RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 ANKRD50Q9ULJ7 1429 aa20.72■□□□□ 0.91
SPG7-207ENST00000563218 FAM50AQ14320 339 aaKnown RBP20.72■□□□□ 0.91
SPG7-207ENST00000563218 RPRD2Q5VT52 1461 aaKnown RBP20.71■□□□□ 0.91
SPG7-207ENST00000563218 ZFYVE9O95405 1425 aa20.7■□□□□ 0.9
SPG7-207ENST00000563218 NKTRP30414 1462 aaKnown RBP20.7■□□□□ 0.9
SPG7-207ENST00000563218 PHLPP1O60346 1717 aa20.7■□□□□ 0.9
SPG7-207ENST00000563218 IQGAP3Q86VI3 1631 aa20.69■□□□□ 0.9
SPG7-207ENST00000563218 FAM135BQ49AJ0 1406 aa20.68■□□□□ 0.9
SPG7-207ENST00000563218 KCNA6P17658 529 aa20.67■□□□□ 0.9
SPG7-207ENST00000563218 RGS17Q9UGC6 210 aaPredicted RBP20.67■□□□□ 0.9
SPG7-207ENST00000563218 RIMS2Q9UQ26 1411 aa20.65■□□□□ 0.9
SPG7-207ENST00000563218 PROSER2Q86WR7 435 aaPredicted RBP20.65■□□□□ 0.9
SPG7-207ENST00000563218 SETD1AO15047 1707 aaKnown RBP20.64■□□□□ 0.9
SPG7-207ENST00000563218 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
SPG7-207ENST00000563218 PLEKHG1Q9ULL1 1385 aa20.62■□□□□ 0.89
SPG7-207ENST00000563218 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
SPG7-207ENST00000563218 SPHKAPQ2M3C7 1700 aa20.61■□□□□ 0.89
SPG7-207ENST00000563218 COL16A1Q07092 1604 aaPredicted RBP20.6■□□□□ 0.89
SPG7-207ENST00000563218 BCANQ96GW7 911 aa20.6■□□□□ 0.89
SPG7-207ENST00000563218 MSH6P52701 1360 aa20.58■□□□□ 0.88
SPG7-207ENST00000563218 NRXN3Q9Y4C0 1643 aa20.57■□□□□ 0.88
SPG7-207ENST00000563218 DIP2AQ14689 1571 aa20.57■□□□□ 0.88
SPG7-207ENST00000563218 NUTM2DQ5VT03 806 aaPredicted RBP20.57■□□□□ 0.88
SPG7-207ENST00000563218 ADAMTS13Q76LX8 1427 aa20.57■□□□□ 0.88
SPG7-207ENST00000563218 PPP1R15AO75807 674 aaPredicted RBP20.54■□□□□ 0.88
SPG7-207ENST00000563218 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
SPG7-207ENST00000563218 POTEAQ6S8J7 498 aa20.54■□□□□ 0.88
SPG7-207ENST00000563218 ROCK1Q13464 1354 aa20.54■□□□□ 0.88
SPG7-207ENST00000563218 XRN1Q8IZH2 1706 aaKnown RBP20.52■□□□□ 0.88
SPG7-207ENST00000563218 TRPM2O94759 1503 aa20.51■□□□□ 0.87
SPG7-207ENST00000563218 SHPRHQ149N8 1683 aa20.51■□□□□ 0.87
SPG7-207ENST00000563218 PTPRUQ92729 1446 aa20.5■□□□□ 0.87
SPG7-207ENST00000563218 SLAIN2Q9P270 581 aa20.49■□□□□ 0.87
SPG7-207ENST00000563218 LRP6O75581 1613 aa20.49■□□□□ 0.87
SPG7-207ENST00000563218 AHDC1Q5TGY3 1603 aaPredicted RBP20.49■□□□□ 0.87
SPG7-207ENST00000563218 ITGAEP38570 1179 aa20.48■□□□□ 0.87
SPG7-207ENST00000563218 PPARGC1BQ86YN6 1023 aaKnown RBP20.48■□□□□ 0.87
SPG7-207ENST00000563218 TBX22Q9Y458 520 aa20.48■□□□□ 0.87
SPG7-207ENST00000563218 NUP155O75694 1391 aa20.47■□□□□ 0.87
SPG7-207ENST00000563218 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
SPG7-207ENST00000563218 SETBP1Q9Y6X0 1596 aa20.46■□□□□ 0.87
SPG7-207ENST00000563218 KIF1BO60333 1816 aa20.46■□□□□ 0.87
SPG7-207ENST00000563218 NALCNQ8IZF0 1738 aa20.45■□□□□ 0.86
SPG7-207ENST00000563218 JCADQ9P266 1359 aa20.45■□□□□ 0.86
SPG7-207ENST00000563218 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
SPG7-207ENST00000563218 NCOA3Q9Y6Q9 1424 aa20.44■□□□□ 0.86
SPG7-207ENST00000563218 NHSL1Q5SYE7 1610 aa20.43■□□□□ 0.86
SPG7-207ENST00000563218 HDGFP51858 240 aaKnown RBP20.43■□□□□ 0.86
SPG7-207ENST00000563218 PIK3R4Q99570 1358 aa20.42■□□□□ 0.86
SPG7-207ENST00000563218 NEXMIFQ5QGS0 1516 aa20.42■□□□□ 0.86
SPG7-207ENST00000563218 C14orf37Q86TY3 774 aa20.41■□□□□ 0.86
SPG7-207ENST00000563218 AMOTL2Q9Y2J4 779 aa20.38■□□□□ 0.85
SPG7-207ENST00000563218 ASXL1Q8IXJ9 1541 aa20.37■□□□□ 0.85
SPG7-207ENST00000563218 CADPS2Q86UW7 1296 aa20.35■□□□□ 0.85
SPG7-207ENST00000563218 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
SPG7-207ENST00000563218 METP08581 1390 aa20.34■□□□□ 0.85
SPG7-207ENST00000563218 ATF3P18847 181 aa20.34■□□□□ 0.85
SPG7-207ENST00000563218 MST1RQ04912 1400 aa20.34■□□□□ 0.85
SPG7-207ENST00000563218 BRINP3Q76B58 766 aa20.33■□□□□ 0.85
SPG7-207ENST00000563218 PPLO60437 1756 aa20.32■□□□□ 0.84
SPG7-207ENST00000563218 DCCP43146 1447 aa20.32■□□□□ 0.84
SPG7-207ENST00000563218 ZNF326Q5BKZ1 582 aaKnown RBP20.31■□□□□ 0.84
SPG7-207ENST00000563218 SPATA31A6Q5VVP1 1343 aa20.3■□□□□ 0.84
SPG7-207ENST00000563218 NAIPQ13075 1403 aa20.29■□□□□ 0.84
SPG7-207ENST00000563218 RRBP1Q9P2E9 1410 aaKnown RBP20.29■□□□□ 0.84
SPG7-207ENST00000563218 MEX3CQ5U5Q3 659 aaKnown RBP20.28■□□□□ 0.84
SPG7-207ENST00000563218 ADGRL3Q9HAR2 1447 aa20.27■□□□□ 0.84
SPG7-207ENST00000563218 LAMC1P11047 1609 aa20.25■□□□□ 0.83
SPG7-207ENST00000563218 NUTM2BA6NNL0 878 aaPredicted RBP20.25■□□□□ 0.83
SPG7-207ENST00000563218 NUTM2EB1AL46 878 aaPredicted RBP20.25■□□□□ 0.83
SPG7-207ENST00000563218 NUTM2AQ8IVF1 878 aaPredicted RBP20.25■□□□□ 0.83
SPG7-207ENST00000563218 DDX17Q92841 729 aaKnown RBP20.25■□□□□ 0.83
SPG7-207ENST00000563218 SETD5Q9C0A6 1442 aa20.25■□□□□ 0.83
SPG7-207ENST00000563218 TRIM52Q96A61 297 aa20.24■□□□□ 0.83
SPG7-207ENST00000563218 IFT172Q9UG01 1749 aa20.22■□□□□ 0.83
SPG7-207ENST00000563218 ZNF772Q68DY9 489 aaPredicted RBP20.2■□□□□ 0.82
SPG7-207ENST00000563218 PNPLA6Q8IY17 1366 aa20.19■□□□□ 0.82
SPG7-207ENST00000563218 PTCH1Q13635 1447 aa20.19■□□□□ 0.82
SPG7-207ENST00000563218 C1orf167Q5SNV9 1468 aa20.18■□□□□ 0.82
SPG7-207ENST00000563218 AFF2P51816 1311 aa20.18■□□□□ 0.82
SPG7-207ENST00000563218 ROBO2Q9HCK4 1378 aa20.18■□□□□ 0.82
SPG7-207ENST00000563218 HFM1A2PYH4 1435 aa20.16■□□□□ 0.82
SPG7-207ENST00000563218 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
SPG7-207ENST00000563218 UPF1Q92900 1129 aaKnown RBP eCLIP20.15■□□□□ 0.823e-6■■■■□ 23.1
SPG7-207ENST00000563218 CDK12Q9NYV4 1490 aaPredicted RBP20.14■□□□□ 0.81
SPG7-207ENST00000563218 RGS12O14924 1447 aa20.14■□□□□ 0.81
SPG7-207ENST00000563218 COL22A1Q8NFW1 1626 aaPredicted RBP20.13■□□□□ 0.81
SPG7-207ENST00000563218 PRAG1Q86YV5 1406 aa20.13■□□□□ 0.81
SPG7-207ENST00000563218 RXRBP28702 533 aa20.13■□□□□ 0.81
SPG7-207ENST00000563218 KNDC1Q76NI1 1749 aa20.11■□□□□ 0.81
SPG7-207ENST00000563218 LRRC59Q96AG4 307 aaKnown RBP20.11■□□□□ 0.81
SPG7-207ENST00000563218 C8orf37Q96NL8 207 aa20.11■□□□□ 0.81
SPG7-207ENST00000563218 CDC42BPGQ6DT37 1551 aa20.11■□□□□ 0.81
SPG7-207ENST00000563218 ORAI2Q96SN7 254 aa20.1■□□□□ 0.81
SPG7-207ENST00000563218 RGPD8O14715 1765 aaPredicted RBP20.1■□□□□ 0.81
SPG7-207ENST00000563218 FOXD1Q16676 465 aa20.09■□□□□ 0.81
SPG7-207ENST00000563218 SLC4A1APQ9BWU0 796 aaKnown RBP20.08■□□□□ 0.81
SPG7-207ENST00000563218 VGFO15240 615 aaPredicted RBP20.07■□□□□ 0.8
SPG7-207ENST00000563218 ADAMTS2O95450 1211 aa20.06■□□□□ 0.8
SPG7-207ENST00000563218 FMN2Q9NZ56 1722 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms