RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 ANKRD50Q9ULJ7 1429 aa16.01■□□□□ 0.15
BBS4-205ENST00000562219 KCNA6P17658 529 aa16■□□□□ 0.15
BBS4-205ENST00000562219 SLC52A1Q9NWF4 448 aa16■□□□□ 0.15
BBS4-205ENST00000562219 SLC26A8Q96RN1 970 aa15.99■□□□□ 0.15
BBS4-205ENST00000562219 ZFYVE9O95405 1425 aa15.99■□□□□ 0.15
BBS4-205ENST00000562219 PHLPP1O60346 1717 aa15.99■□□□□ 0.15
BBS4-205ENST00000562219 E9PCH4 1651 aa15.99■□□□□ 0.15
BBS4-205ENST00000562219 FAM50AQ14320 339 aaKnown RBP15.96■□□□□ 0.15
BBS4-205ENST00000562219 PROSER2Q86WR7 435 aaPredicted RBP15.96■□□□□ 0.15
BBS4-205ENST00000562219 IQGAP3Q86VI3 1631 aa15.96■□□□□ 0.15
BBS4-205ENST00000562219 RGS17Q9UGC6 210 aaPredicted RBP15.95■□□□□ 0.14
BBS4-205ENST00000562219 MSH6P52701 1360 aa15.95■□□□□ 0.14
BBS4-205ENST00000562219 PLEKHG1Q9ULL1 1385 aa15.95■□□□□ 0.14
BBS4-205ENST00000562219 RIMS2Q9UQ26 1411 aa15.94■□□□□ 0.14
BBS4-205ENST00000562219 DIP2AQ14689 1571 aa15.93■□□□□ 0.14
BBS4-205ENST00000562219 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
BBS4-205ENST00000562219 BCANQ96GW7 911 aa15.93■□□□□ 0.14
BBS4-205ENST00000562219 COL16A1Q07092 1604 aaPredicted RBP15.91■□□□□ 0.14
BBS4-205ENST00000562219 PPP1R15AO75807 674 aaPredicted RBP15.9■□□□□ 0.14
BBS4-205ENST00000562219 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.9■□□□□ 0.14
BBS4-205ENST00000562219 HDGFP51858 240 aaKnown RBP15.89■□□□□ 0.13
BBS4-205ENST00000562219 ROCK1Q13464 1354 aa15.88■□□□□ 0.13
BBS4-205ENST00000562219 SETD1AO15047 1707 aaKnown RBP15.88■□□□□ 0.13
BBS4-205ENST00000562219 NCOA3Q9Y6Q9 1424 aa15.88■□□□□ 0.13
BBS4-205ENST00000562219 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
BBS4-205ENST00000562219 SLAIN2Q9P270 581 aa15.87■□□□□ 0.13
BBS4-205ENST00000562219 TRPM2O94759 1503 aa15.87■□□□□ 0.13
BBS4-205ENST00000562219 ADAMTS13Q76LX8 1427 aa15.86■□□□□ 0.13
BBS4-205ENST00000562219 SHPRHQ149N8 1683 aa15.86■□□□□ 0.13
BBS4-205ENST00000562219 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
BBS4-205ENST00000562219 TBX22Q9Y458 520 aa15.86■□□□□ 0.13
BBS4-205ENST00000562219 JCADQ9P266 1359 aa15.86■□□□□ 0.13
BBS4-205ENST00000562219 POTEAQ6S8J7 498 aa15.85■□□□□ 0.13
BBS4-205ENST00000562219 AHDC1Q5TGY3 1603 aaPredicted RBP15.85■□□□□ 0.13
BBS4-205ENST00000562219 PIK3R4Q99570 1358 aa15.85■□□□□ 0.13
BBS4-205ENST00000562219 XRN1Q8IZH2 1706 aaKnown RBP15.84■□□□□ 0.13
BBS4-205ENST00000562219 NRXN3Q9Y4C0 1643 aa15.83■□□□□ 0.13
BBS4-205ENST00000562219 CHGAP10645 457 aaKnown RBP15.83■□□□□ 0.12
BBS4-205ENST00000562219 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
BBS4-205ENST00000562219 SETBP1Q9Y6X0 1596 aa15.81■□□□□ 0.12
BBS4-205ENST00000562219 LRP6O75581 1613 aa15.8■□□□□ 0.12
BBS4-205ENST00000562219 NUP155O75694 1391 aa15.8■□□□□ 0.12
BBS4-205ENST00000562219 NUTM2DQ5VT03 806 aaPredicted RBP15.8■□□□□ 0.12
BBS4-205ENST00000562219 CADPS2Q86UW7 1296 aa15.79■□□□□ 0.12
BBS4-205ENST00000562219 SPATA31A6Q5VVP1 1343 aa15.78■□□□□ 0.12
BBS4-205ENST00000562219 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
BBS4-205ENST00000562219 NHSL1Q5SYE7 1610 aa15.78■□□□□ 0.12
BBS4-205ENST00000562219 KIF1BO60333 1816 aa15.78■□□□□ 0.12
BBS4-205ENST00000562219 DCCP43146 1447 aa15.77■□□□□ 0.12
BBS4-205ENST00000562219 ATF3P18847 181 aa15.77■□□□□ 0.12
BBS4-205ENST00000562219 PTPRUQ92729 1446 aa15.77■□□□□ 0.11
BBS4-205ENST00000562219 ASXL1Q8IXJ9 1541 aa15.75■□□□□ 0.11
BBS4-205ENST00000562219 NALCNQ8IZF0 1738 aa15.75■□□□□ 0.11
BBS4-205ENST00000562219 CLTCL1P53675 1640 aa15.75■□□□□ 0.11
BBS4-205ENST00000562219 AMOTL2Q9Y2J4 779 aa15.74■□□□□ 0.11
BBS4-205ENST00000562219 NEXMIFQ5QGS0 1516 aa15.73■□□□□ 0.11
BBS4-205ENST00000562219 ITGAEP38570 1179 aa15.72■□□□□ 0.11
BBS4-205ENST00000562219 MEX3CQ5U5Q3 659 aaKnown RBP15.72■□□□□ 0.11
BBS4-205ENST00000562219 MST1RQ04912 1400 aa15.7■□□□□ 0.1
BBS4-205ENST00000562219 ZNF772Q68DY9 489 aaPredicted RBP15.7■□□□□ 0.1
BBS4-205ENST00000562219 BRINP3Q76B58 766 aa15.7■□□□□ 0.1
BBS4-205ENST00000562219 METP08581 1390 aa15.69■□□□□ 0.1
BBS4-205ENST00000562219 SETD5Q9C0A6 1442 aa15.68■□□□□ 0.1
BBS4-205ENST00000562219 ADGRL3Q9HAR2 1447 aa15.68■□□□□ 0.1
BBS4-205ENST00000562219 ZNF326Q5BKZ1 582 aaKnown RBP15.68■□□□□ 0.1
BBS4-205ENST00000562219 LAMC1P11047 1609 aa15.67■□□□□ 0.1
BBS4-205ENST00000562219 CDK12Q9NYV4 1490 aaPredicted RBP15.65■□□□□ 0.1
BBS4-205ENST00000562219 PPLO60437 1756 aa15.65■□□□□ 0.1
BBS4-205ENST00000562219 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
BBS4-205ENST00000562219 TRIM52Q96A61 297 aa15.63■□□□□ 0.09
BBS4-205ENST00000562219 NAIPQ13075 1403 aa15.62■□□□□ 0.09
BBS4-205ENST00000562219 PTCH1Q13635 1447 aa15.62■□□□□ 0.09
BBS4-205ENST00000562219 NUTM2BA6NNL0 878 aaPredicted RBP15.62■□□□□ 0.09
BBS4-205ENST00000562219 NUTM2EB1AL46 878 aaPredicted RBP15.62■□□□□ 0.09
BBS4-205ENST00000562219 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
BBS4-205ENST00000562219 NUTM2AQ8IVF1 878 aaPredicted RBP15.62■□□□□ 0.09
BBS4-205ENST00000562219 PRAG1Q86YV5 1406 aa15.6■□□□□ 0.09
BBS4-205ENST00000562219 RXRBP28702 533 aa15.6■□□□□ 0.09
BBS4-205ENST00000562219 UPF1Q92900 1129 aaKnown RBP eCLIP15.6■□□□□ 0.09
BBS4-205ENST00000562219 LRRC59Q96AG4 307 aaKnown RBP15.6■□□□□ 0.09
BBS4-205ENST00000562219 AFF2P51816 1311 aa15.6■□□□□ 0.09
BBS4-205ENST00000562219 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
BBS4-205ENST00000562219 C1orf167Q5SNV9 1468 aa15.59■□□□□ 0.09
BBS4-205ENST00000562219 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
BBS4-205ENST00000562219 COL22A1Q8NFW1 1626 aaPredicted RBP15.57■□□□□ 0.08
BBS4-205ENST00000562219 MARF1Q9Y4F3 1742 aaKnown RBP15.57■□□□□ 0.08
BBS4-205ENST00000562219 ROBO2Q9HCK4 1378 aa15.56■□□□□ 0.08
BBS4-205ENST00000562219 HFM1A2PYH4 1435 aa15.56■□□□□ 0.08
BBS4-205ENST00000562219 RGS12O14924 1447 aa15.56■□□□□ 0.08
BBS4-205ENST00000562219 IFT172Q9UG01 1749 aa15.56■□□□□ 0.08
BBS4-205ENST00000562219 CDC42BPGQ6DT37 1551 aa15.55■□□□□ 0.08
BBS4-205ENST00000562219 VGFO15240 615 aaPredicted RBP15.55■□□□□ 0.08
BBS4-205ENST00000562219 C8orf37Q96NL8 207 aa15.55■□□□□ 0.08
BBS4-205ENST00000562219 RPGRIP1LQ68CZ1 1315 aa15.53■□□□□ 0.08
BBS4-205ENST00000562219 KNDC1Q76NI1 1749 aa15.51■□□□□ 0.07
BBS4-205ENST00000562219 SOS2Q07890 1332 aaPredicted RBP15.51■□□□□ 0.07
BBS4-205ENST00000562219 RBM6P78332 1123 aaKnown RBP15.51■□□□□ 0.07
BBS4-205ENST00000562219 QTRT2Q9H974 415 aaKnown RBP15.5■□□□□ 0.07
BBS4-205ENST00000562219 ADAMTS2O95450 1211 aa15.49■□□□□ 0.07
BBS4-205ENST00000562219 NGLY1Q96IV0 654 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms