RNA–Protein interactions for RNA: ENST00000565413.1

E4F1-207, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-207ENST00000565413 XIRP1Q702N8 1843 aaKnown RBP30.29■■■□□ 2.44
E4F1-207ENST00000565413 PROSER2Q86WR7 435 aaPredicted RBP30.28■■■□□ 2.44
E4F1-207ENST00000565413 TMEM94Q12767 1356 aa30.28■■■□□ 2.44
E4F1-207ENST00000565413 ITGAEP38570 1179 aa30.26■■■□□ 2.43
E4F1-207ENST00000565413 CHGAP10645 457 aaKnown RBP30.25■■■□□ 2.43
E4F1-207ENST00000565413 NKTRP30414 1462 aaKnown RBP30.24■■■□□ 2.43
E4F1-207ENST00000565413 MYO5BQ9ULV0 1848 aa30.24■■■□□ 2.43
E4F1-207ENST00000565413 RIMS2Q9UQ26 1411 aa30.22■■■□□ 2.43
E4F1-207ENST00000565413 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.22■■■□□ 2.43
E4F1-207ENST00000565413 PLEKHG1Q9ULL1 1385 aa30.22■■■□□ 2.43
E4F1-207ENST00000565413 IQGAP3Q86VI3 1631 aa30.21■■■□□ 2.43
E4F1-207ENST00000565413 ZFYVE9O95405 1425 aa30.21■■■□□ 2.43
E4F1-207ENST00000565413 TMEM131LA2VDJ0 1609 aa30.2■■■□□ 2.43
E4F1-207ENST00000565413 E9PCH4 1651 aa30.2■■■□□ 2.42
E4F1-207ENST00000565413 NUP155O75694 1391 aa30.19■■■□□ 2.42
E4F1-207ENST00000565413 NWD1Q149M9 1564 aa30.19■■■□□ 2.42
E4F1-207ENST00000565413 FAM135BQ49AJ0 1406 aa30.18■■■□□ 2.42
E4F1-207ENST00000565413 MSH6P52701 1360 aa30.17■■■□□ 2.42
E4F1-207ENST00000565413 PPARGC1BQ86YN6 1023 aaKnown RBP30.16■■■□□ 2.42
E4F1-207ENST00000565413 RBM33Q96EV2 1170 aaKnown RBP30.14■■■□□ 2.42
E4F1-207ENST00000565413 CHD2O14647 1828 aaKnown RBP30.1■■■□□ 2.41
E4F1-207ENST00000565413 TBX22Q9Y458 520 aa30.1■■■□□ 2.41
E4F1-207ENST00000565413 ROBO1Q9Y6N7 1651 aa30.09■■■□□ 2.41
E4F1-207ENST00000565413 C14orf37Q86TY3 774 aa30.07■■■□□ 2.4
E4F1-207ENST00000565413 DIP2AQ14689 1571 aa30.07■■■□□ 2.4
E4F1-207ENST00000565413 NUTM2DQ5VT03 806 aaPredicted RBP30.06■■■□□ 2.4
E4F1-207ENST00000565413 SLAIN2Q9P270 581 aa30.04■■■□□ 2.4
E4F1-207ENST00000565413 PIK3R4Q99570 1358 aa30.02■■■□□ 2.4
E4F1-207ENST00000565413 NCOA3Q9Y6Q9 1424 aa30.01■■■□□ 2.39
E4F1-207ENST00000565413 SPHKAPQ2M3C7 1700 aa29.99■■■□□ 2.39
E4F1-207ENST00000565413 ADAMTS13Q76LX8 1427 aa29.99■■■□□ 2.39
E4F1-207ENST00000565413 TRPM2O94759 1503 aa29.98■■■□□ 2.39
E4F1-207ENST00000565413 ZNF326Q5BKZ1 582 aaKnown RBP29.98■■■□□ 2.39
E4F1-207ENST00000565413 PHLPP1O60346 1717 aa29.94■■■□□ 2.38
E4F1-207ENST00000565413 ATF3P18847 181 aa29.94■■■□□ 2.38
E4F1-207ENST00000565413 RRBP1Q9P2E9 1410 aaKnown RBP29.94■■■□□ 2.38
E4F1-207ENST00000565413 CADPS2Q86UW7 1296 aa29.93■■■□□ 2.38
E4F1-207ENST00000565413 C19orf44Q9H6X5 657 aa29.92■■■□□ 2.38
E4F1-207ENST00000565413 AMOTL2Q9Y2J4 779 aa29.91■■■□□ 2.38
E4F1-207ENST00000565413 JCADQ9P266 1359 aa29.88■■■□□ 2.37
E4F1-207ENST00000565413 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.87■■■□□ 2.37
E4F1-207ENST00000565413 RGS17Q9UGC6 210 aaPredicted RBP29.86■■■□□ 2.37
E4F1-207ENST00000565413 NAIPQ13075 1403 aa29.85■■■□□ 2.37
E4F1-207ENST00000565413 SETBP1Q9Y6X0 1596 aa29.85■■■□□ 2.37
E4F1-207ENST00000565413 TRIM52Q96A61 297 aa29.83■■■□□ 2.37
E4F1-207ENST00000565413 KIF1BO60333 1816 aa29.82■■■□□ 2.36
E4F1-207ENST00000565413 CLTCL1P53675 1640 aa29.81■■■□□ 2.36
E4F1-207ENST00000565413 PTPRUQ92729 1446 aa29.8■■■□□ 2.36
E4F1-207ENST00000565413 NRXN3Q9Y4C0 1643 aa29.79■■■□□ 2.36
E4F1-207ENST00000565413 DCCP43146 1447 aa29.79■■■□□ 2.36
E4F1-207ENST00000565413 COL16A1Q07092 1604 aaPredicted RBP29.78■■■□□ 2.36
E4F1-207ENST00000565413 XRN1Q8IZH2 1706 aaKnown RBP29.77■■■□□ 2.36
E4F1-207ENST00000565413 HFM1A2PYH4 1435 aa29.77■■■□□ 2.36
E4F1-207ENST00000565413 NEXMIFQ5QGS0 1516 aa29.75■■■□□ 2.35
E4F1-207ENST00000565413 AHDC1Q5TGY3 1603 aaPredicted RBP29.74■■■□□ 2.35
E4F1-207ENST00000565413 SPATA31A6Q5VVP1 1343 aa29.74■■■□□ 2.35
E4F1-207ENST00000565413 MEX3CQ5U5Q3 659 aaKnown RBP29.74■■■□□ 2.35
E4F1-207ENST00000565413 POTEAQ6S8J7 498 aa29.73■■■□□ 2.35
E4F1-207ENST00000565413 SLC4A1APQ9BWU0 796 aaKnown RBP29.73■■■□□ 2.35
E4F1-207ENST00000565413 METP08581 1390 aa29.73■■■□□ 2.35
E4F1-207ENST00000565413 VGFO15240 615 aaPredicted RBP29.71■■■□□ 2.35
E4F1-207ENST00000565413 BRINP3Q76B58 766 aa29.7■■■□□ 2.35
E4F1-207ENST00000565413 SHPRHQ149N8 1683 aa29.66■■■□□ 2.34
E4F1-207ENST00000565413 RPGRIP1LQ68CZ1 1315 aa29.66■■■□□ 2.34
E4F1-207ENST00000565413 ADGRL3Q9HAR2 1447 aa29.65■■■□□ 2.34
E4F1-207ENST00000565413 ASXL1Q8IXJ9 1541 aa29.64■■■□□ 2.34
E4F1-207ENST00000565413 MST1RQ04912 1400 aa29.63■■■□□ 2.33
E4F1-207ENST00000565413 ZNF772Q68DY9 489 aaPredicted RBP29.62■■■□□ 2.33
E4F1-207ENST00000565413 LRP6O75581 1613 aa29.6■■■□□ 2.33
E4F1-207ENST00000565413 PTCH1Q13635 1447 aa29.58■■■□□ 2.33
E4F1-207ENST00000565413 NALCNQ8IZF0 1738 aa29.58■■■□□ 2.33
E4F1-207ENST00000565413 LRRC59Q96AG4 307 aaKnown RBP29.57■■■□□ 2.32
E4F1-207ENST00000565413 NUTM2BA6NNL0 878 aaPredicted RBP29.56■■■□□ 2.32
E4F1-207ENST00000565413 NUTM2EB1AL46 878 aaPredicted RBP29.56■■■□□ 2.32
E4F1-207ENST00000565413 NUTM2AQ8IVF1 878 aaPredicted RBP29.56■■■□□ 2.32
E4F1-207ENST00000565413 NHSL1Q5SYE7 1610 aa29.56■■■□□ 2.32
E4F1-207ENST00000565413 SETD5Q9C0A6 1442 aa29.54■■■□□ 2.32
E4F1-207ENST00000565413 PPLO60437 1756 aa29.54■■■□□ 2.32
E4F1-207ENST00000565413 CCDC144AA2RUR9 1427 aa29.54■■■□□ 2.32
E4F1-207ENST00000565413 SETD1AO15047 1707 aaKnown RBP29.51■■■□□ 2.32
E4F1-207ENST00000565413 FOXD1Q16676 465 aa29.5■■■□□ 2.31
E4F1-207ENST00000565413 ROBO2Q9HCK4 1378 aa29.5■■■□□ 2.31
E4F1-207ENST00000565413 C1orf167Q5SNV9 1468 aa29.48■■■□□ 2.31
E4F1-207ENST00000565413 ACIN1Q9UKV3 1341 aaKnown RBP29.46■■■□□ 2.31
E4F1-207ENST00000565413 PRAG1Q86YV5 1406 aa29.46■■■□□ 2.31
E4F1-207ENST00000565413 MPHOSPH9Q99550 1183 aa29.45■■■□□ 2.31
E4F1-207ENST00000565413 RGL3Q3MIN7 710 aa29.44■■■□□ 2.3
E4F1-207ENST00000565413 DDX17Q92841 729 aaKnown RBP29.44■■■□□ 2.3
E4F1-207ENST00000565413 RXRBP28702 533 aa29.43■■■□□ 2.3
E4F1-207ENST00000565413 ANKRD30BQ9BXX2 1392 aa29.42■■■□□ 2.3
E4F1-207ENST00000565413 AFF2P51816 1311 aa29.42■■■□□ 2.3
E4F1-207ENST00000565413 PNPLA6Q8IY17 1366 aa29.41■■■□□ 2.3
E4F1-207ENST00000565413 C8orf37Q96NL8 207 aa29.39■■■□□ 2.3
E4F1-207ENST00000565413 ORAI2Q96SN7 254 aa29.38■■■□□ 2.29
E4F1-207ENST00000565413 ADGRF5Q8IZF2 1346 aa29.38■■■□□ 2.29
E4F1-207ENST00000565413 LAMC1P11047 1609 aa29.36■■■□□ 2.29
E4F1-207ENST00000565413 SPATA31E1Q6ZUB1 1445 aa29.36■■■□□ 2.29
E4F1-207ENST00000565413 STK26Q9P289 416 aa29.35■■■□□ 2.29
E4F1-207ENST00000565413 CDC42BPGQ6DT37 1551 aa29.34■■■□□ 2.29
E4F1-207ENST00000565413 SOS2Q07890 1332 aaPredicted RBP29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms