RNA–Protein interactions for RNA: ENST00000564647.5

RPL4-207, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 1,110 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-207ENST00000564647 ONECUT3O60422 494 aaPredicted RBP12.38□□□□□ -0.43
RPL4-207ENST00000564647 DDRGK1Q96HY6 314 aa12.38□□□□□ -0.43
RPL4-207ENST00000564647 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
RPL4-207ENST00000564647 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
RPL4-207ENST00000564647 ANKK1Q8NFD2 765 aa12.36□□□□□ -0.43
RPL4-207ENST00000564647 RBM46Q8TBY0 533 aaKnown RBP12.36□□□□□ -0.43
RPL4-207ENST00000564647 KIAA1468Q9P260 1216 aa12.36□□□□□ -0.43
RPL4-207ENST00000564647 THSD4Q6ZMP0 1018 aa12.35□□□□□ -0.43
RPL4-207ENST00000564647 PTPN5P54829 565 aa12.34□□□□□ -0.43
RPL4-207ENST00000564647 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
RPL4-207ENST00000564647 SSTR3P32745 418 aaPredicted RBP12.33□□□□□ -0.44
RPL4-207ENST00000564647 NUDT18Q6ZVK8 323 aa12.33□□□□□ -0.44
RPL4-207ENST00000564647 EYA1Q99502 592 aa12.33□□□□□ -0.44
RPL4-207ENST00000564647 PACS2Q86VP3 889 aa12.32□□□□□ -0.44
RPL4-207ENST00000564647 SEPT9Q9UHD8 586 aaPredicted RBP12.32□□□□□ -0.44
RPL4-207ENST00000564647 TATDN2Q93075 761 aa12.31□□□□□ -0.44
RPL4-207ENST00000564647 FAM217BQ9NTX9 383 aaPredicted RBP12.31□□□□□ -0.44
RPL4-207ENST00000564647 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
RPL4-207ENST00000564647 RCCD1A6NED2 376 aa12.3□□□□□ -0.44
RPL4-207ENST00000564647 NBPF26B4DH59 902 aa12.29□□□□□ -0.44
RPL4-207ENST00000564647 SMAPO00193 183 aa12.29□□□□□ -0.44
RPL4-207ENST00000564647 FAM98CQ17RN3 349 aaKnown RBP12.29□□□□□ -0.44
RPL4-207ENST00000564647 PLA2G2EQ9NZK7 142 aa12.29□□□□□ -0.44
RPL4-207ENST00000564647 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.28□□□□□ -0.44
RPL4-207ENST00000564647 ZFRQ96KR1 1074 aaKnown RBP12.27□□□□□ -0.45
RPL4-207ENST00000564647 BEGAINQ9BUH8 593 aa12.27□□□□□ -0.45
RPL4-207ENST00000564647 DNAJB2P25686 324 aa12.24□□□□□ -0.45
RPL4-207ENST00000564647 BCAMP50895 628 aa12.24□□□□□ -0.45
RPL4-207ENST00000564647 SOWAHBA6NEL2 793 aa12.23□□□□□ -0.45
RPL4-207ENST00000564647 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
RPL4-207ENST00000564647 TMEM134Q9H6X4 195 aa12.21□□□□□ -0.45
RPL4-207ENST00000564647 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.21□□□□□ -0.45
RPL4-207ENST00000564647 C14orf37Q86TY3 774 aa12.2□□□□□ -0.46
RPL4-207ENST00000564647 GOPCQ9HD26 462 aa12.2□□□□□ -0.46
RPL4-207ENST00000564647 NYAP1Q6ZVC0 841 aa12.19□□□□□ -0.46
RPL4-207ENST00000564647 DDX11L8A8MPP1 907 aa12.18□□□□□ -0.46
RPL4-207ENST00000564647 SH3D19Q5HYK7 790 aa12.18□□□□□ -0.46
RPL4-207ENST00000564647 CD46P15529 392 aa12.16□□□□□ -0.46
RPL4-207ENST00000564647 PCMTD1Q96MG8 357 aaPredicted RBP12.16□□□□□ -0.46
RPL4-207ENST00000564647 RSPH6AQ9H0K4 717 aa12.16□□□□□ -0.46
RPL4-207ENST00000564647 ERICH6Q7L0X2 663 aa12.15□□□□□ -0.46
RPL4-207ENST00000564647 SULF1Q8IWU6 871 aa12.15□□□□□ -0.46
RPL4-207ENST00000564647 HPS5Q9UPZ3 1129 aa12.15□□□□□ -0.46
RPL4-207ENST00000564647 TBC1D2Q9BYX2 928 aa12.14□□□□□ -0.47
RPL4-207ENST00000564647 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
RPL4-207ENST00000564647 TSR3Q9UJK0 312 aaKnown RBP12.14□□□□□ -0.47
RPL4-207ENST00000564647 HDGFP51858 240 aaKnown RBP12.13□□□□□ -0.47
RPL4-207ENST00000564647 SKIV2LQ15477 1246 aaKnown RBP12.13□□□□□ -0.47
RPL4-207ENST00000564647 MYSM1Q5VVJ2 828 aa12.13□□□□□ -0.47
RPL4-207ENST00000564647 SWT1Q5T5J6 900 aaKnown RBP12.12□□□□□ -0.47
RPL4-207ENST00000564647 SAMD7Q7Z3H4 446 aa12.12□□□□□ -0.47
RPL4-207ENST00000564647 PROCA1Q8NCQ7 364 aaPredicted RBP12.12□□□□□ -0.47
RPL4-207ENST00000564647 WBP1LQ9NX94 342 aa12.12□□□□□ -0.47
RPL4-207ENST00000564647 RNF40O75150 1001 aa12.11□□□□□ -0.47
RPL4-207ENST00000564647 RDH13Q8NBN7 331 aa12.11□□□□□ -0.47
RPL4-207ENST00000564647 SPIRE2Q8WWL2 714 aa12.11□□□□□ -0.47
RPL4-207ENST00000564647 ATP1B4Q9UN42 357 aaPredicted RBP12.1□□□□□ -0.47
RPL4-207ENST00000564647 SLC4A3P48751 1232 aa12.08□□□□□ -0.48
RPL4-207ENST00000564647 PPP4CP60510 307 aa12.08□□□□□ -0.48
RPL4-207ENST00000564647 NECTIN2Q92692 538 aa12.08□□□□□ -0.48
RPL4-207ENST00000564647 SLC10A3P09131 477 aa12.07□□□□□ -0.48
RPL4-207ENST00000564647 CLK2P49760 499 aaKnown RBP12.07□□□□□ -0.48
RPL4-207ENST00000564647 DIXDC1Q155Q3 683 aa12.07□□□□□ -0.48
RPL4-207ENST00000564647 IFFO2Q5TF58 517 aa12.07□□□□□ -0.48
RPL4-207ENST00000564647 NUTM1Q86Y26 1132 aa12.07□□□□□ -0.48
RPL4-207ENST00000564647 LIMD1Q9UGP4 676 aa12.05□□□□□ -0.48
RPL4-207ENST00000564647 ITGBL1O95965 494 aaPredicted RBP12.04□□□□□ -0.48
RPL4-207ENST00000564647 RIC3Q7Z5B4 369 aa12.04□□□□□ -0.48
RPL4-207ENST00000564647 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.04□□□□□ -0.48
RPL4-207ENST00000564647 MOXD2PA6NHM9 499 aa12.03□□□□□ -0.48
RPL4-207ENST00000564647 GCGRP47871 477 aa12.03□□□□□ -0.48
RPL4-207ENST00000564647 RSPH4AQ5TD94 716 aa12.03□□□□□ -0.48
RPL4-207ENST00000564647 SLF2Q8IX21 1173 aa12.03□□□□□ -0.48
RPL4-207ENST00000564647 NDUFV2P19404 249 aa12.02□□□□□ -0.49
RPL4-207ENST00000564647 KDM4AO75164 1064 aa12.01□□□□□ -0.49
RPL4-207ENST00000564647 FBXO31Q5XUX0 539 aaPredicted RBP12.01□□□□□ -0.49
RPL4-207ENST00000564647 A0A0G2JS52 829 aa12□□□□□ -0.49
RPL4-207ENST00000564647 RSBN1LQ6PCB5 846 aaPredicted RBP12□□□□□ -0.49
RPL4-207ENST00000564647 SPTLC1O15269 473 aa11.99□□□□□ -0.49
RPL4-207ENST00000564647 KCNC4Q03721 635 aa11.99□□□□□ -0.49
RPL4-207ENST00000564647 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
RPL4-207ENST00000564647 PCDHB15Q9Y5E8 787 aa11.97□□□□□ -0.49
RPL4-207ENST00000564647 HOXA2O43364 376 aa11.96□□□□□ -0.49
RPL4-207ENST00000564647 CFHP08603 1231 aa11.95□□□□□ -0.5
RPL4-207ENST00000564647 USP46P62068 366 aa11.95□□□□□ -0.5
RPL4-207ENST00000564647 FLIIQ13045 1269 aa11.95□□□□□ -0.5
RPL4-207ENST00000564647 HLA-CQ95604 372 aa11.95□□□□□ -0.5
RPL4-207ENST00000564647 RFC5P40937 340 aa11.94□□□□□ -0.5
RPL4-207ENST00000564647 GUCA2AQ02747 115 aa11.94□□□□□ -0.5
RPL4-207ENST00000564647 QPCTQ16769 361 aa11.94□□□□□ -0.5
RPL4-207ENST00000564647 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
RPL4-207ENST00000564647 PRR14Q9BWN1 585 aa11.94□□□□□ -0.5
RPL4-207ENST00000564647 GJA5P36382 358 aa11.92□□□□□ -0.5
RPL4-207ENST00000564647 PPP2R2DQ66LE6 453 aa11.92□□□□□ -0.5
RPL4-207ENST00000564647 ZMYND15Q9H091 742 aa11.92□□□□□ -0.5
RPL4-207ENST00000564647 RGS20O76081 388 aa11.91□□□□□ -0.5
RPL4-207ENST00000564647 FDX1P10109 184 aa11.91□□□□□ -0.5
RPL4-207ENST00000564647 FUT2Q10981 343 aa11.91□□□□□ -0.5
RPL4-207ENST00000564647 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
RPL4-207ENST00000564647 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms