RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 SLC52A1Q9NWF4 448 aa20.07■□□□□ 0.8
RNF40-208ENST00000565995 POTEAQ6S8J7 498 aa20.05■□□□□ 0.8
RNF40-208ENST00000565995 SLC26A8Q96RN1 970 aa20.05■□□□□ 0.8
RNF40-208ENST00000565995 TMEM131LA2VDJ0 1609 aa20.05■□□□□ 0.8
RNF40-208ENST00000565995 ZFYVE9O95405 1425 aa20.03■□□□□ 0.8
RNF40-208ENST00000565995 COL16A1Q07092 1604 aaPredicted RBP20.01■□□□□ 0.79
RNF40-208ENST00000565995 MSH6P52701 1360 aa20■□□□□ 0.79
RNF40-208ENST00000565995 PLEKHG1Q9ULL1 1385 aa20■□□□□ 0.79
RNF40-208ENST00000565995 SLAIN2Q9P270 581 aa20■□□□□ 0.79
RNF40-208ENST00000565995 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
RNF40-208ENST00000565995 NCOA3Q9Y6Q9 1424 aa20■□□□□ 0.79
RNF40-208ENST00000565995 APLP2Q06481 763 aa19.99■□□□□ 0.79
RNF40-208ENST00000565995 SETD1AO15047 1707 aaKnown RBP19.99■□□□□ 0.79
RNF40-208ENST00000565995 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.98■□□□□ 0.79
RNF40-208ENST00000565995 UNC13BO14795 1591 aa19.97■□□□□ 0.79
RNF40-208ENST00000565995 RBM33Q96EV2 1170 aaKnown RBP19.97■□□□□ 0.79
RNF40-208ENST00000565995 E9PCH4 1651 aa19.97■□□□□ 0.79
RNF40-208ENST00000565995 JCADQ9P266 1359 aa19.96■□□□□ 0.79
RNF40-208ENST00000565995 SHPRHQ149N8 1683 aa19.96■□□□□ 0.79
RNF40-208ENST00000565995 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
RNF40-208ENST00000565995 TBX22Q9Y458 520 aa19.95■□□□□ 0.78
RNF40-208ENST00000565995 DIP2AQ14689 1571 aa19.95■□□□□ 0.78
RNF40-208ENST00000565995 ANKRD50Q9ULJ7 1429 aa19.94■□□□□ 0.78
RNF40-208ENST00000565995 RIMS2Q9UQ26 1411 aa19.94■□□□□ 0.78
RNF40-208ENST00000565995 AHDC1Q5TGY3 1603 aaPredicted RBP19.92■□□□□ 0.78
RNF40-208ENST00000565995 IQGAP3Q86VI3 1631 aa19.91■□□□□ 0.78
RNF40-208ENST00000565995 PIK3R4Q99570 1358 aa19.9■□□□□ 0.78
RNF40-208ENST00000565995 ADAMTS13Q76LX8 1427 aa19.9■□□□□ 0.78
RNF40-208ENST00000565995 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.89■□□□□ 0.77
RNF40-208ENST00000565995 BCANQ96GW7 911 aa19.89■□□□□ 0.77
RNF40-208ENST00000565995 SPATA31A6Q5VVP1 1343 aa19.87■□□□□ 0.77
RNF40-208ENST00000565995 LRP6O75581 1613 aa19.87■□□□□ 0.77
RNF40-208ENST00000565995 C19orf44Q9H6X5 657 aa19.85■□□□□ 0.77
RNF40-208ENST00000565995 PPP1R15AO75807 674 aaPredicted RBP19.84■□□□□ 0.77
RNF40-208ENST00000565995 CADPS2Q86UW7 1296 aa19.84■□□□□ 0.77
RNF40-208ENST00000565995 TRPM2O94759 1503 aa19.84■□□□□ 0.77
RNF40-208ENST00000565995 NRXN3Q9Y4C0 1643 aa19.83■□□□□ 0.76
RNF40-208ENST00000565995 XRN1Q8IZH2 1706 aaKnown RBP19.82■□□□□ 0.76
RNF40-208ENST00000565995 NHSL1Q5SYE7 1610 aa19.82■□□□□ 0.76
RNF40-208ENST00000565995 FAM50AQ14320 339 aaKnown RBP19.81■□□□□ 0.76
RNF40-208ENST00000565995 ROCK1Q13464 1354 aa19.81■□□□□ 0.76
RNF40-208ENST00000565995 SPHKAPQ2M3C7 1700 aa19.8■□□□□ 0.76
RNF40-208ENST00000565995 ZNF772Q68DY9 489 aaPredicted RBP19.8■□□□□ 0.76
RNF40-208ENST00000565995 DCCP43146 1447 aa19.79■□□□□ 0.76
RNF40-208ENST00000565995 SETBP1Q9Y6X0 1596 aa19.78■□□□□ 0.76
RNF40-208ENST00000565995 PTPRUQ92729 1446 aa19.78■□□□□ 0.76
RNF40-208ENST00000565995 ATF3P18847 181 aa19.78■□□□□ 0.76
RNF40-208ENST00000565995 CDK12Q9NYV4 1490 aaPredicted RBP19.76■□□□□ 0.75
RNF40-208ENST00000565995 UPF1Q92900 1129 aaKnown RBP eCLIP19.76■□□□□ 0.75
RNF40-208ENST00000565995 AMOTL2Q9Y2J4 779 aa19.76■□□□□ 0.75
RNF40-208ENST00000565995 CHGAP10645 457 aaKnown RBP19.75■□□□□ 0.75
RNF40-208ENST00000565995 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
RNF40-208ENST00000565995 NUTM2DQ5VT03 806 aaPredicted RBP19.74■□□□□ 0.75
RNF40-208ENST00000565995 BRINP3Q76B58 766 aa19.74■□□□□ 0.75
RNF40-208ENST00000565995 SETD5Q9C0A6 1442 aa19.74■□□□□ 0.75
RNF40-208ENST00000565995 ASXL1Q8IXJ9 1541 aa19.73■□□□□ 0.75
RNF40-208ENST00000565995 KIF1BO60333 1816 aa19.72■□□□□ 0.75
RNF40-208ENST00000565995 MEX3CQ5U5Q3 659 aaKnown RBP19.72■□□□□ 0.75
RNF40-208ENST00000565995 LAMC1P11047 1609 aa19.72■□□□□ 0.75
RNF40-208ENST00000565995 NALCNQ8IZF0 1738 aa19.71■□□□□ 0.75
RNF40-208ENST00000565995 MST1RQ04912 1400 aa19.7■□□□□ 0.74
RNF40-208ENST00000565995 NUP155O75694 1391 aa19.7■□□□□ 0.74
RNF40-208ENST00000565995 RXRBP28702 533 aa19.69■□□□□ 0.74
RNF40-208ENST00000565995 TRIM52Q96A61 297 aa19.66■□□□□ 0.74
RNF40-208ENST00000565995 LRRC59Q96AG4 307 aaKnown RBP19.65■□□□□ 0.74
RNF40-208ENST00000565995 NEXMIFQ5QGS0 1516 aa19.65■□□□□ 0.74
RNF40-208ENST00000565995 METP08581 1390 aa19.64■□□□□ 0.73
RNF40-208ENST00000565995 ADGRL3Q9HAR2 1447 aa19.64■□□□□ 0.73
RNF40-208ENST00000565995 CLTCL1P53675 1640 aa19.64■□□□□ 0.73
RNF40-208ENST00000565995 AFF2P51816 1311 aa19.63■□□□□ 0.73
RNF40-208ENST00000565995 NUTM2BA6NNL0 878 aaPredicted RBP19.61■□□□□ 0.73
RNF40-208ENST00000565995 NUTM2EB1AL46 878 aaPredicted RBP19.61■□□□□ 0.73
RNF40-208ENST00000565995 NUTM2AQ8IVF1 878 aaPredicted RBP19.61■□□□□ 0.73
RNF40-208ENST00000565995 PNPLA6Q8IY17 1366 aa19.6■□□□□ 0.73
RNF40-208ENST00000565995 MARF1Q9Y4F3 1742 aaKnown RBP19.59■□□□□ 0.73
RNF40-208ENST00000565995 RBM6P78332 1123 aaKnown RBP19.57■□□□□ 0.72
RNF40-208ENST00000565995 COL22A1Q8NFW1 1626 aaPredicted RBP19.57■□□□□ 0.72
RNF40-208ENST00000565995 QTRT2Q9H974 415 aaKnown RBP19.56■□□□□ 0.72
RNF40-208ENST00000565995 PPLO60437 1756 aa19.56■□□□□ 0.72
RNF40-208ENST00000565995 RGS12O14924 1447 aa19.56■□□□□ 0.72
RNF40-208ENST00000565995 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
RNF40-208ENST00000565995 C1orf167Q5SNV9 1468 aa19.55■□□□□ 0.72
RNF40-208ENST00000565995 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
RNF40-208ENST00000565995 PTCH1Q13635 1447 aa19.54■□□□□ 0.72
RNF40-208ENST00000565995 SOS2Q07890 1332 aaPredicted RBP19.52■□□□□ 0.72
RNF40-208ENST00000565995 EP400Q96L91 3159 aa19.52■□□□□ 0.72
RNF40-208ENST00000565995 DDX17Q92841 729 aaKnown RBP19.52■□□□□ 0.72
RNF40-208ENST00000565995 C8orf37Q96NL8 207 aa19.52■□□□□ 0.72
RNF40-208ENST00000565995 SRCAPQ6ZRS2 3230 aa19.51■□□□□ 0.71
RNF40-208ENST00000565995 ITGAEP38570 1179 aa19.48■□□□□ 0.71
RNF40-208ENST00000565995 NGLY1Q96IV0 654 aa19.48■□□□□ 0.71
RNF40-208ENST00000565995 ROBO2Q9HCK4 1378 aa19.47■□□□□ 0.71
RNF40-208ENST00000565995 VGFO15240 615 aaPredicted RBP19.47■□□□□ 0.71
RNF40-208ENST00000565995 FNBP4Q8N3X1 1017 aaPredicted RBP19.47■□□□□ 0.71
RNF40-208ENST00000565995 RPGRIP1LQ68CZ1 1315 aa19.46■□□□□ 0.71
RNF40-208ENST00000565995 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.45■□□□□ 0.7
RNF40-208ENST00000565995 HFM1A2PYH4 1435 aa19.45■□□□□ 0.7
RNF40-208ENST00000565995 ORAI2Q96SN7 254 aa19.45■□□□□ 0.7
RNF40-208ENST00000565995 NAIPQ13075 1403 aa19.44■□□□□ 0.7
RNF40-208ENST00000565995 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms