RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PPP1R15AO75807 674 aaPredicted RBP18.51■□□□□ 0.55
GTF3C1-204ENST00000564664 PROSER2Q86WR7 435 aaPredicted RBP18.51■□□□□ 0.55
GTF3C1-204ENST00000564664 TBX22Q9Y458 520 aa18.51■□□□□ 0.55
GTF3C1-204ENST00000564664 IQGAP3Q86VI3 1631 aa18.51■□□□□ 0.55
GTF3C1-204ENST00000564664 ALKQ9UM73 1620 aa18.51■□□□□ 0.55
GTF3C1-204ENST00000564664 SOCS7O14512 581 aa18.5■□□□□ 0.55
GTF3C1-204ENST00000564664 RIMS2Q9UQ26 1411 aa18.49■□□□□ 0.55
GTF3C1-204ENST00000564664 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
GTF3C1-204ENST00000564664 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
GTF3C1-204ENST00000564664 RRBP1Q9P2E9 1410 aaKnown RBP18.49■□□□□ 0.55
GTF3C1-204ENST00000564664 TMEM94Q12767 1356 aa18.48■□□□□ 0.55
GTF3C1-204ENST00000564664 E9PCH4 1651 aa18.47■□□□□ 0.55
GTF3C1-204ENST00000564664 FAM135BQ49AJ0 1406 aa18.46■□□□□ 0.55
GTF3C1-204ENST00000564664 NKTRP30414 1462 aaKnown RBP18.46■□□□□ 0.54
GTF3C1-204ENST00000564664 PIK3R4Q99570 1358 aa18.43■□□□□ 0.54
GTF3C1-204ENST00000564664 NCOA3Q9Y6Q9 1424 aa18.43■□□□□ 0.54
GTF3C1-204ENST00000564664 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
GTF3C1-204ENST00000564664 NWD1Q149M9 1564 aa18.42■□□□□ 0.54
GTF3C1-204ENST00000564664 MYO5BQ9ULV0 1848 aa18.41■□□□□ 0.54
GTF3C1-204ENST00000564664 MSH6P52701 1360 aa18.41■□□□□ 0.54
GTF3C1-204ENST00000564664 CHD2O14647 1828 aaKnown RBP18.39■□□□□ 0.53
GTF3C1-204ENST00000564664 NAIPQ13075 1403 aa18.39■□□□□ 0.53
GTF3C1-204ENST00000564664 SLAIN2Q9P270 581 aa18.38■□□□□ 0.53
GTF3C1-204ENST00000564664 MED1Q15648 1581 aaPredicted RBP18.38■□□□□ 0.53
GTF3C1-204ENST00000564664 NUTM2DQ5VT03 806 aaPredicted RBP18.37■□□□□ 0.53
GTF3C1-204ENST00000564664 ADAMTS13Q76LX8 1427 aa18.37■□□□□ 0.53
GTF3C1-204ENST00000564664 DIP2AQ14689 1571 aa18.37■□□□□ 0.53
GTF3C1-204ENST00000564664 RBM33Q96EV2 1170 aaKnown RBP18.36■□□□□ 0.53
GTF3C1-204ENST00000564664 PHF23Q9BUL5 403 aaPredicted RBP18.36■□□□□ 0.53
GTF3C1-204ENST00000564664 ZNF326Q5BKZ1 582 aaKnown RBP18.35■□□□□ 0.53
GTF3C1-204ENST00000564664 SENP3Q9H4L4 574 aaPredicted RBP18.35■□□□□ 0.53
GTF3C1-204ENST00000564664 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
GTF3C1-204ENST00000564664 C19orf44Q9H6X5 657 aa18.34■□□□□ 0.53
GTF3C1-204ENST00000564664 TRIM52Q96A61 297 aa18.33■□□□□ 0.52
GTF3C1-204ENST00000564664 AMOTL2Q9Y2J4 779 aa18.33■□□□□ 0.52
GTF3C1-204ENST00000564664 SPHKAPQ2M3C7 1700 aa18.32■□□□□ 0.52
GTF3C1-204ENST00000564664 CADPS2Q86UW7 1296 aa18.32■□□□□ 0.52
GTF3C1-204ENST00000564664 C14orf37Q86TY3 774 aa18.31■□□□□ 0.52
GTF3C1-204ENST00000564664 TRPM2O94759 1503 aa18.31■□□□□ 0.52
GTF3C1-204ENST00000564664 ACIN1Q9UKV3 1341 aaKnown RBP18.3■□□□□ 0.52
GTF3C1-204ENST00000564664 ATF3P18847 181 aa18.3■□□□□ 0.52
GTF3C1-204ENST00000564664 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
GTF3C1-204ENST00000564664 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
GTF3C1-204ENST00000564664 VGFO15240 615 aaPredicted RBP18.28■□□□□ 0.52
GTF3C1-204ENST00000564664 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
GTF3C1-204ENST00000564664 SETBP1Q9Y6X0 1596 aa18.27■□□□□ 0.52
GTF3C1-204ENST00000564664 PTPRUQ92729 1446 aa18.25■□□□□ 0.51
GTF3C1-204ENST00000564664 KIF1BO60333 1816 aa18.23■□□□□ 0.51
GTF3C1-204ENST00000564664 CLTCL1P53675 1640 aa18.23■□□□□ 0.51
GTF3C1-204ENST00000564664 JCADQ9P266 1359 aa18.22■□□□□ 0.51
GTF3C1-204ENST00000564664 DCCP43146 1447 aa18.22■□□□□ 0.51
GTF3C1-204ENST00000564664 METP08581 1390 aa18.21■□□□□ 0.51
GTF3C1-204ENST00000564664 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
GTF3C1-204ENST00000564664 NRXN3Q9Y4C0 1643 aa18.2■□□□□ 0.5
GTF3C1-204ENST00000564664 RGS17Q9UGC6 210 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-204ENST00000564664 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-204ENST00000564664 PHLPP1O60346 1717 aa18.18■□□□□ 0.5
GTF3C1-204ENST00000564664 MPHOSPH9Q99550 1183 aa18.17■□□□□ 0.5
GTF3C1-204ENST00000564664 XRN1Q8IZH2 1706 aaKnown RBP18.17■□□□□ 0.5
GTF3C1-204ENST00000564664 SPATA31A6Q5VVP1 1343 aa18.17■□□□□ 0.5
GTF3C1-204ENST00000564664 BRINP3Q76B58 766 aa18.16■□□□□ 0.5
GTF3C1-204ENST00000564664 AHDC1Q5TGY3 1603 aaPredicted RBP18.13■□□□□ 0.49
GTF3C1-204ENST00000564664 CCDC144AA2RUR9 1427 aa18.13■□□□□ 0.49
GTF3C1-204ENST00000564664 ADGRL3Q9HAR2 1447 aa18.12■□□□□ 0.49
GTF3C1-204ENST00000564664 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
GTF3C1-204ENST00000564664 FOXD1Q16676 465 aa18.11■□□□□ 0.49
GTF3C1-204ENST00000564664 PTCH1Q13635 1447 aa18.11■□□□□ 0.49
GTF3C1-204ENST00000564664 PRAG1Q86YV5 1406 aa18.11■□□□□ 0.49
GTF3C1-204ENST00000564664 MST1RQ04912 1400 aa18.1■□□□□ 0.49
GTF3C1-204ENST00000564664 ANKRD30BQ9BXX2 1392 aa18.1■□□□□ 0.49
GTF3C1-204ENST00000564664 LRRC59Q96AG4 307 aaKnown RBP18.1■□□□□ 0.49
GTF3C1-204ENST00000564664 POTEAQ6S8J7 498 aa18.09■□□□□ 0.49
GTF3C1-204ENST00000564664 SETD5Q9C0A6 1442 aa18.08■□□□□ 0.49
GTF3C1-204ENST00000564664 RGL3Q3MIN7 710 aa18.07■□□□□ 0.48
GTF3C1-204ENST00000564664 PPLO60437 1756 aa18.07■□□□□ 0.48
GTF3C1-204ENST00000564664 SPATA31E1Q6ZUB1 1445 aa18.06■□□□□ 0.48
GTF3C1-204ENST00000564664 ROBO2Q9HCK4 1378 aa18.06■□□□□ 0.48
GTF3C1-204ENST00000564664 MEX3CQ5U5Q3 659 aaKnown RBP18.06■□□□□ 0.48
GTF3C1-204ENST00000564664 ZNF772Q68DY9 489 aaPredicted RBP18.06■□□□□ 0.48
GTF3C1-204ENST00000564664 ASXL1Q8IXJ9 1541 aa18.06■□□□□ 0.48
GTF3C1-204ENST00000564664 ADGRF5Q8IZF2 1346 aa18.04■□□□□ 0.48
GTF3C1-204ENST00000564664 SHPRHQ149N8 1683 aa18.04■□□□□ 0.48
GTF3C1-204ENST00000564664 SETD1AO15047 1707 aaKnown RBP18.03■□□□□ 0.48
GTF3C1-204ENST00000564664 C1orf167Q5SNV9 1468 aa18.03■□□□□ 0.48
GTF3C1-204ENST00000564664 HRCP23327 699 aa18.02■□□□□ 0.48
GTF3C1-204ENST00000564664 SIRT1Q96EB6 747 aa18.02■□□□□ 0.48
GTF3C1-204ENST00000564664 ABCC11Q96J66 1382 aa18.01■□□□□ 0.47
GTF3C1-204ENST00000564664 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
GTF3C1-204ENST00000564664 NALCNQ8IZF0 1738 aa18■□□□□ 0.47
GTF3C1-204ENST00000564664 LRP6O75581 1613 aa17.99■□□□□ 0.47
GTF3C1-204ENST00000564664 NHSL1Q5SYE7 1610 aa17.99■□□□□ 0.47
GTF3C1-204ENST00000564664 TECPR2O15040 1411 aa17.98■□□□□ 0.47
GTF3C1-204ENST00000564664 NUTM2BA6NNL0 878 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-204ENST00000564664 NUTM2EB1AL46 878 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-204ENST00000564664 NUTM2AQ8IVF1 878 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-204ENST00000564664 C14orf93Q9H972 538 aaKnown RBP17.98■□□□□ 0.47
GTF3C1-204ENST00000564664 SOS2Q07890 1332 aaPredicted RBP17.98■□□□□ 0.47
GTF3C1-204ENST00000564664 RAB3GAP2Q9H2M9 1393 aa17.97■□□□□ 0.47
GTF3C1-204ENST00000564664 ORAI2Q96SN7 254 aa17.97■□□□□ 0.47
GTF3C1-204ENST00000564664 STK26Q9P289 416 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms