RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 PKDCCQ504Y2 493 aa8.64□□□□□ -1.03
SNRPA1-209ENST00000560307 TOP2AP11388 1531 aaKnown RBP8.64□□□□□ -1.03
SNRPA1-209ENST00000560307 GOLGA3Q08378 1498 aa8.64□□□□□ -1.03
SNRPA1-209ENST00000560307 KIF21BO75037 1637 aa8.63□□□□□ -1.03
SNRPA1-209ENST00000560307 CRISPLD2Q9H0B8 497 aa8.63□□□□□ -1.03
SNRPA1-209ENST00000560307 RBM26Q5T8P6 1007 aaKnown RBP8.62□□□□□ -1.03
SNRPA1-209ENST00000560307 BARGINQ6ZT62 677 aa8.62□□□□□ -1.03
SNRPA1-209ENST00000560307 ANO8Q9HCE9 1232 aaPredicted RBP8.62□□□□□ -1.03
SNRPA1-209ENST00000560307 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.62□□□□□ -1.03
SNRPA1-209ENST00000560307 LOC100996750A0A140TA64 210 aa8.61□□□□□ -1.03
SNRPA1-209ENST00000560307 GPIHBP1Q8IV16 184 aa8.61□□□□□ -1.03
SNRPA1-209ENST00000560307 KRTAP4-6Q9BYQ5 205 aa8.61□□□□□ -1.03
SNRPA1-209ENST00000560307 BCL11AQ9H165 835 aa8.61□□□□□ -1.03
SNRPA1-209ENST00000560307 STK17AQ9UEE5 414 aa8.61□□□□□ -1.03
SNRPA1-209ENST00000560307 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
SNRPA1-209ENST00000560307 PPP4CP60510 307 aa8.6□□□□□ -1.03
SNRPA1-209ENST00000560307 FAM98CQ17RN3 349 aaKnown RBP8.6□□□□□ -1.03
SNRPA1-209ENST00000560307 TJAP1Q5JTD0 557 aa8.6□□□□□ -1.03
SNRPA1-209ENST00000560307 AK7Q96M32 723 aa8.6□□□□□ -1.03
SNRPA1-209ENST00000560307 SUPT16HQ9Y5B9 1047 aaKnown RBP8.6□□□□□ -1.03
SNRPA1-209ENST00000560307 GPBP1L1Q9HC44 474 aaPredicted RBP8.59□□□□□ -1.03
SNRPA1-209ENST00000560307 CECR2Q9BXF3 1484 aa8.58□□□□□ -1.04
SNRPA1-209ENST00000560307 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
SNRPA1-209ENST00000560307 IL21Q9HBE4 155 aa8.58□□□□□ -1.04
SNRPA1-209ENST00000560307 DAXXQ9UER7 740 aaPredicted RBP8.58□□□□□ -1.04
SNRPA1-209ENST00000560307 ARIH1Q9Y4X5 557 aaPredicted RBP8.58□□□□□ -1.04
SNRPA1-209ENST00000560307 BAZ1BQ9UIG0 1483 aaKnown RBP8.57□□□□□ -1.04
SNRPA1-209ENST00000560307 CAMK2BQ13554 666 aa8.57□□□□□ -1.04
SNRPA1-209ENST00000560307 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
SNRPA1-209ENST00000560307 YTHDC1Q96MU7 727 aaKnown RBP8.57□□□□□ -1.04
SNRPA1-209ENST00000560307 MTRQ99707 1265 aa8.57□□□□□ -1.04
SNRPA1-209ENST00000560307 LCE2AQ5TA79 106 aaPredicted RBP8.56□□□□□ -1.04
SNRPA1-209ENST00000560307 CEP164Q9UPV0 1460 aa8.56□□□□□ -1.04
SNRPA1-209ENST00000560307 SMARCA2P51531 1590 aa8.56□□□□□ -1.04
SNRPA1-209ENST00000560307 PCDHGA10Q9Y5H3 936 aa8.55□□□□□ -1.04
SNRPA1-209ENST00000560307 CCDC88BA6NC98 1476 aa8.55□□□□□ -1.04
SNRPA1-209ENST00000560307 ABCC8Q09428 1581 aa8.54□□□□□ -1.04
SNRPA1-209ENST00000560307 DPYSL4O14531 572 aa8.54□□□□□ -1.04
SNRPA1-209ENST00000560307 DGAT1O75907 488 aa8.54□□□□□ -1.04
SNRPA1-209ENST00000560307 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
SNRPA1-209ENST00000560307 ONECUT3O60422 494 aaPredicted RBP8.53□□□□□ -1.04
SNRPA1-209ENST00000560307 GGCXP38435 758 aa8.53□□□□□ -1.04
SNRPA1-209ENST00000560307 MAP3K9P80192 1104 aa8.52□□□□□ -1.05
SNRPA1-209ENST00000560307 ZNF516Q92618 1163 aa8.52□□□□□ -1.05
SNRPA1-209ENST00000560307 KDM4CQ9H3R0 1056 aa8.52□□□□□ -1.05
SNRPA1-209ENST00000560307 CUX2O14529 1486 aa8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 WFS1O76024 890 aa8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 INSM1Q01101 510 aaPredicted RBP8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 TYW1BQ6NUM6 668 aa8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 FBXW7Q969H0 707 aa8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 SMARCA4P51532 1647 aa8.51□□□□□ -1.05
SNRPA1-209ENST00000560307 FAM187AA6NFU0 413 aa8.5□□□□□ -1.05
SNRPA1-209ENST00000560307 TRIM66O15016 1216 aa8.49□□□□□ -1.05
SNRPA1-209ENST00000560307 PDE4DQ08499 809 aa8.49□□□□□ -1.05
SNRPA1-209ENST00000560307 TRIM67Q6ZTA4 783 aa8.49□□□□□ -1.05
SNRPA1-209ENST00000560307 SOGA1O94964 1423 aa8.48□□□□□ -1.05
SNRPA1-209ENST00000560307 NKX2-3Q8TAU0 364 aa8.48□□□□□ -1.05
SNRPA1-209ENST00000560307 SPDYE16A6NNV3 312 aaPredicted RBP8.47□□□□□ -1.05
SNRPA1-209ENST00000560307 EMILIN3Q9NT22 766 aa8.47□□□□□ -1.05
SNRPA1-209ENST00000560307 DHX57Q6P158 1386 aaKnown RBP8.47□□□□□ -1.05
SNRPA1-209ENST00000560307 ST8SIA5O15466 376 aa8.46□□□□□ -1.06
SNRPA1-209ENST00000560307 PDIA6Q15084 440 aa8.46□□□□□ -1.06
SNRPA1-209ENST00000560307 CLIP1P30622 1438 aa8.46□□□□□ -1.06
SNRPA1-209ENST00000560307 GRXCR2A6NFK2 248 aa8.45□□□□□ -1.06
SNRPA1-209ENST00000560307 PHF14O94880 888 aa8.45□□□□□ -1.06
SNRPA1-209ENST00000560307 NUTM2FA1L443 756 aa8.44□□□□□ -1.06
SNRPA1-209ENST00000560307 C6orf132Q5T0Z8 1188 aa8.44□□□□□ -1.06
SNRPA1-209ENST00000560307 SAMD7Q7Z3H4 446 aa8.44□□□□□ -1.06
SNRPA1-209ENST00000560307 RNF40O75150 1001 aa8.43□□□□□ -1.06
SNRPA1-209ENST00000560307 SLC19A1P41440 591 aa8.43□□□□□ -1.06
SNRPA1-209ENST00000560307 ZMYND15Q9H091 742 aa8.43□□□□□ -1.06
SNRPA1-209ENST00000560307 ERICH3Q5RHP9 1530 aa8.43□□□□□ -1.06
SNRPA1-209ENST00000560307 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
SNRPA1-209ENST00000560307 RRBP1Q9P2E9 1410 aaKnown RBP8.42□□□□□ -1.06
SNRPA1-209ENST00000560307 PEG3Q9GZU2 1588 aa8.42□□□□□ -1.06
SNRPA1-209ENST00000560307 TMUB1Q9BVT8 246 aa8.41□□□□□ -1.06
SNRPA1-209ENST00000560307 RUSC2Q8N2Y8 1516 aa8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 WIPF1O43516 503 aa8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 COPS2P61201 443 aa8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 RBM33Q96EV2 1170 aaKnown RBP8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 FAM117AQ9C073 453 aa8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 RSPH6AQ9H0K4 717 aa8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 AAASQ9NRG9 546 aa8.4□□□□□ -1.06
SNRPA1-209ENST00000560307 SYNJ1O43426 1573 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 FANCIQ9NVI1 1328 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 TNFRSF10AO00220 468 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 UBTFP17480 764 aaKnown RBP8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 PRR20EP86478 221 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 PRR20CP86479 221 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 PRR20DP86480 221 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 PRR20BP86481 221 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 PRR20AP86496 221 aa8.39□□□□□ -1.07
SNRPA1-209ENST00000560307 CCDC102AQ96A19 550 aa8.38□□□□□ -1.07
SNRPA1-209ENST00000560307 ARID3AQ99856 593 aa8.38□□□□□ -1.07
SNRPA1-209ENST00000560307 MINK1Q8N4C8 1332 aaPredicted RBP8.37□□□□□ -1.07
SNRPA1-209ENST00000560307 GPR37O15354 613 aa8.37□□□□□ -1.07
SNRPA1-209ENST00000560307 SPRYD7Q5W111 196 aa8.37□□□□□ -1.07
SNRPA1-209ENST00000560307 ZNF598Q86UK7 904 aaKnown RBP8.37□□□□□ -1.07
SNRPA1-209ENST00000560307 C11orf95C9JLR9 678 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms