RNA–Protein interactions for RNA: ENST00000566239.1

HACD3-208, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

TSL 2

Gene HACD3, Length 393 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-208ENST00000566239 BCANQ96GW7 911 aa20.36■□□□□ 0.85
HACD3-208ENST00000566239 SLC26A8Q96RN1 970 aa20.36■□□□□ 0.85
HACD3-208ENST00000566239 NWD1Q149M9 1564 aa20.36■□□□□ 0.85
HACD3-208ENST00000566239 NUP155O75694 1391 aa20.35■□□□□ 0.85
HACD3-208ENST00000566239 MED1Q15648 1581 aaPredicted RBP20.35■□□□□ 0.85
HACD3-208ENST00000566239 SPHKAPQ2M3C7 1700 aa20.35■□□□□ 0.85
HACD3-208ENST00000566239 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
HACD3-208ENST00000566239 KCNA6P17658 529 aa20.34■□□□□ 0.85
HACD3-208ENST00000566239 RIMS2Q9UQ26 1411 aa20.34■□□□□ 0.85
HACD3-208ENST00000566239 NKTRP30414 1462 aaKnown RBP20.33■□□□□ 0.85
HACD3-208ENST00000566239 PPP1R15AO75807 674 aaPredicted RBP20.33■□□□□ 0.85
HACD3-208ENST00000566239 CHGAP10645 457 aaKnown RBP20.32■□□□□ 0.84
HACD3-208ENST00000566239 PLEKHG1Q9ULL1 1385 aa20.32■□□□□ 0.84
HACD3-208ENST00000566239 RRBP1Q9P2E9 1410 aaKnown RBP20.3■□□□□ 0.84
HACD3-208ENST00000566239 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.84
HACD3-208ENST00000566239 TMEM94Q12767 1356 aa20.3■□□□□ 0.84
HACD3-208ENST00000566239 SOCS7O14512 581 aa20.29■□□□□ 0.84
HACD3-208ENST00000566239 PROSER2Q86WR7 435 aaPredicted RBP20.29■□□□□ 0.84
HACD3-208ENST00000566239 DIP2AQ14689 1571 aa20.27■□□□□ 0.84
HACD3-208ENST00000566239 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
HACD3-208ENST00000566239 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
HACD3-208ENST00000566239 KIF1BO60333 1816 aa20.25■□□□□ 0.83
HACD3-208ENST00000566239 FAM135BQ49AJ0 1406 aa20.23■□□□□ 0.83
HACD3-208ENST00000566239 TBX22Q9Y458 520 aa20.23■□□□□ 0.83
HACD3-208ENST00000566239 MSH6P52701 1360 aa20.22■□□□□ 0.83
HACD3-208ENST00000566239 RBM33Q96EV2 1170 aaKnown RBP20.21■□□□□ 0.83
HACD3-208ENST00000566239 TRPM2O94759 1503 aa20.21■□□□□ 0.83
HACD3-208ENST00000566239 NAIPQ13075 1403 aa20.2■□□□□ 0.82
HACD3-208ENST00000566239 NUTM2DQ5VT03 806 aaPredicted RBP20.2■□□□□ 0.82
HACD3-208ENST00000566239 PHF23Q9BUL5 403 aaPredicted RBP20.2■□□□□ 0.82
HACD3-208ENST00000566239 ADAMTS13Q76LX8 1427 aa20.19■□□□□ 0.82
HACD3-208ENST00000566239 PIK3R4Q99570 1358 aa20.19■□□□□ 0.82
HACD3-208ENST00000566239 CLTCL1P53675 1640 aa20.18■□□□□ 0.82
HACD3-208ENST00000566239 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
HACD3-208ENST00000566239 PHLPP1O60346 1717 aa20.16■□□□□ 0.82
HACD3-208ENST00000566239 NRXN3Q9Y4C0 1643 aa20.16■□□□□ 0.82
HACD3-208ENST00000566239 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.16■□□□□ 0.82
HACD3-208ENST00000566239 ZNF326Q5BKZ1 582 aaKnown RBP20.15■□□□□ 0.82
HACD3-208ENST00000566239 HFM1A2PYH4 1435 aa20.15■□□□□ 0.82
HACD3-208ENST00000566239 SETBP1Q9Y6X0 1596 aa20.15■□□□□ 0.82
HACD3-208ENST00000566239 C14orf37Q86TY3 774 aa20.13■□□□□ 0.81
HACD3-208ENST00000566239 SLAIN2Q9P270 581 aa20.12■□□□□ 0.81
HACD3-208ENST00000566239 XRN1Q8IZH2 1706 aaKnown RBP20.11■□□□□ 0.81
HACD3-208ENST00000566239 TRIM52Q96A61 297 aa20.11■□□□□ 0.81
HACD3-208ENST00000566239 NEXMIFQ5QGS0 1516 aa20.11■□□□□ 0.81
HACD3-208ENST00000566239 AMOTL2Q9Y2J4 779 aa20.09■□□□□ 0.81
HACD3-208ENST00000566239 CADPS2Q86UW7 1296 aa20.07■□□□□ 0.8
HACD3-208ENST00000566239 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
HACD3-208ENST00000566239 PTPRUQ92729 1446 aa20.07■□□□□ 0.8
HACD3-208ENST00000566239 ATF3P18847 181 aa20.06■□□□□ 0.8
HACD3-208ENST00000566239 PPLO60437 1756 aa20.05■□□□□ 0.8
HACD3-208ENST00000566239 COL16A1Q07092 1604 aaPredicted RBP20.05■□□□□ 0.8
HACD3-208ENST00000566239 SLC4A1APQ9BWU0 796 aaKnown RBP20.04■□□□□ 0.8
HACD3-208ENST00000566239 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.79
HACD3-208ENST00000566239 DCCP43146 1447 aa20.02■□□□□ 0.79
HACD3-208ENST00000566239 JCADQ9P266 1359 aa20.01■□□□□ 0.79
HACD3-208ENST00000566239 AHDC1Q5TGY3 1603 aaPredicted RBP20.01■□□□□ 0.79
HACD3-208ENST00000566239 METP08581 1390 aa20■□□□□ 0.79
HACD3-208ENST00000566239 NALCNQ8IZF0 1738 aa20■□□□□ 0.79
HACD3-208ENST00000566239 VGFO15240 615 aaPredicted RBP19.99■□□□□ 0.79
HACD3-208ENST00000566239 SHPRHQ149N8 1683 aa19.99■□□□□ 0.79
HACD3-208ENST00000566239 RPGRIP1LQ68CZ1 1315 aa19.98■□□□□ 0.79
HACD3-208ENST00000566239 RGS17Q9UGC6 210 aaPredicted RBP19.96■□□□□ 0.79
HACD3-208ENST00000566239 NHSL1Q5SYE7 1610 aa19.94■□□□□ 0.78
HACD3-208ENST00000566239 ADGRL3Q9HAR2 1447 aa19.94■□□□□ 0.78
HACD3-208ENST00000566239 IFT172Q9UG01 1749 aa19.94■□□□□ 0.78
HACD3-208ENST00000566239 ASXL1Q8IXJ9 1541 aa19.93■□□□□ 0.78
HACD3-208ENST00000566239 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
HACD3-208ENST00000566239 MST1RQ04912 1400 aa19.93■□□□□ 0.78
HACD3-208ENST00000566239 BRINP3Q76B58 766 aa19.92■□□□□ 0.78
HACD3-208ENST00000566239 SPATA31A6Q5VVP1 1343 aa19.92■□□□□ 0.78
HACD3-208ENST00000566239 ACIN1Q9UKV3 1341 aaKnown RBP19.92■□□□□ 0.78
HACD3-208ENST00000566239 PTCH1Q13635 1447 aa19.91■□□□□ 0.78
HACD3-208ENST00000566239 FOXD1Q16676 465 aa19.9■□□□□ 0.78
HACD3-208ENST00000566239 MPHOSPH9Q99550 1183 aa19.89■□□□□ 0.77
HACD3-208ENST00000566239 PRAG1Q86YV5 1406 aa19.87■□□□□ 0.77
HACD3-208ENST00000566239 POTEAQ6S8J7 498 aa19.87■□□□□ 0.77
HACD3-208ENST00000566239 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
HACD3-208ENST00000566239 LRP6O75581 1613 aa19.86■□□□□ 0.77
HACD3-208ENST00000566239 SPATA31E1Q6ZUB1 1445 aa19.84■□□□□ 0.77
HACD3-208ENST00000566239 SETD5Q9C0A6 1442 aa19.84■□□□□ 0.77
HACD3-208ENST00000566239 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.77
HACD3-208ENST00000566239 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.77
HACD3-208ENST00000566239 RGL3Q3MIN7 710 aa19.83■□□□□ 0.77
HACD3-208ENST00000566239 LAMC1P11047 1609 aa19.83■□□□□ 0.76
HACD3-208ENST00000566239 KNDC1Q76NI1 1749 aa19.82■□□□□ 0.76
HACD3-208ENST00000566239 C1orf167Q5SNV9 1468 aa19.81■□□□□ 0.76
HACD3-208ENST00000566239 LRRC59Q96AG4 307 aaKnown RBP19.81■□□□□ 0.76
HACD3-208ENST00000566239 ADGRF5Q8IZF2 1346 aa19.79■□□□□ 0.76
HACD3-208ENST00000566239 CDC42BPGQ6DT37 1551 aa19.79■□□□□ 0.76
HACD3-208ENST00000566239 ZNF772Q68DY9 489 aaPredicted RBP19.79■□□□□ 0.76
HACD3-208ENST00000566239 NUTM2BA6NNL0 878 aaPredicted RBP19.78■□□□□ 0.76
HACD3-208ENST00000566239 NUTM2EB1AL46 878 aaPredicted RBP19.78■□□□□ 0.76
HACD3-208ENST00000566239 NUTM2AQ8IVF1 878 aaPredicted RBP19.78■□□□□ 0.76
HACD3-208ENST00000566239 PIK3C2GO75747 1445 aa19.76■□□□□ 0.75
HACD3-208ENST00000566239 RAB3GAP2Q9H2M9 1393 aa19.75■□□□□ 0.75
HACD3-208ENST00000566239 DDX17Q92841 729 aaKnown RBP19.75■□□□□ 0.75
HACD3-208ENST00000566239 TECPR2O15040 1411 aa19.75■□□□□ 0.75
HACD3-208ENST00000566239 PNPLA6Q8IY17 1366 aa19.74■□□□□ 0.75
HACD3-208ENST00000566239 LRPPRCP42704 1394 aaKnown RBP19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms