RNA–Protein interactions for RNA: ENST00000564240.1

AC004449.1-201, humanhuman

BASIC

Gene AC004449.1, Length 433 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004449.1-201ENST00000564240 TMEM94Q12767 1356 aa25.04■■□□□ 1.6
AC004449.1-201ENST00000564240 NUP155O75694 1391 aa25.02■■□□□ 1.6
AC004449.1-201ENST00000564240 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
AC004449.1-201ENST00000564240 MED1Q15648 1581 aaPredicted RBP25.01■■□□□ 1.59
AC004449.1-201ENST00000564240 NUTM2DQ5VT03 806 aaPredicted RBP25.01■■□□□ 1.59
AC004449.1-201ENST00000564240 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.01■■□□□ 1.59
AC004449.1-201ENST00000564240 TET3O43151 1660 aa25.01■■□□□ 1.59
AC004449.1-201ENST00000564240 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
AC004449.1-201ENST00000564240 GCC2Q8IWJ2 1684 aa24.95■■□□□ 1.58
AC004449.1-201ENST00000564240 C14orf37Q86TY3 774 aa24.95■■□□□ 1.58
AC004449.1-201ENST00000564240 PLEKHG1Q9ULL1 1385 aa24.94■■□□□ 1.58
AC004449.1-201ENST00000564240 XIRP1Q702N8 1843 aaKnown RBP24.94■■□□□ 1.58
AC004449.1-201ENST00000564240 MYO5BQ9ULV0 1848 aa24.93■■□□□ 1.58
AC004449.1-201ENST00000564240 UNC13BO14795 1591 aa24.93■■□□□ 1.58
AC004449.1-201ENST00000564240 TBX22Q9Y458 520 aa24.93■■□□□ 1.58
AC004449.1-201ENST00000564240 MSH6P52701 1360 aa24.93■■□□□ 1.58
AC004449.1-201ENST00000564240 ZFYVE9O95405 1425 aa24.91■■□□□ 1.58
AC004449.1-201ENST00000564240 FAM135BQ49AJ0 1406 aa24.91■■□□□ 1.58
AC004449.1-201ENST00000564240 E9PCH4 1651 aa24.89■■□□□ 1.58
AC004449.1-201ENST00000564240 ZNF326Q5BKZ1 582 aaKnown RBP24.89■■□□□ 1.58
AC004449.1-201ENST00000564240 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
AC004449.1-201ENST00000564240 SLAIN2Q9P270 581 aa24.88■■□□□ 1.57
AC004449.1-201ENST00000564240 NKTRP30414 1462 aaKnown RBP24.87■■□□□ 1.57
AC004449.1-201ENST00000564240 IQGAP3Q86VI3 1631 aa24.86■■□□□ 1.57
AC004449.1-201ENST00000564240 NWD1Q149M9 1564 aa24.81■■□□□ 1.56
AC004449.1-201ENST00000564240 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
AC004449.1-201ENST00000564240 CHD2O14647 1828 aaKnown RBP24.81■■□□□ 1.56
AC004449.1-201ENST00000564240 ATF3P18847 181 aa24.8■■□□□ 1.56
AC004449.1-201ENST00000564240 AMOTL2Q9Y2J4 779 aa24.8■■□□□ 1.56
AC004449.1-201ENST00000564240 ROBO1Q9Y6N7 1651 aa24.78■■□□□ 1.56
AC004449.1-201ENST00000564240 C19orf44Q9H6X5 657 aa24.77■■□□□ 1.56
AC004449.1-201ENST00000564240 ADAMTS13Q76LX8 1427 aa24.77■■□□□ 1.56
AC004449.1-201ENST00000564240 CADPS2Q86UW7 1296 aa24.76■■□□□ 1.55
AC004449.1-201ENST00000564240 PIK3R4Q99570 1358 aa24.75■■□□□ 1.55
AC004449.1-201ENST00000564240 NCOA3Q9Y6Q9 1424 aa24.74■■□□□ 1.55
AC004449.1-201ENST00000564240 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
AC004449.1-201ENST00000564240 RRBP1Q9P2E9 1410 aaKnown RBP24.71■■□□□ 1.55
AC004449.1-201ENST00000564240 DIP2AQ14689 1571 aa24.71■■□□□ 1.55
AC004449.1-201ENST00000564240 TRPM2O94759 1503 aa24.7■■□□□ 1.54
AC004449.1-201ENST00000564240 SPHKAPQ2M3C7 1700 aa24.69■■□□□ 1.54
AC004449.1-201ENST00000564240 PHLPP1O60346 1717 aa24.68■■□□□ 1.54
AC004449.1-201ENST00000564240 JCADQ9P266 1359 aa24.67■■□□□ 1.54
AC004449.1-201ENST00000564240 NAIPQ13075 1403 aa24.67■■□□□ 1.54
AC004449.1-201ENST00000564240 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
AC004449.1-201ENST00000564240 MEX3CQ5U5Q3 659 aaKnown RBP24.65■■□□□ 1.54
AC004449.1-201ENST00000564240 PTPRUQ92729 1446 aa24.65■■□□□ 1.54
AC004449.1-201ENST00000564240 POTEAQ6S8J7 498 aa24.64■■□□□ 1.54
AC004449.1-201ENST00000564240 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.62■■□□□ 1.53
AC004449.1-201ENST00000564240 VGFO15240 615 aaPredicted RBP24.61■■□□□ 1.53
AC004449.1-201ENST00000564240 METP08581 1390 aa24.61■■□□□ 1.53
AC004449.1-201ENST00000564240 BRINP3Q76B58 766 aa24.59■■□□□ 1.53
AC004449.1-201ENST00000564240 CLTCL1P53675 1640 aa24.58■■□□□ 1.53
AC004449.1-201ENST00000564240 KIF1BO60333 1816 aa24.58■■□□□ 1.53
AC004449.1-201ENST00000564240 SETBP1Q9Y6X0 1596 aa24.56■■□□□ 1.52
AC004449.1-201ENST00000564240 HFM1A2PYH4 1435 aa24.56■■□□□ 1.52
AC004449.1-201ENST00000564240 NUTM2BA6NNL0 878 aaPredicted RBP24.56■■□□□ 1.52
AC004449.1-201ENST00000564240 NUTM2EB1AL46 878 aaPredicted RBP24.56■■□□□ 1.52
AC004449.1-201ENST00000564240 NUTM2AQ8IVF1 878 aaPredicted RBP24.56■■□□□ 1.52
AC004449.1-201ENST00000564240 SPATA31A6Q5VVP1 1343 aa24.56■■□□□ 1.52
AC004449.1-201ENST00000564240 FOXD1Q16676 465 aa24.54■■□□□ 1.52
AC004449.1-201ENST00000564240 RPGRIP1LQ68CZ1 1315 aa24.54■■□□□ 1.52
AC004449.1-201ENST00000564240 NRXN3Q9Y4C0 1643 aa24.53■■□□□ 1.52
AC004449.1-201ENST00000564240 NEXMIFQ5QGS0 1516 aa24.52■■□□□ 1.52
AC004449.1-201ENST00000564240 COL16A1Q07092 1604 aaPredicted RBP24.51■■□□□ 1.51
AC004449.1-201ENST00000564240 DCCP43146 1447 aa24.51■■□□□ 1.51
AC004449.1-201ENST00000564240 ZNF772Q68DY9 489 aaPredicted RBP24.49■■□□□ 1.51
AC004449.1-201ENST00000564240 RGL3Q3MIN7 710 aa24.48■■□□□ 1.51
AC004449.1-201ENST00000564240 XRN1Q8IZH2 1706 aaKnown RBP24.48■■□□□ 1.51
AC004449.1-201ENST00000564240 LRRC59Q96AG4 307 aaKnown RBP24.48■■□□□ 1.51
AC004449.1-201ENST00000564240 AHDC1Q5TGY3 1603 aaPredicted RBP24.47■■□□□ 1.51
AC004449.1-201ENST00000564240 MST1RQ04912 1400 aa24.46■■□□□ 1.51
AC004449.1-201ENST00000564240 DDX17Q92841 729 aaKnown RBP24.46■■□□□ 1.51
AC004449.1-201ENST00000564240 ADGRL3Q9HAR2 1447 aa24.45■■□□□ 1.51
AC004449.1-201ENST00000564240 MPHOSPH9Q99550 1183 aa24.44■■□□□ 1.5
AC004449.1-201ENST00000564240 ASXL1Q8IXJ9 1541 aa24.43■■□□□ 1.5
AC004449.1-201ENST00000564240 LRP6O75581 1613 aa24.42■■□□□ 1.5
AC004449.1-201ENST00000564240 STK26Q9P289 416 aa24.4■■□□□ 1.5
AC004449.1-201ENST00000564240 CCDC144AA2RUR9 1427 aa24.4■■□□□ 1.5
AC004449.1-201ENST00000564240 ROBO2Q9HCK4 1378 aa24.39■■□□□ 1.49
AC004449.1-201ENST00000564240 SHPRHQ149N8 1683 aa24.38■■□□□ 1.49
AC004449.1-201ENST00000564240 RXRBP28702 533 aa24.38■■□□□ 1.49
AC004449.1-201ENST00000564240 ORAI2Q96SN7 254 aa24.38■■□□□ 1.49
AC004449.1-201ENST00000564240 SETD5Q9C0A6 1442 aa24.37■■□□□ 1.49
AC004449.1-201ENST00000564240 ADGRF5Q8IZF2 1346 aa24.36■■□□□ 1.49
AC004449.1-201ENST00000564240 C8orf37Q96NL8 207 aa24.36■■□□□ 1.49
AC004449.1-201ENST00000564240 C1orf167Q5SNV9 1468 aa24.36■■□□□ 1.49
AC004449.1-201ENST00000564240 AFF2P51816 1311 aa24.35■■□□□ 1.49
AC004449.1-201ENST00000564240 PTCH1Q13635 1447 aa24.35■■□□□ 1.49
AC004449.1-201ENST00000564240 NALCNQ8IZF0 1738 aa24.34■■□□□ 1.49
AC004449.1-201ENST00000564240 PPLO60437 1756 aa24.33■■□□□ 1.49
AC004449.1-201ENST00000564240 ADAMTS2O95450 1211 aa24.32■■□□□ 1.48
AC004449.1-201ENST00000564240 ESCO1Q5FWF5 840 aa24.32■■□□□ 1.48
AC004449.1-201ENST00000564240 ACIN1Q9UKV3 1341 aaKnown RBP24.32■■□□□ 1.48
AC004449.1-201ENST00000564240 TMEM132EQ6IEE7 984 aa24.31■■□□□ 1.48
AC004449.1-201ENST00000564240 NGLY1Q96IV0 654 aa24.31■■□□□ 1.48
AC004449.1-201ENST00000564240 PNPLA6Q8IY17 1366 aa24.3■■□□□ 1.48
AC004449.1-201ENST00000564240 ANKRD30BQ9BXX2 1392 aa24.3■■□□□ 1.48
AC004449.1-201ENST00000564240 WAPLQ7Z5K2 1190 aa24.3■■□□□ 1.48
AC004449.1-201ENST00000564240 NHSL1Q5SYE7 1610 aa24.3■■□□□ 1.48
AC004449.1-201ENST00000564240 NUTM2FA1L443 756 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms