RNA–Protein interactions for RNA: ENST00000564354.1

AP000842.3-201, humanhuman

TSL 3 BASIC

Gene AP000842.3, Length 808 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000842.3-201ENST00000564354 RNF223E7ERA6 249 aa13.63□□□□□ -0.23
AP000842.3-201ENST00000564354 TRIM67Q6ZTA4 783 aa13.63□□□□□ -0.23
AP000842.3-201ENST00000564354 EMID1Q96A84 441 aaPredicted RBP13.63□□□□□ -0.23
AP000842.3-201ENST00000564354 DNAJB2P25686 324 aa13.62□□□□□ -0.23
AP000842.3-201ENST00000564354 SLC19A1P41440 591 aa13.61□□□□□ -0.23
AP000842.3-201ENST00000564354 MLLT3P42568 568 aaPredicted RBP13.6□□□□□ -0.23
AP000842.3-201ENST00000564354 PTGDRQ13258 359 aa13.6□□□□□ -0.23
AP000842.3-201ENST00000564354 ARHGEF1Q92888 912 aaKnown RBP13.59□□□□□ -0.23
AP000842.3-201ENST00000564354 TMEM134Q9H6X4 195 aa13.59□□□□□ -0.23
AP000842.3-201ENST00000564354 TLL1O43897 1013 aa13.57□□□□□ -0.24
AP000842.3-201ENST00000564354 RBM46Q8TBY0 533 aaKnown RBP13.57□□□□□ -0.24
AP000842.3-201ENST00000564354 ADGRG1Q9Y653 693 aa13.57□□□□□ -0.24
AP000842.3-201ENST00000564354 ACTN4O43707 911 aaKnown RBP13.56□□□□□ -0.24
AP000842.3-201ENST00000564354 SPRYD7Q5W111 196 aa13.56□□□□□ -0.24
AP000842.3-201ENST00000564354 ANKLE1Q8NAG6 615 aa13.56□□□□□ -0.24
AP000842.3-201ENST00000564354 PRR20EP86478 221 aa13.55□□□□□ -0.24
AP000842.3-201ENST00000564354 PRR20CP86479 221 aa13.55□□□□□ -0.24
AP000842.3-201ENST00000564354 PRR20DP86480 221 aa13.55□□□□□ -0.24
AP000842.3-201ENST00000564354 PRR20BP86481 221 aa13.55□□□□□ -0.24
AP000842.3-201ENST00000564354 PRR20AP86496 221 aa13.55□□□□□ -0.24
AP000842.3-201ENST00000564354 KMT5BQ4FZB7 885 aa13.54□□□□□ -0.24
AP000842.3-201ENST00000564354 ZNF598Q86UK7 904 aaKnown RBP13.54□□□□□ -0.24
AP000842.3-201ENST00000564354 ZNF775Q96BV0 537 aaPredicted RBP13.54□□□□□ -0.24
AP000842.3-201ENST00000564354 RCCD1A6NED2 376 aa13.51□□□□□ -0.25
AP000842.3-201ENST00000564354 DGAT1O75907 488 aa13.51□□□□□ -0.25
AP000842.3-201ENST00000564354 S1PR4O95977 384 aa13.51□□□□□ -0.25
AP000842.3-201ENST00000564354 CFHP08603 1231 aa13.5□□□□□ -0.25
AP000842.3-201ENST00000564354 MYT1Q01538 1121 aa13.5□□□□□ -0.25
AP000842.3-201ENST00000564354 PKDCCQ504Y2 493 aa13.5□□□□□ -0.25
AP000842.3-201ENST00000564354 PPEF1O14829 653 aaPredicted RBP13.49□□□□□ -0.25
AP000842.3-201ENST00000564354 LIAT1Q6ZQX7 453 aa13.49□□□□□ -0.25
AP000842.3-201ENST00000564354 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
AP000842.3-201ENST00000564354 ADH1BP00325 375 aa13.47□□□□□ -0.25
AP000842.3-201ENST00000564354 SLC10A3P09131 477 aa13.46□□□□□ -0.25
AP000842.3-201ENST00000564354 ZNF697Q5TEC3 545 aa13.46□□□□□ -0.25
AP000842.3-201ENST00000564354 GDF9O60383 454 aa13.45□□□□□ -0.26
AP000842.3-201ENST00000564354 FAM161AQ3B820 660 aa13.45□□□□□ -0.26
AP000842.3-201ENST00000564354 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
AP000842.3-201ENST00000564354 NR1I2O75469 434 aa13.44□□□□□ -0.26
AP000842.3-201ENST00000564354 PLCB2Q00722 1185 aa13.43□□□□□ -0.26
AP000842.3-201ENST00000564354 NUTM2FA1L443 756 aa13.42□□□□□ -0.26
AP000842.3-201ENST00000564354 SLC6A16Q9GZN6 736 aa13.41□□□□□ -0.26
AP000842.3-201ENST00000564354 PLA2G2CQ5R387 149 aa13.4□□□□□ -0.26
AP000842.3-201ENST00000564354 FAM187AA6NFU0 413 aa13.39□□□□□ -0.27
AP000842.3-201ENST00000564354 FCHSD2O94868 740 aa13.39□□□□□ -0.27
AP000842.3-201ENST00000564354 CCDC180Q9P1Z9 1646 aa13.39□□□□□ -0.27
AP000842.3-201ENST00000564354 POTECB2RU33 542 aa13.38□□□□□ -0.27
AP000842.3-201ENST00000564354 TNFRSF10AO00220 468 aa13.38□□□□□ -0.27
AP000842.3-201ENST00000564354 PXYLP1Q8TE99 480 aa13.38□□□□□ -0.27
AP000842.3-201ENST00000564354 SCUBE3Q8IX30 993 aa13.37□□□□□ -0.27
AP000842.3-201ENST00000564354 OATP04181 439 aa13.35□□□□□ -0.27
AP000842.3-201ENST00000564354 HAP1P54257 671 aaPredicted RBP13.32□□□□□ -0.28
AP000842.3-201ENST00000564354 LMOD2Q6P5Q4 547 aa13.32□□□□□ -0.28
AP000842.3-201ENST00000564354 PUS10Q3MIT2 529 aaKnown RBP13.31□□□□□ -0.28
AP000842.3-201ENST00000564354 P3H3Q8IVL6 736 aa13.31□□□□□ -0.28
AP000842.3-201ENST00000564354 SPSB2Q99619 263 aa13.31□□□□□ -0.28
AP000842.3-201ENST00000564354 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
AP000842.3-201ENST00000564354 PKD2L1Q9P0L9 805 aa13.31□□□□□ -0.28
AP000842.3-201ENST00000564354 RSPH4AQ5TD94 716 aa13.3□□□□□ -0.28
AP000842.3-201ENST00000564354 METTL3Q86U44 580 aaKnown RBP13.3□□□□□ -0.28
AP000842.3-201ENST00000564354 SEMA3EO15041 775 aa13.28□□□□□ -0.28
AP000842.3-201ENST00000564354 ST8SIA5O15466 376 aa13.28□□□□□ -0.28
AP000842.3-201ENST00000564354 HIC1Q14526 733 aa13.28□□□□□ -0.28
AP000842.3-201ENST00000564354 RPIAP49247 311 aa13.26□□□□□ -0.29
AP000842.3-201ENST00000564354 CRIPAKQ8N1N5 446 aa13.25□□□□□ -0.29
AP000842.3-201ENST00000564354 FOXC1Q12948 553 aa13.24□□□□□ -0.29
AP000842.3-201ENST00000564354 MORN1Q5T089 497 aa13.24□□□□□ -0.29
AP000842.3-201ENST00000564354 LCE2AQ5TA79 106 aaPredicted RBP13.24□□□□□ -0.29
AP000842.3-201ENST00000564354 THAP11Q96EK4 314 aa13.23□□□□□ -0.29
AP000842.3-201ENST00000564354 TREML4Q6UXN2 200 aa13.22□□□□□ -0.29
AP000842.3-201ENST00000564354 TOR4AQ9NXH8 423 aa13.22□□□□□ -0.29
AP000842.3-201ENST00000564354 AVPP01185 164 aa13.21□□□□□ -0.29
AP000842.3-201ENST00000564354 DAXXQ9UER7 740 aaPredicted RBP13.21□□□□□ -0.29
AP000842.3-201ENST00000564354 FCF1Q9Y324 198 aaKnown RBP13.2□□□□□ -0.3
AP000842.3-201ENST00000564354 FUT2Q10981 343 aa13.19□□□□□ -0.3
AP000842.3-201ENST00000564354 CD2BP2O95400 341 aaKnown RBP13.18□□□□□ -0.3
AP000842.3-201ENST00000564354 FAM160A2Q8N612 972 aaPredicted RBP13.18□□□□□ -0.3
AP000842.3-201ENST00000564354 RDH13Q8NBN7 331 aa13.18□□□□□ -0.3
AP000842.3-201ENST00000564354 ATP6V1AP38606 617 aa13.17□□□□□ -0.3
AP000842.3-201ENST00000564354 GNPATO15228 680 aa13.16□□□□□ -0.3
AP000842.3-201ENST00000564354 FECHP22830 423 aa13.16□□□□□ -0.3
AP000842.3-201ENST00000564354 DACH1Q9UI36 760 aa13.16□□□□□ -0.3
AP000842.3-201ENST00000564354 SALL2Q9Y467 1007 aaPredicted RBP13.16□□□□□ -0.3
AP000842.3-201ENST00000564354 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
AP000842.3-201ENST00000564354 GPR37O15354 613 aa13.15□□□□□ -0.3
AP000842.3-201ENST00000564354 FMNL1O95466 1100 aaPredicted RBP13.15□□□□□ -0.3
AP000842.3-201ENST00000564354 RBM26Q5T8P6 1007 aaKnown RBP13.15□□□□□ -0.3
AP000842.3-201ENST00000564354 SLC27A5Q9Y2P5 690 aa13.15□□□□□ -0.3
AP000842.3-201ENST00000564354 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
AP000842.3-201ENST00000564354 CYP4X1Q8N118 509 aa13.14□□□□□ -0.31
AP000842.3-201ENST00000564354 DDX11L8A8MPP1 907 aa13.13□□□□□ -0.31
AP000842.3-201ENST00000564354 GCGRP47871 477 aa13.13□□□□□ -0.31
AP000842.3-201ENST00000564354 AXIN1O15169 862 aa13.12□□□□□ -0.31
AP000842.3-201ENST00000564354 SMCPP49901 116 aaPredicted RBP13.12□□□□□ -0.31
AP000842.3-201ENST00000564354 BRICD5Q6PL45 260 aa13.11□□□□□ -0.31
AP000842.3-201ENST00000564354 PRDM9Q9NQV7 894 aa13.11□□□□□ -0.31
AP000842.3-201ENST00000564354 MSS51Q4VC12 460 aa13.1□□□□□ -0.31
AP000842.3-201ENST00000564354 SULF1Q8IWU6 871 aa13.1□□□□□ -0.31
AP000842.3-201ENST00000564354 GMPR2Q9P2T1 348 aaKnown RBP13.1□□□□□ -0.31
AP000842.3-201ENST00000564354 SMYD5Q6GMV2 418 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms