-210ENST00000568416 MED1Q15648 1581 aaPredicted RBP28.72■■■□□ 2.19
SPSB3-210ENST00000568416 TBX22Q9Y458 520 aa28.71■■■□□ 2.19
SPSB3-210ENST00000568416 RBM33Q96EV2 1170 aaKnown RBP28.7■■■□□ 2.18
SPSB3-210ENST00000568416 ADAMTS13Q76LX8 1427 aa28.69■■■□□ 2.18
SPSB3-210ENST00000568416 NUTM2DQ5VT03 806 aaPredicted RBP28.68■■■□□ 2.18
SPSB3-210ENST00000568416 FAM135BQ49AJ0 1406 aa28.68■■■□□ 2.18
SPSB3-210ENST00000568416 SOCS7O14512 581 aa28.67■■■□□ 2.18
SPSB3-210ENST00000568416 SPHKAPQ2M3C7 1700 aa28.66■■■□□ 2.18
SPSB3-210ENST00000568416 CHD2O14647 1828 aaKnown RBP28.64■■■□□ 2.18
SPSB3-210ENST00000568416 DIP2AQ14689 1571 aa28.64■■■□□ 2.18
SPSB3-210ENST00000568416 HFM1A2PYH4 1435 aa28.63■■■□□ 2.17
SPSB3-210ENST00000568416 PIK3R4Q99570 1358 aa28.62■■■□□ 2.17
SPSB3-210ENST00000568416 MSH6P52701 1360 aa28.61■■■□□ 2.17
SPSB3-210ENST00000568416 NCOA3Q9Y6Q9 1424 aa28.58■■■□□ 2.17
SPSB3-210ENST00000568416 TRPM2O94759 1503 aa28.58■■■□□ 2.17
SPSB3-210ENST00000568416 CLTCL1P53675 1640 aa28.55■■■□□ 2.16
SPSB3-210ENST00000568416 ROBO1Q9Y6N7 1651 aa28.54■■■□□ 2.16
SPSB3-210ENST00000568416 ZNF326Q5BKZ1 582 aaKnown RBP28.53■■■□□ 2.16
SPSB3-210ENST00000568416 SETBP1Q9Y6X0 1596 aa28.53■■■□□ 2.16
SPSB3-210ENST00000568416 PTPRUQ92729 1446 aa28.52■■■□□ 2.16
SPSB3-210ENST00000568416 NRXN3Q9Y4C0 1643 aa28.52■■■□□ 2.16
SPSB3-210ENST00000568416 TRIM52Q96A61 297 aa28.52■■■□□ 2.16
SPSB3-210ENST00000568416 SLAIN2Q9P270 581 aa28.52■■■□□ 2.16
SPSB3-210ENST00000568416 AMOTL2Q9Y2J4 779 aa28.5■■■□□ 2.15
SPSB3-210ENST00000568416 PHF23Q9BUL5 403 aaPredicted RBP28.49■■■□□ 2.15
SPSB3-210ENST00000568416 NEXMIFQ5QGS0 1516 aa28.48■■■□□ 2.15
SPSB3-210ENST00000568416 SLC4A1APQ9BWU0 796 aaKnown RBP28.46■■■□□ 2.15
SPSB3-210ENST00000568416 C14orf37Q86TY3 774 aa28.45■■■□□ 2.14
SPSB3-210ENST00000568416 C19orf44Q9H6X5 657 aa28.44■■■□□ 2.14
SPSB3-210ENST00000568416 XRN1Q8IZH2 1706 aaKnown RBP28.43■■■□□ 2.14
SPSB3-210ENST00000568416 METP08581 1390 aa28.42■■■□□ 2.14
SPSB3-210ENST00000568416 CADPS2Q86UW7 1296 aa28.41■■■□□ 2.14
SPSB3-210ENST00000568416 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.4■■■□□ 2.14
SPSB3-210ENST00000568416 KIF1BO60333 1816 aa28.4■■■□□ 2.14
SPSB3-210ENST00000568416 ATF3P18847 181 aa28.38■■■□□ 2.13
SPSB3-210ENST00000568416 PHLPP1O60346 1717 aa28.35■■■□□ 2.13
SPSB3-210ENST00000568416 RGS17Q9UGC6 210 aaPredicted RBP28.35■■■□□ 2.13
SPSB3-210ENST00000568416 RPGRIP1LQ68CZ1 1315 aa28.35■■■□□ 2.13
SPSB3-210ENST00000568416 DCCP43146 1447 aa28.35■■■□□ 2.13
SPSB3-210ENST00000568416 VGFO15240 615 aaPredicted RBP28.34■■■□□ 2.13
SPSB3-210ENST00000568416 FOXD1Q16676 465 aa28.32■■■□□ 2.12
SPSB3-210ENST00000568416 JCADQ9P266 1359 aa28.32■■■□□ 2.12
SPSB3-210ENST00000568416 COL16A1Q07092 1604 aaPredicted RBP28.32■■■□□ 2.12
SPSB3-210ENST00000568416 AHDC1Q5TGY3 1603 aaPredicted RBP28.29■■■□□ 2.12
SPSB3-210ENST00000568416 MPHOSPH9Q99550 1183 aa28.28■■■□□ 2.12
SPSB3-210ENST00000568416 BRINP3Q76B58 766 aa28.27■■■□□ 2.12
SPSB3-210ENST00000568416 ADGRL3Q9HAR2 1447 aa28.26■■■□□ 2.12
SPSB3-210ENST00000568416 SETD1AO15047 1707 aaKnown RBP28.26■■■□□ 2.12
SPSB3-210ENST00000568416 MST1RQ04912 1400 aa28.26■■■□□ 2.11
SPSB3-210ENST00000568416 CCDC144AA2RUR9 1427 aa28.24■■■□□ 2.11
SPSB3-210ENST00000568416 PPLO60437 1756 aa28.24■■■□□ 2.11
SPSB3-210ENST00000568416 PTCH1Q13635 1447 aa28.23■■■□□ 2.11
SPSB3-210ENST00000568416 PRAG1Q86YV5 1406 aa28.22■■■□□ 2.11
SPSB3-210ENST00000568416 SPATA31E1Q6ZUB1 1445 aa28.21■■■□□ 2.11
SPSB3-210ENST00000568416 ASXL1Q8IXJ9 1541 aa28.21■■■□□ 2.11
SPSB3-210ENST00000568416 ACIN1Q9UKV3 1341 aaKnown RBP28.19■■■□□ 2.1
SPSB3-210ENST00000568416 SETD5Q9C0A6 1442 aa28.19■■■□□ 2.1
SPSB3-210ENST00000568416 NALCNQ8IZF0 1738 aa28.19■■■□□ 2.1
SPSB3-210ENST00000568416 ROBO2Q9HCK4 1378 aa28.19■■■□□ 2.1
SPSB3-210ENST00000568416 SPATA31A6Q5VVP1 1343 aa28.18■■■□□ 2.1
SPSB3-210ENST00000568416 POTEAQ6S8J7 498 aa28.18■■■□□ 2.1
SPSB3-210ENST00000568416 ADGRF5Q8IZF2 1346 aa28.16■■■□□ 2.1
SPSB3-210ENST00000568416 LRP6O75581 1613 aa28.15■■■□□ 2.1
SPSB3-210ENST00000568416 SHPRHQ149N8 1683 aa28.14■■■□□ 2.1
SPSB3-210ENST00000568416 RGL3Q3MIN7 710 aa28.14■■■□□ 2.1
SPSB3-210ENST00000568416 ANKRD30BQ9BXX2 1392 aa28.13■■■□□ 2.09
SPSB3-210ENST00000568416 NHSL1Q5SYE7 1610 aa28.12■■■□□ 2.09
SPSB3-210ENST00000568416 C1orf167Q5SNV9 1468 aa28.11■■■□□ 2.09
SPSB3-210ENST00000568416 IFT172Q9UG01 1749 aa28.1■■■□□ 2.09
SPSB3-210ENST00000568416 RAB3GAP2Q9H2M9 1393 aa28.09■■■□□ 2.09
SPSB3-210ENST00000568416 DDX17Q92841 729 aaKnown RBP28.06■■■□□ 2.08
SPSB3-210ENST00000568416 PIK3C2GO75747 1445 aa28.05■■■□□ 2.08
SPSB3-210ENST00000568416 LRRC59Q96AG4 307 aaKnown RBP28.05■■■□□ 2.08
SPSB3-210ENST00000568416 TECPR2O15040 1411 aa28.04■■■□□ 2.08
SPSB3-210ENST00000568416 MEX3CQ5U5Q3 659 aaKnown RBP28.04■■■□□ 2.08
SPSB3-210ENST00000568416 LRPPRCP42704 1394 aaKnown RBP28.02■■■□□ 2.08
SPSB3-210ENST00000568416 ORAI2Q96SN7 254 aa28.01■■■□□ 2.07
SPSB3-210ENST00000568416 LAMC1P11047 1609 aa28■■■□□ 2.07
SPSB3-210ENST00000568416 ABCC11Q96J66 1382 aa27.99■■■□□ 2.07
SPSB3-210ENST00000568416 NUTM2BA6NNL0 878 aaPredicted RBP27.99■■■□□ 2.07
SPSB3-210ENST00000568416 NUTM2EB1AL46 878 aaPredicted RBP27.99■■■□□ 2.07
SPSB3-210ENST00000568416 NUTM2AQ8IVF1 878 aaPredicted RBP27.99■■■□□ 2.07
SPSB3-210ENST00000568416 CDC42BPGQ6DT37 1551 aa27.99■■■□□ 2.07
SPSB3-210ENST00000568416 PNPLA6Q8IY17 1366 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms