RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 SEPT9Q9UHD8 586 aaPredicted RBP9.36□□□□□ -0.91
CNOT1-203ENST00000562046 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
CNOT1-203ENST00000562046 FAM98CQ17RN3 349 aaKnown RBP9.35□□□□□ -0.91
CNOT1-203ENST00000562046 SULF1Q8IWU6 871 aa9.35□□□□□ -0.91
CNOT1-203ENST00000562046 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
CNOT1-203ENST00000562046 DDX11L8A8MPP1 907 aa9.34□□□□□ -0.91
CNOT1-203ENST00000562046 MYSM1Q5VVJ2 828 aa9.34□□□□□ -0.91
CNOT1-203ENST00000562046 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.92
CNOT1-203ENST00000562046 SWT1Q5T5J6 900 aaKnown RBP9.33□□□□□ -0.92
CNOT1-203ENST00000562046 LAPTM4BQ86VI4 370 aa9.33□□□□□ -0.92
CNOT1-203ENST00000562046 TBC1D2Q9BYX2 928 aa9.33□□□□□ -0.92
CNOT1-203ENST00000562046 HRO43593 1189 aa9.32□□□□□ -0.92
CNOT1-203ENST00000562046 SLC10A3P09131 477 aa9.32□□□□□ -0.92
CNOT1-203ENST00000562046 ERICH6Q7L0X2 663 aa9.32□□□□□ -0.92
CNOT1-203ENST00000562046 SPIRE2Q8WWL2 714 aa9.32□□□□□ -0.92
CNOT1-203ENST00000562046 PCMTD1Q96MG8 357 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-203ENST00000562046 ADGRD1Q6QNK2 874 aa9.31□□□□□ -0.92
CNOT1-203ENST00000562046 NBPF3Q9H094 633 aa9.31□□□□□ -0.92
CNOT1-203ENST00000562046 DIXDC1Q155Q3 683 aa9.3□□□□□ -0.92
CNOT1-203ENST00000562046 PROCA1Q8NCQ7 364 aaPredicted RBP9.3□□□□□ -0.92
CNOT1-203ENST00000562046 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.3□□□□□ -0.92
CNOT1-203ENST00000562046 POLR3EQ9NVU0 708 aa9.29□□□□□ -0.92
CNOT1-203ENST00000562046 GCGRP47871 477 aa9.28□□□□□ -0.92
CNOT1-203ENST00000562046 SAMD7Q7Z3H4 446 aa9.28□□□□□ -0.92
CNOT1-203ENST00000562046 ZFRQ96KR1 1074 aaKnown RBP9.28□□□□□ -0.92
CNOT1-203ENST00000562046 CLK2P49760 499 aaKnown RBP9.27□□□□□ -0.93
CNOT1-203ENST00000562046 C14orf37Q86TY3 774 aa9.27□□□□□ -0.93
CNOT1-203ENST00000562046 RDH13Q8NBN7 331 aa9.27□□□□□ -0.93
CNOT1-203ENST00000562046 LIMD1Q9UGP4 676 aa9.27□□□□□ -0.93
CNOT1-203ENST00000562046 MOXD2PA6NHM9 499 aa9.26□□□□□ -0.93
CNOT1-203ENST00000562046 SPTLC1O15269 473 aa9.26□□□□□ -0.93
CNOT1-203ENST00000562046 TUSC1Q2TAM9 212 aa9.26□□□□□ -0.93
CNOT1-203ENST00000562046 NUTM1Q86Y26 1132 aa9.26□□□□□ -0.93
CNOT1-203ENST00000562046 MRPL50Q8N5N7 158 aaKnown RBP9.26□□□□□ -0.93
CNOT1-203ENST00000562046 KDM4AO75164 1064 aa9.25□□□□□ -0.93
CNOT1-203ENST00000562046 FBXO31Q5XUX0 539 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-203ENST00000562046 RSBN1LQ6PCB5 846 aaPredicted RBP9.25□□□□□ -0.93
CNOT1-203ENST00000562046 RIC3Q7Z5B4 369 aa9.25□□□□□ -0.93
CNOT1-203ENST00000562046 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
CNOT1-203ENST00000562046 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
CNOT1-203ENST00000562046 GJA5P36382 358 aa9.24□□□□□ -0.93
CNOT1-203ENST00000562046 HDGFP51858 240 aaKnown RBP9.24□□□□□ -0.93
CNOT1-203ENST00000562046 RSPH4AQ5TD94 716 aa9.24□□□□□ -0.93
CNOT1-203ENST00000562046 SLF2Q8IX21 1173 aa9.24□□□□□ -0.93
CNOT1-203ENST00000562046 NDUFV2P19404 249 aa9.23□□□□□ -0.93
CNOT1-203ENST00000562046 USP46P62068 366 aa9.23□□□□□ -0.93
CNOT1-203ENST00000562046 ANKRD13DQ6ZTN6 518 aa9.23□□□□□ -0.93
CNOT1-203ENST00000562046 PPP2R2DQ66LE6 453 aa9.22□□□□□ -0.93
CNOT1-203ENST00000562046 HOXA2O43364 376 aa9.21□□□□□ -0.94
CNOT1-203ENST00000562046 PCDHB15Q9Y5E8 787 aa9.2□□□□□ -0.94
CNOT1-203ENST00000562046 LILRB3O75022 631 aa9.19□□□□□ -0.94
CNOT1-203ENST00000562046 CFHP08603 1231 aa9.19□□□□□ -0.94
CNOT1-203ENST00000562046 SLC4A3P48751 1232 aa9.19□□□□□ -0.94
CNOT1-203ENST00000562046 LRCH3Q96II8 777 aa9.19□□□□□ -0.94
CNOT1-203ENST00000562046 RFC5P40937 340 aa9.18□□□□□ -0.94
CNOT1-203ENST00000562046 FLIIQ13045 1269 aa9.18□□□□□ -0.94
CNOT1-203ENST00000562046 QPCTQ16769 361 aa9.18□□□□□ -0.94
CNOT1-203ENST00000562046 HLA-CQ95604 372 aa9.18□□□□□ -0.94
CNOT1-203ENST00000562046 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.18□□□□□ -0.94
CNOT1-203ENST00000562046 PCDHGC3Q9UN70 934 aa9.18□□□□□ -0.94
CNOT1-203ENST00000562046 SOWAHBA6NEL2 793 aa9.17□□□□□ -0.94
CNOT1-203ENST00000562046 FUT2Q10981 343 aa9.17□□□□□ -0.94
CNOT1-203ENST00000562046 FDX1P10109 184 aa9.16□□□□□ -0.94
CNOT1-203ENST00000562046 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
CNOT1-203ENST00000562046 PRPF38BQ5VTL8 546 aaKnown RBP9.16□□□□□ -0.94
CNOT1-203ENST00000562046 ANKK1Q8NFD2 765 aa9.16□□□□□ -0.94
CNOT1-203ENST00000562046 RNF40O75150 1001 aa9.15□□□□□ -0.94
CNOT1-203ENST00000562046 MCM6Q14566 821 aa9.15□□□□□ -0.94
CNOT1-203ENST00000562046 ATP1B4Q9UN42 357 aaPredicted RBP9.15□□□□□ -0.94
CNOT1-203ENST00000562046 ACTN4O43707 911 aaKnown RBP9.14□□□□□ -0.95
CNOT1-203ENST00000562046 ATP6V1AP38606 617 aa9.14□□□□□ -0.95
CNOT1-203ENST00000562046 BCAMP50895 628 aa9.14□□□□□ -0.95
CNOT1-203ENST00000562046 CSPP1Q1MSJ5 1256 aa9.14□□□□□ -0.95
CNOT1-203ENST00000562046 RTL5Q5HYW3 569 aaPredicted RBP9.14□□□□□ -0.95
CNOT1-203ENST00000562046 NECTIN2Q92692 538 aa9.14□□□□□ -0.95
CNOT1-203ENST00000562046 ZMYND15Q9H091 742 aa9.14□□□□□ -0.95
CNOT1-203ENST00000562046 GOLGA8CPA6NN73 597 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 HRCP23327 699 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 KMT5BQ4FZB7 885 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 BANK1Q8NDB2 785 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 CABLES1Q8TDN4 633 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 WNT2BQ93097 391 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 STAC3Q96MF2 364 aa9.13□□□□□ -0.95
CNOT1-203ENST00000562046 GRIPAP1Q4V328 841 aa9.12□□□□□ -0.95
CNOT1-203ENST00000562046 TMEM259Q4ZIN3 620 aa9.12□□□□□ -0.95
CNOT1-203ENST00000562046 POTEGQ6S5H5 508 aa9.12□□□□□ -0.95
CNOT1-203ENST00000562046 HPS5Q9UPZ3 1129 aa9.12□□□□□ -0.95
CNOT1-203ENST00000562046 MORN1Q5T089 497 aa9.11□□□□□ -0.95
CNOT1-203ENST00000562046 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
CNOT1-203ENST00000562046 ZBTB3Q9H5J0 574 aa9.11□□□□□ -0.95
CNOT1-203ENST00000562046 TSR3Q9UJK0 312 aaKnown RBP9.11□□□□□ -0.95
CNOT1-203ENST00000562046 POTEMA6NI47 508 aa9.1□□□□□ -0.95
CNOT1-203ENST00000562046 SPDYE5A6NIY4 337 aa9.1□□□□□ -0.95
CNOT1-203ENST00000562046 APLP1P51693 650 aa9.1□□□□□ -0.95
CNOT1-203ENST00000562046 PPP4CP60510 307 aa9.1□□□□□ -0.95
CNOT1-203ENST00000562046 PUS10Q3MIT2 529 aaKnown RBP9.09□□□□□ -0.95
CNOT1-203ENST00000562046 PRR14Q9BWN1 585 aa9.09□□□□□ -0.95
CNOT1-203ENST00000562046 SNRKQ9NRH2 765 aa9.09□□□□□ -0.95
CNOT1-203ENST00000562046 NUTM2BA6NNL0 878 aaPredicted RBP9.08□□□□□ -0.96
CNOT1-203ENST00000562046 NUTM2EB1AL46 878 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms